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Message 67518 - Posted: 1 Sep 2010, 14:52:22 UTC - in response to Message 67502.  

What is a credit unit based on?
I have around 527. Thanks,


What is Credit
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Message 67560 - Posted: 3 Sep 2010, 3:44:09 UTC

This failed after 12 sec.

lrm_jorj_combined_torsion_it06_run01_A_rlbd_2hl7__SAVE_ALL_OUT_IGNORE_THE_RESTlr10_DECOY_21224_318

http://boinc.bakerlab.org/rosetta/workunit.php?wuid=331004480

<core_client_version>6.10.17</core_client_version>
<![CDATA[
<message>
process exited with code 1 (0x1, -255)
</message>
<stderr_txt>

( left out bits in middle )

Setting WU description ...
Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip
Unpacking WU data ...
Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/yfsong_lrm_jorj_combined_torsion_it06_run01_A.zip
Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/lr10_2hl7.fix.out.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...

ERROR: Unable to open weights. Neither ./dslf_weights.wts nor dslf_weights.wts nor minirosetta_database/scoring/weights/dslf_weights.wts exist
ERROR:: Exit from: src/core/scoring/ScoreFunctionFactory.cc line: 178
BOINC:: Error reading and gzipping output datafile: default.out
called boinc_finish

</stderr_txt>

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Message 67575 - Posted: 3 Sep 2010, 21:50:43 UTC

This failed after 14 sec.

lrm_jorj_combined_torsion_it06_run01_A_rlbd_1r26__SAVE_ALL_OUT_IGNORE_THE_RESTlr8_DECOY_21224_522


http://boinc.bakerlab.org/rosetta/workunit.php?wuid=331161671

<core_client_version>6.2.14</core_client_version>
<![CDATA[
<message>
process exited with code 1 (0x1, -255)
</message>
<stderr_txt>

( left out bits in middle )

Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip
Unpacking WU data ...
Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/yfsong_lrm_jorj_combined_torsion_it06_run01_A.zip
Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/lr8_1r26.fix.out.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...

ERROR: Unable to open weights. Neither ./dslf_weights.wts nor dslf_weights.wts nor minirosetta_database/scoring/weights/dslf_weights.wts exist
ERROR:: Exit from: src/core/scoring/ScoreFunctionFactory.cc line: 178
BOINC:: Error reading and gzipping output datafile: default.out
called boinc_finish

</stderr_txt>


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Message 67581 - Posted: 4 Sep 2010, 2:45:26 UTC - in response to Message 67575.  


lrm_jorj_combined_torsion_it06_run01_A_rlbd_2hl7__SAVE_ALL_OUT_IGNORE_THE_RESTlr10_DECOY_21224_318

lrm_jorj_combined_torsion_it06_run01_A_rlbd_1r26__SAVE_ALL_OUT_IGNORE_THE_RESTlr8_DECOY_21224_522

ERROR: Unable to open weights. Neither ./dslf_weights.wts nor dslf_weights.wts nor minirosetta_database/scoring/weights/dslf_weights.wts exist
ERROR:: Exit from: src/core/scoring/ScoreFunctionFactory.cc line: 178
BOINC:: Error reading and gzipping output datafile: default.out
called boinc_finish

Exact same error for me in the following tasks:

lrm_jorj_combined_torsion_it06_run01_A_rlbd_1h75__SAVE_ALL_OUT_IGNORE_THE_RESTlr13_DECOY_21224_147_1
lrm_jorj_combined_torsion_it06_run01_A_rlbd_1o73__SAVE_ALL_OUT_IGNORE_THE_RESTlr8_DECOY_21224_118_0
lrm_jorj_combined_torsion_it06_run01_A_rlbd_2uzr__SAVE_ALL_OUT_IGNORE_THE_RESTlr10_DECOY_21224_120_0
lrm_jorj_combined_torsion_it06_run01_A_rlbd_1s12__SAVE_ALL_OUT_IGNORE_THE_RESTlr8_DECOY_21224_213_0
lrm_jorj_combined_torsion_it06_run01_A_rlbd_2i1u__SAVE_ALL_OUT_IGNORE_THE_RESTlr10_DECOY_21224_169_1

Also, the following error in the following tasks:
ERROR: rsd_type_list.size()
ERROR:: Exit from: ..\\..\\src\\core\\fragment\\Frame.cc line: 62
BOINC:: Error reading and gzipping output datafile: default.out

td-only-2-Alg13_8-10_21413_155_1
td-only-2-RrR43_7-10_21413_131_1
td-only-2-DsbA_10-12_21413_137_1
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Message 67583 - Posted: 4 Sep 2010, 8:09:15 UTC

Another failed after 2sec, same problem as others.


lrm_jorj_combined_torsion_it06_run01_A_rlbd_1xd6__SAVE_ALL_OUT_IGNORE_THE_RESTlr5_DECOY_21224_606

http://boinc.bakerlab.org/rosetta/workunit.php?wuid=331225615

<core_client_version>6.2.14</core_client_version>
<![CDATA[
<message>
process exited with code 1 (0x1, -255)
</message>
<stderr_txt>

Setting WU description ...
Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip
Unpacking WU data ...
Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/yfsong_lrm_jorj_combined_torsion_it06_run01_A.zip
Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/lr5_1xd6.fix.out.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...

