Message boards : Number crunching : Minirosetta 3.62-3.65
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David E K Volunteer moderator Project administrator Project developer Project scientist Send message Joined: 1 Jul 05 Posts: 1480 Credit: 4,334,829 RAC: 0 |
The limit is set based on the BOINC client benchmark results and our server side fpops limit configuration setting (rsc_fpops_bound) and since your new computer is very fast and you have a relatively long run time setting, it was hitting the limit. This is explained well here: http://climateapps2.oerc.ox.ac.uk/cpdnboinc/forum_thread.php?id=5512 which I found googling the topic. This also explains how to fix it on the client side as a temporary fix. Since I've updated our rsc_fpops_bound value on our server, new jobs should have a value that allows your fast computer to run the 2 day run time. |
sinspin Send message Joined: 30 Jan 06 Posts: 29 Credit: 6,574,585 RAC: 0 |
Great news! Thank you very much. Ich will switch back to two days if all my current work is done. |
P . P . L . Send message Joined: 20 Aug 06 Posts: 581 Credit: 4,865,274 RAC: 0 |
Hi. Since there is not a tread for app 3.67 I'll put this here, it erred after 48 min this morning it was one of the last for the old app I had left. P75901_PF03239_1-266_REDO_cst_v02_t000__krypton_SAVE_ALL_OUT_03_09_320949_609_2 https://boinc.bakerlab.org/rosetta/workunit.php?wuid=710119997 Starting work on structure: _00001 # cpu_run_time_pref: 14400 ERROR: unknown atom_name: VRT N ERROR:: Exit from: src/core/chemical/ResidueType.cc line: 3187 [35m[0xd0a3b23] [0xcaa8dc9] [0xa2e271f] [0xa2e49d2] [0xa398686] [0xa2a7765] [0xa2aafdd] [0xabc1534] [0xabb9c72] [0x89dcccf] [0x89e0bfd] [0x89f950a] [0x89a4dbe] [0x89aeab5] [0x8049c59] [0xd27d8f8] [0x8048131] [0m*** glibc detected *** ../../projects/boinc.bakerlab.org_rosetta/minirosetta_3.67_i686-pc-linux-gnu: munmap_chunk(): invalid pointer: 0x12d13f20 *** ======= Backtrace: ========= [0xd2aac45] [0xd26bfe1] [0xc9a1813] [0xc967b46] [0xc036fe7] [0xc037be8] [0x89a7898] [0x89aeab5] [0x8049c59] [0xd27d8f8] [0x8048131] ======= Memory map: ======== 08048000-0dff8000 r-xp 00000000 08:01 133486 /var/lib/boinc-client/projects/boinc.bakerlab.org_rosetta/minirosetta_3.67_i686-pc-linux-gnu 0dff8000-0e001000 rw-p 05faf000 08:01 133486 /var/lib/boinc-client/projects/boinc.bakerlab.org_rosetta/minirosetta_3.67_i686-pc-linux-gnu 0e001000-0e304000 rw-p 00000000 00:00 0 0f98d000-131e1000 rw-p 00000000 00:00 0 [heap] b4500000-b45b5000 rw-p 00000000 00:00 0 b45b5000-b4600000 ---p 00000000 00:00 0 b4600000-b46b6000 rw-p 00000000 00:00 0 b46b6000-b4700000 ---p 00000000 00:00 0 b4700000-b4800000 rw-p 00000000 00:00 0 b4900000-b49d7000 rw-p 00000000 00:00 0 b49d7000-b4a00000 ---p 00000000 00:00 0 b4a00000-b4b00000 rw-p 00000000 00:00 0 b4b00000-b4bfb000 rw-p 00000000 00:00 0 b4bfb000-b4c00000 ---p 00000000 00:00 0 b4c00000-b4d00000 rw-p 00000000 00:00 0 b4d00000-b4e00000 rw-p 00000000 00:00 0 b4f00000-b5000000 rw-p 00000000 00:00 0 b505f000-b5100000 rw-p 00000000 00:00 0 b5100000-b5200000 rw-p 00000000 00:00 0 b5300000-b5400000 rw-p 00000000 00:00 0 b549d000-b5741000 rw-p 00000000 00:00 0 b5741000-b5742000 ---p 00000000 00:00 0 b5742000-b6344000 rw-p 00000000 00:00 0 [stack:15704] b6344000-b7658000 rw-s 00000000 08:01 134834 /var/lib/boinc-client/slots/6/boinc_minirosetta_6 b7658000-b7659000 ---p 00000000 00:00 0 b7659000-b765c000 rw-p 00000000 00:00 0 [stack:15686] b765c000-b765e000 rw-s 00000000 08:01 134716 /var/lib/boinc-client/slots/6/boinc_mmap_file b765e000-b775b000 rw-p 00000000 00:00 0 b775b000-b775c000 r-xp 00000000 00:00 0 [vdso] bfac0000-bfaf1000 rw-p 00000000 00:00 0 [stack] SIGABRT: abort called Stack trace (16 frames): [0xd1d9dff] [0xb775b404] [0xd2c86a0] [0xd285880] [0xd29f2db] [0xd2aac45] [0xd26bfe1] [0xc9a1813] [0xc967b46] [0xc036fe7] [0xc037be8] [0x89a7898] [0x89aeab5] [0x8049c59] [0xd27d8f8] [0x8048131] Exiting... </stderr_txt> ]]> Validate state Invalid Claimed credit 19.6384448376039 Granted credit 0 application version 3.67 |
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Number crunching :
Minirosetta 3.62-3.65
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