Energy vs rmsd plots

Message boards : Rosetta@home Science : Energy vs rmsd plots

To post messages, you must log in.

1 · 2 · Next

AuthorMessage
Profile David E K
Volunteer moderator
Project administrator
Project developer
Project scientist

Send message
Joined: 1 Jul 05
Posts: 1018
Credit: 4,334,829
RAC: 0
Message 28985 - Posted: 6 Oct 2006, 20:20:24 UTC
Last modified: 6 Oct 2006, 20:20:37 UTC

You can now view energy vs rmsd plots for active work units. To view your results, click on the "Results" link under "Returning participants" on the home page. To view results from the top users, hosts, and teams, click on the "Rank" numbers on the respective leader lists. The data gets updated daily.

We'd like to thank Stuart Ozer from Microsoft Research for helping us develop this feature.

Please post comments, questions, and suggestions here.
ID: 28985 · Rating: 1 · rate: Rate + / Rate - Report as offensive    Reply Quote
zombie67 [MM]
Avatar

Send message
Joined: 11 Feb 06
Posts: 316
Credit: 6,585,904
RAC: 6,630
Message 28988 - Posted: 6 Oct 2006, 20:58:42 UTC - in response to Message 28985.  

Please post comments, questions, and suggestions here.


One of my results listed is boxed in dark gray. What's the significance?
Reno, NV
Team: SETI.USA
ID: 28988 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Profile David E K
Volunteer moderator
Project administrator
Project developer
Project scientist

Send message
Joined: 1 Jul 05
Posts: 1018
Credit: 4,334,829
RAC: 0
Message 28989 - Posted: 6 Oct 2006, 21:06:53 UTC

results are highlighted if your lowest rmsd or score is the lowest of all predictions for the particular work unit. The lists are sorted by the difference between your lowest rmsd and the lowest from everyone by default.
ID: 28989 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Profile Hoelder1in
Avatar

Send message
Joined: 30 Sep 05
Posts: 169
Credit: 3,915,947
RAC: 0
Message 28991 - Posted: 6 Oct 2006, 21:23:47 UTC - in response to Message 28985.  
Last modified: 6 Oct 2006, 21:58:49 UTC

You can now view energy vs rmsd plots for active work units. To view your results, click on the "Results" link under "Returning participants" on the home page. To view results from the top users, hosts, and teams, click on the "Rank" numbers on the respective leader lists. The data gets updated daily.

We'd like to thank Stuart Ozer from Microsoft Research for helping us develop this feature.

Please post comments, questions, and suggestions here.
WOW, great - thanks to all who worked on this ! However, there seem to be "%00"s interspersed between all the characters of the BatchID and SubBatchName string and I need to remove them manually for the query to work:

https://boinc.bakerlab.org/rosetta/rah_results.php?BatchID=%001%002%005%002%00&
SubBatchName=%001%00u%00t%00g%00_%00_%00B%00O%00I%00N%00C%00_%00F%00I%00L%00T%00E%00R
%00S%00_%00A%00B%00R%00E%00L%00A%00X%00_%00S%00A%00V%00E%00_%00A%00L%00L%00_%00
O%00U%00T%00_%00f%00r%00a%00g%00s%008%003%00_%00&UserID=2080

EDIT: line breaks added
Team betterhumans.com - discuss and celebrate the future - hoelder1in.org
ID: 28991 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
charmed

Send message
Joined: 2 Nov 05
Posts: 11
Credit: 1,780,440
RAC: 0
Message 28993 - Posted: 6 Oct 2006, 22:00:00 UTC - in response to Message 28991.  

Mine looks like a bunch of gobblety gook as well.
ID: 28993 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Profile David E K
Volunteer moderator
Project administrator
Project developer
Project scientist

Send message
Joined: 1 Jul 05
Posts: 1018
Credit: 4,334,829
RAC: 0
Message 28994 - Posted: 6 Oct 2006, 22:15:18 UTC

that's odd. can you send me the html source where you are seeing this? dekim at u dot washington dot edu
ID: 28994 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
BennyRop

Send message
Joined: 17 Dec 05
Posts: 555
Credit: 140,800
RAC: 0
Message 28996 - Posted: 6 Oct 2006, 23:29:10 UTC

Using Firefox to view

https://boinc.bakerlab.org/rosetta/rah_results.php?UserID=38837

I get boxes between each character under the Active Work Units using FF; while the same page under IE 6 sp1 looks fine.

