Report stuck & aborted WU here please

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TheSwampDweller

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Message 11712 - Posted: 6 Mar 2006, 13:04:17 UTC

HOMSdt_homDB011_1dtj__340_108 Failed after 51 seconds on my cpu and after 30 seconds on another user's cpu.
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Jakob Paikin

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Message 11776 - Posted: 8 Mar 2006, 9:29:12 UTC

I just noticed this in my Boinc (5.2.13/Windows XP) log:

08/03/2006 10:15:28|rosetta@home|Unrecoverable error for result HOMSdt_homDB004_1dtj__352_542_1 (Forkert funktion. (0x1) - exit code 1 (0x1))

The text in () is partially Danish and means "(Wrong function (0x1) ..." or "(Incorrect function (0x1) ..."
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Zazie

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Message 11777 - Posted: 8 Mar 2006, 12:29:10 UTC
Last modified: 8 Mar 2006, 12:39:26 UTC

Hi, I just found out that out of 19 recently processed Rosetta WUs, 8 finished with an Unrecoverable error. Either they had the exit code -164 (0xffffff5c), that was for WUs

SHORTRELAX_1cg5B_333_14_0, ABINITac_hom018_2acy__337_5_0, HOMSti_homDB004_1tif__346_112_0, HBLR_1.0_1dcj_348_716_0.

Or they had the exit code -1073741819 (0xc0000005), which happened for results

ABINITsc_hom016_1scjB_322_87_1, HOMSdc_homDB003_1dcj__339_86_0, ABINITpt_hom003_1ptq__322_94_1, HBLR_1.0_2tif_348_5539_0.

This has ALWAYS happened while removing from the memory and proceeding to other project, so I suppose this should really be remedied by setting Leave in memory when preempted to YES. But I must say I'm pretty upset by having wasted such loads of processing time - and 165 worth of credit - because of some kind of an internal error of Rosetta's. No other BOINC projects are having these problems on my computer.
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Profile OhioDude

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Message 11779 - Posted: 8 Mar 2006, 12:40:13 UTC

Stuck at 1% for 67 hours:

HB_BARCODE_30_1scjB_347_827_0
Visit my websites honoring some of America's heroes:
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USS Bunch DE-694 / APD-79
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Chilcotin

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Message 11783 - Posted: 8 Mar 2006, 16:03:12 UTC

WU 9990980 stuck at 1% and aborted
WU 10012688 stuck at 1% and aborted
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Profile Nite Owl
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Message 11789 - Posted: 8 Mar 2006, 19:13:30 UTC
Last modified: 8 Mar 2006, 19:17:06 UTC

Now this one hurt...<bulging eyeballs here> I noticed that the "Percent Done" in BOINCView for WU HOMShz_homDB021_1hz6A_341_126_0 was stuck at 46.1% and the time "To Complete" was growing rather than decreasing. Upon going to the affected machine and after repeatedly attempting to view the graphics and being unable to, I aborted the WU. I sure hate to lose that much time (72.08 hours)!



Result ID 12580084
Name HOMShz_homDB021_1hz6A_341_126_0
Workunit 10092458
Created 5 Mar 2006 2:15:59 UTC
Sent 5 Mar 2006 16:08:13 UTC
Received 8 Mar 2006 17:49:58 UTC
Server state Over
Outcome Client error
Client state Computing
Exit status -197 (0xffffff3b)
Computer ID 53343
Report deadline 19 Mar 2006 16:08:13 UTC
CPU time 260384.32427
stderr out <core_client_version>5.2.13</core_client_version>
<message>aborted via GUI RPC
</message>
<stderr_txt>
# random seed: 3541785
# cpu_run_time_pref: 7200

</stderr_txt>


Validate state Invalid
Claimed credit 1094.68782677731
Granted credit 0
application version 4.82

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Profile ecafkid

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Message 11791 - Posted: 8 Mar 2006, 20:54:42 UTC

Here is another one

3/8/2006 1:23:13 PM|rosetta@home|Unrecoverable error for result HOMSdt_homDB030_1dtj__340_171_1 (Incorrect function. (0x1) - exit code 1 (0x1))