ERROR: Unable to open weights. Neither ./dslf_weights.wts nor dslf_weights.wts nor minirosetta_database/scoring/weights/dslf_weights.wts exist
ERROR:: Exit from: src/core/scoring/ScoreFunctionFactory.cc line: 178
BOINC:: Error reading and gzipping output datafile: default.out
called boinc_finish

</stderr_txt>

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Message 67601 - Posted: 6 Sep 2010, 1:59:12 UTC

This one failed after 4sec, same as others.


lrm_jorj_combined_torsion_it06_run01_A_rlbd_2iiy__SAVE_ALL_OUT_IGNORE_THE_RESTlr10_DECOY_21224_814_0

http://boinc.bakerlab.org/rosetta/workunit.php?wuid=331916208

<core_client_version>6.10.17</core_client_version>
<![CDATA[
<message>
process exited with code 1 (0x1, -255)
</message>
<stderr_txt>

( left out bits in middle )

Initializing random generators... ok
Initialization complete.
Setting WU description ...
Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip
Unpacking WU data ...
Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/yfsong_lrm_jorj_combined_torsion_it06_run01_A.zip
Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/lr10_2iiy.fix.out.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...

ERROR: Unable to open weights. Neither ./dslf_weights.wts nor dslf_weights.wts nor minirosetta_database/scoring/weights/dslf_weights.wts exist
ERROR:: Exit from: src/core/scoring/ScoreFunctionFactory.cc line: 178
BOINC:: Error reading and gzipping output datafile: default.out
called boinc_finish

</stderr_txt>



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Message 67602 - Posted: 6 Sep 2010, 5:31:34 UTC

And another one, took 12sec to die.

lrm_jorj_combined_torsion_it06_run01_A_rlbd_1l6p__SAVE_ALL_OUT_IGNORE_THE_RESTlr13_DECOY_21224_797

http://boinc.bakerlab.org/rosetta/workunit.php?wuid=331893230


<core_client_version>6.10.17</core_client_version>
<![CDATA[
<message>
process exited with code 1 (0x1, -255)
</message>
<stderr_txt>


Setting WU description ...
Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip
Unpacking WU data ...
Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/yfsong_lrm_jorj_combined_torsion_it06_run01_A.zip
Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/lr13_1l6p.fix.out.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...

ERROR: Unable to open weights. Neither ./dslf_weights.wts nor dslf_weights.wts nor minirosetta_database/scoring/weights/dslf_weights.wts exist
ERROR:: Exit from: src/core/scoring/ScoreFunctionFactory.cc line: 178
BOINC:: Error reading and gzipping output datafile: default.out
called boinc_finish

</stderr_txt>

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Message 67629 - Posted: 7 Sep 2010, 17:58:29 UTC

thought you guys fixed the weights problem???

lrm_jorj_combined_torsion_it06_run01_A_rlbd_2i1u__SAVE_ALL_OUT_IGNORE_THE_RESTlr10_DECOY_21224_584_0

ERROR: Unable to open weights. Neither ./dslf_weights.wts nor dslf_weights.wts nor minirosetta_database\\scoring/weights/dslf_weights.wts exist
ERROR:: Exit from: ..\\..\\src\\core\\scoring\\ScoreFunctionFactory.cc line: 178
BOINC:: Error reading and gzipping output datafile: default.out
called boinc_finish
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Message 67634 - Posted: 7 Sep 2010, 22:04:42 UTC

Hi.

The first copy of this task errored, i can\'t see a problem with mine

don\'t know why it got a validate error.

cs-td-2-LkR15_5-5_20162_213_1

http://boinc.bakerlab.org/rosetta/workunit.php?wuid=331107668

Server state__Over
Outcome__Validate error
Client state__Done
Exit status__0 (0x0)

<core_client_version>6.2.14</core_client_version>
<![CDATA[
<stderr_txt>

Starting work on structure: _00023
======================================================
DONE :: 1 starting structures 14182.3 cpu seconds
This process generated 23 decoys from 23 attempts
======================================================

BOINC :: Watchdog shutting down...
BOINC :: BOINC support services shutting down cleanly ...
called boinc_finish

</stderr_txt>

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Message 67694 - Posted: 10 Sep 2010, 21:52:08 UTC

This one has failed twice, mine after 14sec.

