problem ^^

https://boinc.bakerlab.org/rosetta/results.php?userid=506&offset=0

Tag::read - parse error, printing backtrace.

Tag::read - parse error - file:istream line:3 column:1 - </TASKOPERATIONS>
Tag::read - parse error - file:istream line:3 column:1 - ^

Tag::read - parse error - file:istream line:7 column:1 - </stage1>
Tag::read - parse error - file:istream line:7 column:1 - ^

Tag::read - parse error - file:istream line:10 column:1 - </stage2>
Tag::read - parse error - file:istream line:10 column:1 - ^

Tag::read - parse error - file:istream line:13 column:1 - </fullatom>
Tag::read - parse error - file:istream line:13 column:1 - ^

Tag::read - parse error - file:istream line:14 column:1 - </SCOREFXNS>
Tag::read - parse error - file:istream line:14 column:1 - ^

Tag::read - parse error - file:istream line:16 column:1 - </FILTERS>
Tag::read - parse error - file:istream line:16 column:1 - ^

Tag::read - parse error - file:istream line:20 column:1 - <Template pdb="input_t000__0_C1/3qupA_303_aln.cl0.pdb" weight=0.215731022402638 /work/robetta/jobs/19939/32293/01_01_cm/t000_/hybrid/cluster0.filt.dist_csts />
Tag::read - parse error - file:istream line:20 column:1 - ^

Tag::read - parse error - file:istream line:18 column:1 - <Hybridize name=hybridize stage1_scorefxn=stage1 stage2_scorefxn=stage2 fa_scorefxn=fullatom  batch=1 stage1_increase_cycles=1.0 stage2_increase_cycles=1.0 linmin_only=0>
Tag::read - parse error - file:istream line:18 column:1 - ^

Tag::read - parse error - file:istream line:17 column:1 - <MOVERS>
Tag::read - parse error - file:istream line:17 column:1 - ^

Tag::read - parse error - file:istream line:1 column:1 - <dock_design>
Tag::read - parse error - file:istream line:1 column:1 - ^


ERROR: false
ERROR:: Exit from: ......srcutilitytagTag.cc line: 387
BOINC:: Error reading and gzipping output datafile: default.out

---

To all of you that are using BOINC 7.0.25 it is know to cause problems on many projects.

Why do you keep using it?

/ end of rant!

---

To all of you that are using BOINC 7.0.25 it is know to cause problems on many projects.

Why do you keep using it?

/ end of rant!

Some of us are also running a very long workunit for another BOINC project - one that does not have checkpoints. I've downloaded 7.0.28 for this computer, but it will be around three weeks before a certain workunits reaches a point that allows me to install much of anything else.

Hi.

Had a four errors lastnight all the same type, on my two rigs after about 4sec running.


https://boinc.bakerlab.org/rosetta/workunit.php?wuid=471483403

rb_07_06_32295_62986__t000__2_D3_SAVE_ALL_OUT_IGNORE_THE_REST_52023_1952_0

Tag::read - parse error - file:istream line:20 column:1 - <Template pdb="input_t000__2_D3/3njkA_301_aln.cl2.pdb" weight=0.325456341525636 /work/robetta/jobs/19939/32295/01_01_cm/t000_/hybrid/cluster2.filt.dist_csts symmdef="input_t000__2_D3/3njkA_301_D3.symm"/>
Tag::read - parse error - file:istream line:20 column:1 - ^

Tag::read - parse error - file:istream line:18 column:1 - <Hybridize name=hybridize stage1_scorefxn=stage1 stage2_scorefxn=stage2 fa_scorefxn=fullatom batch=1 stage1_increase_cycles=1.0 stage2_increase_cycles=1.0 linmin_only=0>
Tag::read - parse error - file:istream line:18 column:1 - ^

Tag::read - parse error - file:istream line:17 column:1 - <MOVERS>
Tag::read - parse error - file:istream line:17 column:1 - ^

Tag::read - parse error - file:istream line:1 column:1 - <dock_design>
Tag::read - parse error - file:istream line:1 column:1 - ^


ERROR: false
ERROR:: Exit from: src/utility/tag/Tag.cc line: 387
BOINC:: Error reading and gzipping output datafile: default.out
called boinc_finish

