Message boards : Number crunching : Problems with minirosetta version 1.+
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Author | Message |
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par Send message Joined: 3 May 07 Posts: 3 Credit: 128,191 RAC: 0 |
Is it possible that minirosetta is incompatable with older boinc managers or when running as a service? My home machine runs boinc as a service and my office machine runs boinc as a user. The home machine has the 5.4 manager and the office maching is running 5.10. I got my first minirosetta unit at home. It would not start running and would not terminate from task manager nor allow me to launch any new programs. I could not log off or restart. I had to suspend the unit and then pull the plug for the computer. I checked the office and the minirosetta units seem to be processing fine. |
Sid Celery Send message Joined: 11 Feb 08 Posts: 2146 Credit: 41,570,180 RAC: 6,141 |
New user here who only used v5.93 a few days before minirosetta 1.07 came down. I was going to post to say progress wasn't moving at all, but just as I was about to post it jumped up by 18.xx% then stuck again. It doesn't tick up in the way I was seeing with v5.93 - just big jumps. Also, using Norton 360 here. No false positives about viruses (Norton actually has the best record of all AVs on that score) |
Stan Wells Send message Joined: 24 Jan 06 Posts: 11 Credit: 1,723,723 RAC: 0 |
Back again - all minirosetta work units working well on WinXP machine - no problem with AVG anti-virus. Five minirosetta work units have now hung on the Linux box - all of them at just under the hour mark. stan |
Stan Wells Send message Joined: 24 Jan 06 Posts: 11 Credit: 1,723,723 RAC: 0 |
Noted that the 5 work units hung at just under an hour were all the "score13_hb_envtest62_A_lcg5B_xxxx" series -don't know if there is a pattern here, but I will watch it. Also noted is that I had my preferences on this computer set to switch between projects at 60 minutes. It has never switched, but thought I would change it to 120 minutes to test if that has an effect on the fail rate. also, anyone want to explain what I am supposed to do to these - they don't seem to want to start back up again after a suspend. stan |
[VENETO] Wizard83 Send message Joined: 2 May 07 Posts: 2 Credit: 3,196,669 RAC: 146 |
after a few hours that the mini-rosette client runs, the computer gets stuck and I must manually restart it. |
sslickerson Send message Joined: 14 Oct 05 Posts: 101 Credit: 578,497 RAC: 0 |
This WU=141716683 completed *1* decoy in 50,720 seconds (~14 hours). The WU was immediately tagged finished given that 2 decoys would have taken approx. 28 hours and my time limit for each WU is 24 hours. I'm not sure if this is a problem but it seems very strange to me. |
M.L. Send message Joined: 21 Nov 06 Posts: 182 Credit: 180,462 RAC: 0 |
My last few tasks! AMD 4800 dual core, W.XP. 141703246 129097012 18 Feb 2008 7:52:50 UTC 21 Feb 2008 8:14:14 UTC Over Success Done 8,955.58 37.50 23.35 141702622 129056759 18 Feb 2008 7:48:40 UTC 21 Feb 2008 6:48:22 UTC Over Success Done 12,047.23 50.45 35.71 141680190 129076351 18 Feb 2008 5:28:00 UTC 21 Feb 2008 6:48:22 UTC Over Success Done 11,533.53 48.30 35.71 141661569 129059218 18 Feb 2008 3:22:49 UTC 21 Feb 2008 4:07:42 UTC Over Success Done 7,383.70 30.92 16.47 141648691 129047997 18 Feb 2008 1:58:54 UTC 21 Feb 2008 0:27:22 UTC Over Success Done 10,625.06 44.49 31.64 141640562 129040790 18 Feb 2008 1:04:43 UTC 20 Feb 2008 23:48:57 UTC Over Success Done 10,178.97 42.62 29.26 141629359 129030416 17 Feb 2008 23:50:28 UTC 20 Feb 2008 21:14:11 UTC Over Success Done 10,408.38 43.59 30.87 141628647 129029811 17 Feb 2008 23:46:19 UTC 20 Feb 2008 16:51:08 UTC Over Success Done 7,252.38 30.37 19.48 141620134 128909880 17 Feb 2008 22:50:23 UTC 20 Feb 2008 16:51:08 UTC Over Success Done 8,741.13 36.60 24.68 141619408 129021418 17 Feb 2008 22:46:13 UTC 20 Feb 2008 16:51:08 UTC Over Success Done 13,753.23 57.59 41.11 All are Mini tasks.. |
TomaszPawel Send message Joined: 28 Apr 07 Posts: 54 Credit: 2,791,145 RAC: 0 |
Hi https://boinc.bakerlab.org/rosetta/result.php?resultid=141445600 https://boinc.bakerlab.org/rosetta/result.php?resultid=139389351 https://boinc.bakerlab.org/rosetta/result.php?resultid=139323708 Could someone tell me why i have this errors? |
caesar1987 Send message Joined: 28 Nov 06 Posts: 13 Credit: 22,268 RAC: 0 |
today my boinc get to monirosetta.. but i cant see graphics (by screensaver i have only boinc logo and text runing rosetta...) how can i go back to old rosetta? |
Ian_D Send message Joined: 21 Sep 05 Posts: 55 Credit: 4,216,173 RAC: 0 |
today my boinc get to monirosetta.. but i cant see graphics (by screensaver i have only boinc logo and text runing rosetta...) how can i go back to old rosetta? Try this explanation From the above link the new version of rosetta is extremely powerful, but as it is very new, there are still some rare problems surfacing, and some of the bells and whistles, such as the screensaver, are not yet in place. Other "older" applications (Rosetta Beta 5.93 / Rosetta 5.82) are still in the mix so just abort the mini's or just let them run through to completion, your choice. |