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Profile ecafkid

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Message 11792 - Posted: 8 Mar 2006, 20:54:46 UTC

Here is another one

3/8/2006 1:23:13 PM|rosetta@home|Unrecoverable error for result HOMSdt_homDB030_1dtj__340_171_1 (Incorrect function. (0x1) - exit code 1 (0x1))

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Profile ecafkid

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Message 11793 - Posted: 8 Mar 2006, 20:54:49 UTC

Here is another one

3/8/2006 1:23:13 PM|rosetta@home|Unrecoverable error for result HOMSdt_homDB030_1dtj__340_171_1 (Incorrect function. (0x1) - exit code 1 (0x1))

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Profile ecafkid

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Message 11794 - Posted: 8 Mar 2006, 20:56:06 UTC

That was wierd poested the same message three times never had that happen before.
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Grutte Pier [Wa Oars]~MAB The Frisian
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Message 11812 - Posted: 9 Mar 2006, 7:15:36 UTC
Last modified: 9 Mar 2006, 7:26:45 UTC

https://boinc.bakerlab.org/rosetta/result.php?resultid=12412131

Couldn't find an explanation in Wiki but I may have overlooked it.

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Hell-Mood

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Message 11855 - Posted: 10 Mar 2006, 13:35:19 UTC
Last modified: 10 Mar 2006, 13:41:19 UTC

i suspended work, so i could hibernate my Windoze.
after waking up my pc and hitting "always work" in the boinc manager(v 4.45), it said calculation error on the rosetta job. maybe the log can help to locate and remove that bug.
by the way: it's a great job, doin' research on proteins.


09.03.2006 00:44:15|rosetta@home|Starting result HBLR_1.0_1mky_332_3924_2 using rosetta version 4.82
09.03.2006 00:47:39|rosetta@home|Sending scheduler request to https://boinc.bakerlab.org/rosetta_cgi/cgi
09.03.2006 00:47:39|rosetta@home|Requesting 0 seconds of work, returning 1 results
09.03.2006 00:47:40|rosetta@home|Scheduler request to https://boinc.bakerlab.org/rosetta_cgi/cgi succeeded
09.03.2006 01:32:52||Suspending computation and network activity - user request
09.03.2006 01:32:52|rosetta@home|Pausing result HBLR_1.0_1mky_332_3924_2 (removed from memory)
09.03.2006 01:32:53|rosetta@home|Unrecoverable error for result HBLR_1.0_1mky_332_3924_2 ( - exit code -1073741819 (0xc0000005))
09.03.2006 01:32:53||request_reschedule_cpus: process exited
10.03.2006 14:27:30||Resuming computation and network activity
10.03.2006 14:27:30||request_reschedule_cpus: Resuming activities
10.03.2006 14:27:30|rosetta@home|Computation for result HBLR_1.0_1mky_332_3924_2 finished
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Profile Cureseekers~Kristof

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Message 11856 - Posted: 10 Mar 2006, 14:10:34 UTC

After 27 seconds:

Unrecoverable error for result HOMSdt_homDB027_1dtj__352_1825_1 (Incorrect function. (0x1) - exit code 1 (0x1))

On this page I saw the job had already an error at another computer
https://boinc.bakerlab.org/rosetta/workunit.php?wuid=10447424
(atm I haven't uploaded mine, I'll do this in a few hours)
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Profile dag
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Message 11995 - Posted: 14 Mar 2006, 2:25:58 UTC

In the last couple of days I've seen several hangs on my system. Too bad they don't automatically abort--I have to abort them manually. The bad part is they've sat there for a day or so taking up a slot, but not doing anything, until I abort them.