So the M$ guy has hamstrung the page for anyone that's not using a M$ product. *grin*
ID: 28996 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Profile David E K
Volunteer moderator
Project administrator
Project developer
Project scientist

Send message
Joined: 1 Jul 05
Posts: 1018
Credit: 4,334,829
RAC: 0
Message 28997 - Posted: 6 Oct 2006, 23:40:46 UTC

I think I fixed it. Let me know if anyone is still having this problem. It was an issue with the text data returned from the report server.
ID: 28997 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Profile Hoelder1in
Avatar

Send message
Joined: 30 Sep 05
Posts: 169
Credit: 3,915,947
RAC: 0
Message 28998 - Posted: 7 Oct 2006, 0:00:18 UTC - in response to Message 28997.  

I think I fixed it. Let me know if anyone is still having this problem. It was an issue with the text data returned from the report server.
Yes, it's ok now on firefox - thanks, -H.

Team betterhumans.com - discuss and celebrate the future - hoelder1in.org
ID: 28998 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Daral

Send message
Joined: 13 Jan 06
Posts: 13
Credit: 870,334
RAC: 0
Message 28999 - Posted: 7 Oct 2006, 1:56:00 UTC

Very cool feature. I like.
ID: 28999 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
AlphaLaser

Send message
Joined: 19 Aug 06
Posts: 52
Credit: 3,327,939
RAC: 0
Message 29001 - Posted: 7 Oct 2006, 2:52:28 UTC

Wow! The graphs are awesome!
ID: 29001 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Evan

Send message
Joined: 23 Dec 05
Posts: 268
Credit: 402,585
RAC: 0
Message 29003 - Posted: 7 Oct 2006, 8:24:39 UTC

Very impressive. A bit like playing battleships. One near miss, but a lot way off the board.
ID: 29003 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
S@NL - EJG

Send message
Joined: 17 Sep 05
Posts: 2
Credit: 168,029
RAC: 0
Message 29006 - Posted: 7 Oct 2006, 11:49:26 UTC

A very, very nice feature! Thanks to everyone who worked on this.
ID: 29006 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Profile EdMulock
Avatar

Send message
Joined: 14 Mar 06
Posts: 30
Credit: 2,347,485
RAC: 0
Message 29044 - Posted: 8 Oct 2006, 16:04:59 UTC

Displays just fine on my Firefox 1.5.0.7 Nice work.
ID: 29044 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
AlphaLaser

Send message
Joined: 19 Aug 06
Posts: 52
Credit: 3,327,939
RAC: 0
Message 29061 - Posted: 8 Oct 2006, 22:33:13 UTC - in response to Message 29044.  

Oh yeah, I was wondering if any data on that page will be lost when the associated results are purged from the BOINC database.

ID: 29061 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Profile David E K
Volunteer moderator
Project administrator
Project developer
Project scientist

Send message
Joined: 1 Jul 05
Posts: 1018
Credit: 4,334,829
RAC: 0
Message 29069 - Posted: 9 Oct 2006, 6:06:22 UTC

The data should exist longer than results in the BOINC database. It's stored in a separate database and will probably get purged a week or so after results are no longer returned.
ID: 29069 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
MattDavis
Avatar

Send message
Joined: 22 Sep 05
Posts: 206
Credit: 1,377,748
RAC: 0
Message 29073 - Posted: 9 Oct 2006, 7:07:41 UTC

This may be a dumb question, but is the top work unit in the RESULTS list the one where we're closest to having the best result? And it's sorted that way down the list?
ID: 29073 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Profile Feet1st
Avatar

Send message
Joined: 30 Dec 05
Posts: 1755
Credit: 4,690,520
RAC: 0
Message 29087 - Posted: 9 Oct 2006, 15:55:41 UTC - in response to Message 29073.  

This may be a dumb question, but is the top work unit in the RESULTS list the one where we're closest to having the best result? And it's sorted that way down the list?


Yes, see David Kim's prior post
Add this signature to your EMail:
Running Microsoft's "System Idle Process" will never help cure cancer, AIDS nor Alzheimer's. But running Rosetta@home just might!
https://boinc.bakerlab.org/rosetta/
ID: 29087 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Profile [B^S] thierry@home
Avatar

Send message
Joined: 17 Sep 05
Posts: 182
Credit: 281,902
RAC: 0
Message 29091 - Posted: 9 Oct 2006, 19:32:10 UTC
Last modified: 9 Oct 2006, 19:32:27 UTC

Very cool feature! I like it :-)
Good job.
ID: 29091 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
AlphaLaser

Send message
Joined: 19 Aug 06
Posts: 52
Credit: 3,327,939
RAC: 0
Message 29094 - Posted: 10 Oct 2006, 0:45:38 UTC - in response to Message 29069.  

The data should exist longer than results in the BOINC database. It's stored in a separate database and will probably get purged a week or so after results are no longer returned.


Thanks for the reply. I've decided to bump up Rosetta share and see how good/useful my predictions can get.

ID: 29094 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
1 · 2 · Next

Message boards : Rosetta@home Science : Energy vs rmsd plots



©2024 University of Washington
https://www.bakerlab.org