Message boards : Number crunching : Problems and Technical Issues with Rosetta@home
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Grant (SSSF) Send message Joined: 28 Mar 20 Posts: 1729 Credit: 18,451,410 RAC: 20,088 |
Finally got my machine to start downloading tasks again (Problem at Boincstats) and now everything it's downloading is failing after a short computation time. Is there a way around this issue?As mentioned a few posts earlier, the majority of the new Tasks will error out in a few seconds, but the rest will run OK. As it is, it looks like that batch has all been sent out, so it'll just be resends again until another larger batch of work is released. NB- since you are running more than one project, i would suggest reducing your cache size to a half day or less. At times like these where Rosetta is out of work, your system will do just Einstein, when Rosetta gets more work then it will do more of Rosetta until your Resource share settings are being met. No need to cache work. eg Computing preferences, Other, Store at least 0.4 days of work Store up to an additional 0.01 days of work Grant Darwin NT |
robertmiles Send message Joined: 16 Jun 08 Posts: 1234 Credit: 14,338,560 RAC: 1,496 |
Finally got my machine to start downloading tasks again (Problem at Boincstats) and now everything it's downloading is failing after a short computation time. Is there a way around this issue? Errors after very short computation times are usually due to errors in one of the input files. In that case, not much can be done except to have the project staff cancel every task that shares the defective input file. Getting them to notice the need to do do is usually quite difficult. I saw two of the last batch I got fail quickly, but the other five have been running for an hour. This may mean that they have filtered out some, but not all, of the tasks with defective inputs. |
TribbleRED Send message Joined: 24 Jun 10 Posts: 2 Credit: 28,020,519 RAC: 4,717 |
Thank you Grant. I'll give it a go |
Albert H. Send message Joined: 31 Jan 14 Posts: 2 Credit: 8,917,754 RAC: 59 |
HI, Since 3 days no new tasks, is there a problem on my side ? 08/08/2021 11:13:17 | Rosetta@home | Project requested delay of 31 seconds 08/08/2021 11:13:52 | Rosetta@home | Sending scheduler request: To fetch work. 08/08/2021 11:13:52 | Rosetta@home | Requesting new tasks for CPU 08/08/2021 11:13:53 | Rosetta@home | Scheduler request completed: got 0 new tasks 08/08/2021 11:13:53 | Rosetta@home | No tasks sent 08/08/2021 11:13:53 | Rosetta@home | Project requested delay of 31 seconds 08/08/2021 11:28:33 | Rosetta@home | Sending scheduler request: To fetch work. 08/08/2021 11:28:33 | Rosetta@home | Requesting new tasks for CPU 08/08/2021 11:28:34 | Rosetta@home | Scheduler request completed: got 0 new tasks 08/08/2021 11:28:34 | Rosetta@home | No tasks sent Thanks Albert H. |
Grant (SSSF) Send message Joined: 28 Mar 20 Posts: 1729 Credit: 18,451,410 RAC: 20,088 |
HI,The project is presently out of work. There are some resends, and a couple of small batches of work being released, but it's down to luck as to whether you get any or not. Hopefully come the start of the new work week in the US more work will be loaded up at some stage and will be readily available. Grant Darwin NT |
Kissagogo27 Send message Joined: 31 Mar 20 Posts: 86 Credit: 2,981,693 RAC: 1,845 |
i got only resent ^^ and some GB10_3CL errored out too, |
Sid Celery Send message Joined: 11 Feb 08 Posts: 2144 Credit: 41,550,899 RAC: 9,975 |
Since 3 days no new tasks, is there a problem on my side ?The project is presently out of work. I managed to get 2.64 seconds total runtime from my last 40 errored tasks #Blessed Time to give WCG its head until they fix it - sometime whenever |
Stevie G Send message Joined: 15 Dec 18 Posts: 108 Credit: 866,895 RAC: 686 |
I also had nothing from Roseta for almost a week. Then I got a string or tasks that worked out as "errors while computing." Must be something amiss with the new setup? S. Gaber |
[VENETO] boboviz Send message Joined: 1 Dec 05 Posts: 2002 Credit: 9,790,281 RAC: 4,437 |
I also had nothing from Roseta for almost a week. Then I got a string or tasks that worked out as "errors while computing." No work here and problems on Ralph Seems: "Closed for holiday" :-P |
Admin Project administrator Send message Joined: 1 Jul 05 Posts: 5144 Credit: 0 RAC: 0 |
I've notified the researcher that submitted the jobs that are failing. We are looking into the HTTP download issues at the moment. |
xroule Send message Joined: 9 Feb 15 Posts: 4 Credit: 59,082,533 RAC: 8,918 |
Not a new problem. It often and it last many days. Not very serious! :-( I had to go back to W,C,G. |
robertmiles Send message Joined: 16 Jun 08 Posts: 1234 Credit: 14,338,560 RAC: 1,496 |
Not a new problem. It often and it last many days. Not very serious! :-( W.C.G. is now almost out of tasks, so you may need to add another project. |
xroule Send message Joined: 9 Feb 15 Posts: 4 Credit: 59,082,533 RAC: 8,918 |
I have lots of WCG w.u. in store. And yes I can join an other project. I can stop crunching altogether. All that does not solve the fact that this project runs out of W.U. just too often without explanation. That show how much they care about the crunchers. And no I do not know who (they) are. |
dcdc Send message Joined: 3 Nov 05 Posts: 1832 Credit: 119,860,059 RAC: 5,566 |
Their job is to do research, not to create meaningless work, so sometimes there is down-time. It is especially understandable at the moment with such big improvements being made in the field since AlphaFold 2's showing at CASP13 and more recently, since releasing their source code. It would be good to have more information posted about what is happening behind the scenes and the different versions of Rosetta though, especially the vbox versions. |
Albert H. Send message Joined: 31 Jan 14 Posts: 2 Credit: 8,917,754 RAC: 59 |
I got lots of work at the moment. Albert |
UBT - wbiz Send message Joined: 5 Feb 21 Posts: 6 Credit: 968,608 RAC: 15 |
Their job is to do research, not to create meaningless work, so sometimes there is down-time. I thought RoseTTAFold was one step ahead of AlphaFold 2 now? |
dcdc Send message Joined: 3 Nov 05 Posts: 1832 Credit: 119,860,059 RAC: 5,566 |
I don't think so - I think RoseTTaFold was closing the gap, but the reality is probably more complicated than that. I would guess that there are lots of areas where the are differences, like training improving the training, as well as the modelling. |
Grant (SSSF) Send message Joined: 28 Mar 20 Posts: 1729 Credit: 18,451,410 RAC: 20,088 |
And it looks like we're out of work again. Grant Darwin NT |
Greg_BE Send message Joined: 30 May 06 Posts: 5691 Credit: 5,859,226 RAC: 0 |
Tasks ready to send 0 Tasks in progress 169215 And now that it is the weekend, nothing will change. RAH is beginning to make me wonder if its stable or not. Bugs, no work for days, etc. This is not the RAH I started with. |
Cobra Send message Joined: 9 Nov 05 Posts: 7 Credit: 16,618,655 RAC: 974 |
Tasks ready to send 0 We've been told to expect periods of down time. It's even at the top of the project home page. https://boinc.bakerlab.org/rosetta/forum_thread.php?id=14290 https://boinc.bakerlab.org/rosetta/ |
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Problems and Technical Issues with Rosetta@home
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