Problems and Technical Issues with Rosetta@home
Message boards : Number crunching : Problems and Technical Issues with Rosetta@home
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 karbonade Send message Joined: 22 Mar 20 Posts: 2 Credit: 1,837,700 RAC: 0 |
Hi, My PC crashed and I had to install the OS again (VM Ubuntu) and gave it the same name synstem name as the install before. After that I Insatlled Boinc and set up R@H. But now I don't get any new tasks. I just keep getting the message: "Scheduler request completed: got 0 new tasks. No tasks sent" On my other PC I still get new tasks sent. Is it because the tasks that where there before the crash still are "open" ? Well, they will not be procecced by me.... I also used in Boinc the button " reset project" but that didn't help in any way. Is there something else I have to do? |
yoerik Send message Joined: 24 Mar 20 Posts: 128 Credit: 169,525 RAC: 0 |
Hi, It's not your end. Rosetta is out of WUs. The latest updates from a Project Administrator: https://boinc.bakerlab.org/rosetta/forum_thread.php?id=13533&postid=92681#92681 So don't worry. Most people aren't getting new WUs right now. The WUs you were using, were likely redeployed, or the system will take a few days to realize that you stopped working on those WUs.[/url] |
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MarkJ Send message Joined: 28 Mar 20 Posts: 72 Credit: 25,010,478 RAC: 58 |
There are no silly questions. But HT is enabled. Here are the other BIOS options about performance (last word is the current setting): I would compare these settings with one of your other machines that is working properly. Node Interleaving NUMA group size About the only other thing I can think of would be the windows version. Are you running Home, Pro or Enterprise on it? Is it the same as the other (working) machines? |
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robertmiles Send message Joined: 16 Jun 08 Posts: 1223 Credit: 13,835,555 RAC: 1,242 
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I have 2 tasks with Computation error resolution: It looks likely that you have enough memory, but haven't given BOINC permission to use enough of it. Try this: If you are using the simple view, click on View near the top line, then Advance view.... Click on Projects, then Rosetta@home, then Your account. Under Preferences, click on Computing preferences. For each of the following sections, if they are present: Primary (default) preferences Separate preferences for home Separate preferences for work Separate preferences for school Scroll down to Memory. If the memory percentages are too low to allow 64 GB divided by the number of processors (12 in your case), to be at least 2 GB, then scroll down to Other and click on Edit preferences, then scroll down to Memory and increase the percentages, then scroll down to Other and click on Update preferences. Click on the X at the top right corner of the Computing preferences window to close it. Click on Projects, then Rosetta@home, then Update. If you want to go back to the Simple view, click on View, then Simple view.... |
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Grant (SSSF) Send message Joined: 28 Mar 20 Posts: 1480 Credit: 14,539,845 RAC: 12,741 
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Can't upload anything at present- uploads going in to instant timeout. 31/03/2020 13:56:53 | Rosetta@home | Computation for task rb_03_21_19079_18887_ab_t000__robetta_cstwt_5.0_IGNORE_THE_REST_03_07_902861_8_1 finished 31/03/2020 13:56:54 | Rosetta@home | Starting task 1xl3zs2u_Junior_HalfRoid_design2_COVID-19_SAVE_ALL_OUT_904232_1_0 31/03/2020 13:56:55 | Rosetta@home | Started upload of rb_03_21_19079_18887_ab_t000__robetta_cstwt_5.0_IGNORE_THE_REST_03_07_902861_8_1_r402737099_0 31/03/2020 13:56:57 | Rosetta@home | [error] Error reported by file upload server: can't open log file '../log_bwsrv2/file_upload_handler.log' (errno: 9) 31/03/2020 13:56:57 | Rosetta@home | Temporarily failed upload of rb_03_21_19079_18887_ab_t000__robetta_cstwt_5.0_IGNORE_THE_REST_03_07_902861_8_1_r402737099_0: transient upload error 31/03/2020 13:56:57 | Rosetta@home | Backing off 00:03:13 on upload of rb_03_21_19079_18887_ab_t000__robetta_cstwt_5.0_IGNORE_THE_REST_03_07_902861_8_1_r402737099_0 31/03/2020 13:58:40 | Rosetta@home | Computation for task 0jb7gi3t_jhr_design1_COVID-19_SAVE_ALL_OUT_903456_1_0 finished 31/03/2020 13:58:41 | Rosetta@home | Starting task rb_03_29_19780_19680_ab_t000__robetta_IGNORE_THE_REST_05_08_904234_12_0 31/03/2020 13:58:43 | Rosetta@home | Started upload of 0jb7gi3t_jhr_design1_COVID-19_SAVE_ALL_OUT_903456_1_0_r1714937121_0 31/03/2020 13:58:45 | Rosetta@home | [error] Error reported by file upload server: can't open log file '../log_bwsrv2/file_upload_handler.log' (errno: 9) 31/03/2020 13:58:45 | Rosetta@home | Temporarily failed upload of 0jb7gi3t_jhr_design1_COVID-19_SAVE_ALL_OUT_903456_1_0_r1714937121_0: transient upload error EDIT- finally managed to get them to upload. Grant Darwin NT |
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Grant (SSSF) Send message Joined: 28 Mar 20 Posts: 1480 Credit: 14,539,845 RAC: 12,741
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I really don't know what's wrong. I use the exact same setting on all my servers. As said, Gen8 servers, even with 64 cores are fully loaded. Gen9 servers only take half...Any luck with this problem? Not sure if you answered one of my earlier questions- "Are all of the threads in use on just the one CPU?" If you run another CPU intensive programme, does it use one of the other unused threads, or does it end up on the threads presently in use? Win Sever 2016- could it be a licencing issue? Licence is expired/no longer valid, so only 1 socket usable, even though both CPUs are detected & recognised by the OS? (never had to deal with socket/core/thread licencing myself). Grant Darwin NT |