dag

2006-03-10 13:05:17 [rosetta@home] Unrecoverable error for result HOMSog_homDB015_1ogw__352_1003_0 (process exited with code 131 (0x83))
2006-03-10 13:05:20 [rosetta@home] Unrecoverable error for result HOMSn0_homDB004_1n0u__352_1003_0 (process exited with code 131 (0x83))
2006-03-10 19:31:16 [rosetta@home] Unrecoverable error for result HOMSdt_homDB009_1dtj__352_1783_2 (process exited with code 1 (0x1))
2006-03-12 10:35:27 [rosetta@home] Unrecoverable error for result HOMSti_homDB025_1tif__352_1208_1 (process exited with code 1 (0x1))
2006-03-12 20:55:21 [rosetta@home] Unrecoverable error for result HOMSdt_homDB003_1dtj__352_1942_2 (process exited with code 1 (0x1))
2006-03-13 02:18:27 [rosetta@home] Unrecoverable error for result HOMSdt_homDB009_1dtj__352_992_2 (process exited with code 1 (0x1))
2006-03-13 11:27:59 [rosetta@home] Unrecoverable error for result HOMSn0_homDB017_1n0u__352_1447_0 (aborted by user)
2006-03-13 15:33:04 [rosetta@home] Unrecoverable error for result FA_RLXce_hom004_1cei__360_79_0 (process got signal 11)
2006-03-13 15:33:08 [rosetta@home] Unrecoverable error for result FA_RLXbg_hom001_1bgf__359_105_0 (process got signal 11)
2006-03-13 18:18:25 [rosetta@home] Unrecoverable error for result FA_RLXb3_hom012_1b3aA_359_81_0 (aborted by user)

dag
--Finding aliens is cool, but understanding the structure of proteins is useful.
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David Baker
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Message 11999 - Posted: 14 Mar 2006, 4:31:45 UTC - in response to Message 11998.  

I'm having major problems with the WU's that start with FA_RLX. They are either getting stuck at 1% or they run until 90 - 95% and error.


are these failing with much higher frequency than other WU on your computer?
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arklms

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Message 12008 - Posted: 14 Mar 2006, 12:51:42 UTC - in response to Message 8741.  
Last modified: 14 Mar 2006, 12:54:28 UTC

SSFEATURES_BARCODE_ABINITIO_5croA_334_286_0
9 hours 1%. This seems to happen a lot on this P3.

Can't get it to run via command line either, the window just closes.
Looks like I'll have to abort it.
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Team TMR

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Message 12009 - Posted: 14 Mar 2006, 13:06:33 UTC
Last modified: 14 Mar 2006, 13:07:59 UTC

Had 3 today that have been stuck on 1% after anything between 3-16 hours (runtime set to 2 hours).

3.1 hours:
https://boinc.bakerlab.org/rosetta/workunit.php?wuid=11019262

4.3 hours:
https://boinc.bakerlab.org/rosetta/workunit.php?wuid=11008654

16.9 hours:
https://boinc.bakerlab.org/rosetta/workunit.php?wuid=10949277

All were aborted.
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Profile hob.
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Message 12025 - Posted: 14 Mar 2006, 23:30:52 UTC

3/4/2006 6:51:19 AM|rosetta@home|Starting result ABINITli_hom010_1lis__322_14_1 using rosetta version 482


this job has been running for over 10 12 days now.........it's been on 84.89% for at least 24 hrs now.......maybe a lot longer ?? its still using cpu power so i assume it's doing something ?? runtime is listed as 256 12 hours so far...and still counting up

any advice as to what to do with it would be welcome.
46 years dc so far

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AMD_is_logical

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Message 12037 - Posted: 15 Mar 2006, 5:05:55 UTC - in response to Message 12025.  

3/4/2006 6:51:19 AM|rosetta@home|Starting result ABINITli_hom010_1lis__322_14_1 using rosetta version 482


this job has been running for over 10 12 days now.........it's been on 84.89% for at least 24 hrs now.......maybe a lot longer ?? its still using cpu power so i assume it's doing something ?? runtime is listed as 256 12 hours so far...and still counting up

any advice as to what to do with it would be welcome.

You could try stopping boinc, waiting a minute, then restarting boinc. That could get the WU going again.
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AMD_is_logical

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Message 12055 - Posted: 15 Mar 2006, 15:46:19 UTC

I just had a WU stuck at 23%. It was using CPU but wasn't making any progress. I stopped and restarted boinc and it finished normally.

WU: FA_RLXbq_hom006_1bq9A_359_221_0
Result: https://boinc.bakerlab.org/rosetta/result.php?resultid=13655767
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Message boards : Number crunching : Report stuck & aborted WU here please



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