SAXS-score-1egaB_SAVE_ALL_OUT_21827_871_1

http://boinc.bakerlab.org/rosetta/workunit.php?wuid=332831626


<core_client_version>6.10.17</core_client_version>
<![CDATA[
<message>
process exited with code 1 (0x1, -255)
</message>


Starting work on structure: _00001

ERROR: Assertion failure: runtime_assert( ( begin + size - 1 ) <= pose.total_residue() );
ERROR:: Exit from: src/protocols/abinitio/FragmentMover.cc line: 250
BOINC:: Error reading and gzipping output datafile: default.out
called boinc_finish

</stderr_txt>

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Message 67702 - Posted: 11 Sep 2010, 2:40:02 UTC

A strange one:

T0605_tjrs_stg0_lrlxjcst_t000__casp9_SAVE_ALL_OUT_21824_1219_1
ERROR: Error in traceback: pointer doesn\'t go anywhere!

ERROR:: Exit from: ..\\..\\src\\core\\sequence\\Aligner.cc line: 79
BOINC:: Error reading and gzipping output datafile: default.out

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Message 67706 - Posted: 11 Sep 2010, 7:50:11 UTC

This ran for 3min.

fix_disulf_v4_NMR_1j0t_DISULF__BOINC_abrelax.v1_SAVE_ALL_OUT_21861_87_0

http://boinc.bakerlab.org/rosetta/workunit.php?wuid=333047271

<core_client_version>6.2.14</core_client_version>
<![CDATA[
<message>
process exited with code 1 (0x1, -255)
</message>

Starting work on structure: _00001
# cpu_run_time_pref: 14400

ERROR: rsd_type_list.size()
ERROR:: Exit from: src/core/fragment/Frame.cc line: 62
BOINC:: Error reading and gzipping output datafile: default.out
called boinc_finish

</stderr_txt>

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Message 67711 - Posted: 11 Sep 2010, 9:32:38 UTC

P.P.L Your core client (Boinc Manager) is a little out dated, try updating your core client to the recommended version This may help
Have a crunching good day!!
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Message 67712 - Posted: 11 Sep 2010, 10:53:54 UTC

That BOINC error above is because of an error during processing that task. I\'m not convinced updating BOINC will help prevent that error.
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Message 67717 - Posted: 11 Sep 2010, 23:00:05 UTC

Hi.

As transient says, i think that (process exited with code 1 (0x1, -255) is

a generic error code they/boinc use.

I\'ll stop posting that bit in future.

As for boinc versions goes as they say, if it ain\'t broke don\'t fix it!

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Message 67726 - Posted: 13 Sep 2010, 7:56:31 UTC

I bought a brand new AMD Phenom(tm) II X4 925 Processor and return to BOINC my projects. But some interesting things began. What ever project working seti, einstein, rosetta or what ever it is, what wu number it is in that session (in a number downloaded WUs for that day), anyhow there was A (one) calculation error. What may it be?
Machine Specs:
XP Pro SP3
AMD Phenom(tm) II X4 925 Processor
2 GB DDR3 Ram
BOINC Ver. 6.10.58
THANKS for any answers or tips about after any observed the same or like this error before.
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Message 67728 - Posted: 13 Sep 2010, 17:45:22 UTC

Levent TERLEMEZ
Looks like their task reported back with this:
ERROR: rsd_type_list.size()
ERROR:: Exit from: ..\\..\\src\\core\\fragment\\Frame.cc line: 62
BOINC:: Error reading and gzipping output datafile: default.out
called boinc_finish


The task was restarted five times. If the task was unable to reach a checkpoint in that time, then the task is aborted for you. But I would expect a message about too many restarts with no progress rather then the one you got.
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Message 67729 - Posted: 13 Sep 2010, 20:49:26 UTC - in response to Message 67728.  

Levent TERLEMEZ
Looks like their task reported back with this:
ERROR: rsd_type_list.size()
ERROR:: Exit from: ..\\..\\src\\core\\fragment\\Frame.cc line: 62
BOINC:: Error reading and gzipping output datafile: default.out
called boinc_finish


The task was restarted five times. If the task was unable to reach a checkpoint in that time, then the task is aborted for you. But I would expect a message about too many restarts with no progress rather then the one you got.


Thanks for the reply, well sorry for the easy way I selected-asking more, is it possible to be corrupted while downloading. Thanks again.


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Message 67732 - Posted: 14 Sep 2010, 14:42:50 UTC

...is it possible to be corrupted while downloading.


It is possible for corruption to occur to any data that passes over a network. However, BOINC has signatures that double check the integrity of the files you receive. When a signature mismatch is found, the error is reported differently and the task is not run.

Generally the error about gzipping is due to the output file not being produced. So it isn\'t there to zip. And this is because the error occurred before any output was produced.
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Message 67737 - Posted: 15 Sep 2010, 1:48:49 UTC

I\'ve ran a few of these already no problem, this is a different error.

Ran for 17sec.

T0585_tj_rs_stg0_lrlxjcst_t000__casp9_SAVE_ALL_OUT_21908_3066_0

http://boinc.bakerlab.org/rosetta/workunit.php?wuid=333706692

<core_client_version>6.2.14</core_client_version>
<![CDATA[
<message>
process got signal 11
</message>


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