caesar1987 Send message Joined: 28 Nov 06 Posts: 13 Credit: 22,268 RAC: 0 |
Try this explanationthx... =) |
dcdc Send message Joined: 3 Nov 05 Posts: 1832 Credit: 119,860,059 RAC: 2,520 |
out of curiosity, what's the minirosetta database file? |
DemRo Send message Joined: 18 Jan 08 Posts: 1 Credit: 20,694 RAC: 0 |
When rosetta beta was replaced by minirosetta I counted 42 failed tasks (and 0 success) with "maximum memory exceed" error. I hope this errors are just temporary effect and soon they will be fixed. |
M.L. Send message Joined: 21 Nov 06 Posts: 182 Credit: 180,462 RAC: 0 |
Task ID 145897568 Name score12_hb_envtest62_A_1tig__2935_19641_0 Workunit 133002633 Created 5 Mar 2008 18:28:56 UTC Sent 5 Mar 2008 18:29:28 UTC Received 7 Mar 2008 19:29:34 UTC Server state Over Outcome Client error Client state Compute error Exit status 1 (0x1) Computer ID 735230 Report deadline 15 Mar 2008 18:29:28 UTC CPU time 2055.751 stderr out <core_client_version>5.10.30</core_client_version> <![CDATA[ <message> Incorrect function. (0x1) - exit code 1 (0x1) </message> <stderr_txt> Graphics are disabled due to configuration... # cpu_run_time_pref: 14400 Graphics are disabled due to configuration... Graphics are disabled due to configuration... error: cannot delete old ./minirosetta_database/scoring/weights/dna.wts error: cannot delete old ./minirosetta_database/scoring/weights/beta_soft_rep.wts error: cannot delete old ./minirosetta_database/scoring/weights/gen_born.wts error: cannot delete old ./minirosetta_database/scoring/weights/ligand_soft_rep_gen_born.wts error: cannot delete old ./minirosetta_database/scoring/weights/score5.wts ERROR: Unable to open weights. Neither ./score5 nor minirosetta_databasescoring/weights/score5.wtsexist ERROR:: Exit from: ....srccorescoringScoreFunctionFactory.cc line: 57 called boinc_finish </stderr_txt> ]]> Validate state Invalid Claimed credit 8.46439133129388 Granted credit 0 application version 1.07 Home | Join | About | Participants | Community | Statistics |
M.L. Send message Joined: 21 Nov 06 Posts: 182 Credit: 180,462 RAC: 0 |
Not sure what happened with these two tasks> Task ID 145928336 Name score12_hb_envtest62_A_1a19A_2935_24190_0 Workunit 133029909 Created 5 Mar 2008 21:34:09 UTC Sent 5 Mar 2008 21:34:50 UTC Received 7 Mar 2008 19:38:37 UTC Server state Over Outcome Client error Client state Compute error Exit status 0 (0x0) Computer ID 735230 Report deadline 15 Mar 2008 21:34:50 UTC CPU time 12.98438 stderr out <core_client_version>5.10.30</core_client_version> <![CDATA[ <stderr_txt> Graphics are disabled due to configuration... Graphics are disabled due to configuration... Graphics are disabled due to configuration... No heartbeat from core client for 30 sec - exiting Graphics are disabled due to configuration... Graphics are disabled due to configuration... Too many restarts with no progress. Keep application in memory while preempted. ====================================================== DONE :: 1 starting structures 12.3906 cpu seconds This process generated 0 decoys from 0 attempts ====================================================== BOINC :: BOINC support services shutting down... called boinc_finish </stderr_txt> <message> <file_xfer_error> <file_name>score12_hb_envtest62_A_1a19A_2935_24190_0_0</file_name> <error_code>-161</error_code> </file_xfer_error> </message> ]]> Validate state Invalid Claimed credit 0.0534621525244184 Granted credit 0 application version 1.07 |
mike46360 Send message Joined: 21 May 07 Posts: 10 Credit: 18,011 RAC: 0 |
I noticed I'm getting more Mini jobs..how far out is a graphics version? Any time lines? |
Klimax Send message Joined: 27 Apr 07 Posts: 44 Credit: 2,800,788 RAC: 23 |
I noticed I'm getting more Mini jobs..how far out is a graphics version? Any time lines? Mini with graphic(simple) is just on RAPLH in testing... |
M.L. Send message Joined: 21 Nov 06 Posts: 182 Credit: 180,462 RAC: 0 |
Re msg 51846 &51845. Just realised that at the time these two tasks were running I was attacked by -MONARONADONA-. Tech support at my ISP had to intervene and run their own cleaner, hopefully am now clean. |
Alan Roberts Send message Joined: 7 Jun 06 Posts: 61 Credit: 6,901,926 RAC: 0 |
Just noticed three of my herd had stopped responding. Checked and found them stuck on MiniRosetta 1.07/1.09s, with either zero percent of job completed (after several days of elapsed), or stuck at 2-4% (again after several days). Aborted WUs are: 132872148, 133115230, and 135200312. The machines are all dual-CPU Xeons, Win2K Server. Unfortunately I don't have time to chase this thread right now ... If there is some action I need to take for a fix can somebody point me at the details? Thanks, Alan |
Paul Send message Joined: 29 Oct 05 Posts: 193 Credit: 66,607,712 RAC: 3,594 |
What happened to Mini? I had hundreds of WUs a few weeks ago and now I have none. Did mini go back to Ralph for a while? When should we expect to see it again? Thx! Paul |
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Number crunching :
Problems with minirosetta version 1.+
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