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yoerik Send message Joined: 24 Mar 20 Posts: 128 Credit: 169,525 RAC: 0 |
Can't upload anything at present- uploads going in to instant timeout. My PC is having trouble transferring files as well. The server on their end is probably overwhelmed by the number of WUs out in the wild, trying to upload. |
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vaughan Send message Joined: 17 Sep 05 Posts: 4 Credit: 21,544,315 RAC: 1,567
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Why don't the Rosetta stats sent to Free-DC update more often? |
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Grant (SSSF) Send message Joined: 28 Mar 20 Posts: 1480 Credit: 14,539,845 RAC: 12,741
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Still unable to report, the Scheduler has been down for a while now (3+hrs). Grant Darwin NT |
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karbonade Send message Joined: 22 Mar 20 Posts: 2 Credit: 1,837,700 RAC: 0 |
Hi, Thanks for your answer yourik. A good thing that there are updates comiming up. |
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ToeBlister Send message Joined: 24 Mar 20 Posts: 3 Credit: 426,122 RAC: 0 |
Rosetta appears to be down for maint? 31-Mar-20 2:12:46 PM | Rosetta@home | Project is temporarily shut down for maintenance |
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HPE Belgium Send message Joined: 27 Mar 20 Posts: 16 Credit: 367,599,142 RAC: 14,964 
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There are no silly questions. But HT is enabled. Here are the other BIOS options about performance (last word is the current setting): I will check the settings... All servers are running windows 2016 Std. 64bit |
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HPE Belgium Send message Joined: 27 Mar 20 Posts: 16 Credit: 367,599,142 RAC: 14,964
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I really don't know what's wrong. I use the exact same setting on all my servers. As said, Gen8 servers, even with 64 cores are fully loaded. Gen9 servers only take half...Any luck with this problem? All servers are fresh install. To be honest, I did not really troubleshoot any further since I was busy setting up all other hosts. This seems to be the only host with the issue. I will dig into it later tomorrow I think. I installed boinctask to get a decent overview and it seems this specific host is not underperforming. But you are right, everything is running on only 1 CPU. I'll come back on that later. First setting up all other hosts. |
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Horny Send message Joined: 5 May 12 Posts: 2 Credit: 1,067,923 RAC: 0 |
Hello, 90% of the wus i uploaded today have only been awarded 8-10 points, is there a reason why these covid wus were distributed to 2 and now hardly give any points? https://boinc.bakerlab.org/rosetta/workunit.php?wuid=1023883360 https://boinc.bakerlab.org/rosetta/workunit.php?wuid=1023826450 lg |
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Jim1348 Send message Joined: 19 Jan 06 Posts: 881 Credit: 52,257,545 RAC: 0 |
90% of the wus i uploaded today have only been awarded 8-10 points I run the 18-hour work units, and see one with 38 points and several more with 64 points. I used to post lengthy analyses trying to understand their scoring, but have given up on it. There are more interesting things to to. |
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Horny Send message Joined: 5 May 12 Posts: 2 Credit: 1,067,923 RAC: 0 |
na what is noticeable is all these 90% were sent 2 times, the other 10% were not and these got normal credits |
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Mod.Sense Volunteer moderator Send message Joined: 22 Aug 06 Posts: 4018 Credit: 0 RAC: 0 |
Some of the WUs are having problems, and without any other work on the server, it gets entirely likely that all you get are ones that others have failed on. WUs are created to only attempt running on two host machines. After that, they die. The Project Team is working on this issue, seems to be primarily with COVID tasks. Rosetta Moderator: Mod.Sense |
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Plomos Send message Joined: 4 Mar 11 Posts: 11 Credit: 439,043 RAC: 0 |
So I'm running on Fedora 31 Boinc 7.16.1 and rosetta tasks do not have the option to view the graphics to be able to see how many decoys a unit is running. I have 12GB of Ram and a core i5 8250U cpu but only use 4 cores because of heating issues, so there should be plenty of RAM to go around for the graphics of the screensaver but it does not show as an option I can click on and is only greyed out. Anyone know why it is not available? |
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Mariusz Borowski Send message Joined: 18 Jul 10 Posts: 1 Credit: 10,383 RAC: 0 |
As 21:20 UTC time I'm not getting any tasks from R@H. My computer was busy with another BOINC project for several days. I've have just logged to my Rosetta account and there is something strange. There is only 8 abandoned tasks listed while, there should be about 50 with various status. Is that normal or there is something wrong with my account? https://boinc.bakerlab.org/rosetta/results.php?userid=386774&offset=0&show_names=0&state=0&appid=0 |
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Mod.Sense Volunteer moderator Send message Joined: 22 Aug 06 Posts: 4018 Credit: 0 RAC: 0 |
Normal that results do not stay on the website forever. Typically removed after a week or two. Rosetta Moderator: Mod.Sense |
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Problems and Technical Issues with Rosetta@home
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