</stderr_txt>
]]>
====================================================================

https://boinc.bakerlab.org/rosetta/workunit.php?wuid=471471165

rb_07_06_32294_62981__t000__0_C2_SAVE_ALL_OUT_IGNORE_THE_REST_52018_625_1

====================================================================

https://boinc.bakerlab.org/rosetta/workunit.php?wuid=471477518

rb_07_06_32294_62981__t000__0_C1_SAVE_ALL_OUT_IGNORE_THE_REST_52018_1638_0

====================================================================

https://boinc.bakerlab.org/rosetta/workunit.php?wuid=471523340

rb_07_06_32297_62988__t000__0_C2_SAVE_ALL_OUT_IGNORE_THE_REST_52030_2649_0

------------------------------------------------------------------------

---

Another five this morning with the same error as the others, from one of my rigs.


https://boinc.bakerlab.org/rosetta/workunit.php?wuid=471519206

rb_07_06_32297_62988__t000__0_C1_SAVE_ALL_OUT_IGNORE_THE_REST_52030_1311_1

=======================================================

https://boinc.bakerlab.org/rosetta/workunit.php?wuid=471519207

rb_07_06_32297_62988__t000__0_C2_SAVE_ALL_OUT_IGNORE_THE_REST_52030_1570_1

======================================================

https://boinc.bakerlab.org/rosetta/workunit.php?wuid=471516749

rb_07_06_32297_62988__t000__0_C1_SAVE_ALL_OUT_IGNORE_THE_REST_52030_694_1

=====================================================

https://boinc.bakerlab.org/rosetta/workunit.php?wuid=471525586

rb_07_06_32298_62989__t000__3_C1_SAVE_ALL_OUT_IGNORE_THE_REST_52032_2275_1

=====================================================

https://boinc.bakerlab.org/rosetta/workunit.php?wuid=471525107

rb_07_06_32298_62989__t000__1_C1_SAVE_ALL_OUT_IGNORE_THE_REST_52032_682_1

-----------------------------------------------------------

---

There are apparently still some bad workunits in the system. I just ran:

Task ID 517983290
Name rb_07_06_32293_62980__t000__3_C1_SAVE_ALL_OUT_IGNORE_THE_REST_52024_1284_1
Workunit 471496494

which gave up after xml parsing errors:

https://boinc.bakerlab.org/rosetta/result.php?resultid=517983290

BOINC:: Worker startup.
Starting watchdog...
Watchdog active.
Tag::read - parse error, printing backtrace.

Tag::read - parse error - file:istream line:3 column:1 - </TASKOPERATIONS>
Tag::read - parse error - file:istream line:3 column:1 - ^

... etc.


Tag::read - parse error - file:istream line:1 column:1 - <dock_design>
Tag::read - parse error - file:istream line:1 column:1 - ^


ERROR: false
ERROR:: Exit from: src/utility/tag/Tag.cc line: 387
BOINC:: Error reading and gzipping output datafile: default.out

---

I am geting the same errors with - rb_07_06

---

I am geting the same errors with - rb_07_06

The last two of you might want to mention which version of BOINC you saw these errors under, and which operating system, in case that's a factor in the problem.

My team members report many errors(after 5-20 sec from start) on rb_07_06... series too.
(3 different computers + 3 "wingmans" computers from other teams, over 20/40 WUs/tasks)

With these tasks series clearly something is wrong.

And one new(i see such first time) strange glitch on one of comps:
https://boinc.bakerlab.org/rosetta/results.php?hostid=1515881

ALL WUs marked as invalid. Although judging by the logs, most of them have been completed successfully.
In what may be the problem? Errors in work of the validator?
From what we has already tried to do:
- 2 times reinstall BOINC client (version 7.0.25 was initially, then try a version 7.0.28, and at the end version 6.12.34)
- And full reset of the project.
Nothing has changed - same behavior and errors...

https://boinc.bakerlab.org/rosetta/result.php?resultid=521080073

Tc680_fold_and_dock_d2_frank_intra_inter_cst_wt_4.0_52292_394_0

# cpu_run_time_pref: 86400
======================================================
DONE ::     1 starting structures  55103.1 cpu seconds
This process generated      1 decoys from       1 attempts
======================================================
BOINC :: WS_max 0

hier, je regarde image :) => ne pas 2 de plus (starting structures)

erreur :)

---

523135364
523135354

ERROR: ERROR: FragmentIO: could not open file aa0000109_05.200_v1_3
ERROR:: Exit from: ......srccorefragmentFragmentIO.cc line: 233
BOINC:: Error reading and gzipping output datafile: default.out
called boinc_finish

---