Minirosetta v1.45 bug thread

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A Few Good Men

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Message 57878 - Posted: 15 Dec 2008, 0:00:49 UTC

Greg be

I have uninstalled and reinstalled XP, reinstalled boinc, added the save in memory clause, standard clocks on computer, memtest on ram, burning for whole machine and im still getting these errors about comp error and locked files. At the same time SETI has no problems at all with the machine, its speed or its ram or anything.

"A good program doesnt need 54 hoops to jump through before it works"
After a clean install and full format , i have to lean towards the rosetta coding as the cause.

Problems with this code are:

Doesnt release all or just some of the processes when asked to snooze, lockfile is always present, says too many restarts.
Other machines here are running fine but this one seems to have problems with only Rosetta at home. After a clean install and full format , i have to lean towards the rosetta coding as the cause.
Does Not follow fair sharing of resources, Boinc manager at 50:50 and Rosetta has basically locked out all other projects.
How about a nice little msi file to patch up the damage and lets get folding.
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Profile [AF>Slappyto] popolito

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Message 57883 - Posted: 15 Dec 2008, 6:13:53 UTC

https://boinc.bakerlab.org/rosetta/result.php?resultid=213877775
Exit status -1073741819 (0xc0000005)
Reason: Access Violation (0xc0000005) at address 0x007FA877 read attempt to address 0xF87CC8B3
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Profile Greg_BE
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Message 57886 - Posted: 15 Dec 2008, 9:41:25 UTC - in response to Message 57878.  

very strange...but i think that installing boinc again just reinstalls the base program and does nothing to the project files. did you go into your slots folder and erase the slots? that is where the lockfiles are located. be sure to complete all your current running tasks first before deleting. I run boinc off of a different partition than C, perhaps you can complete your current work and then install on a different partition and see if that takes care of the problem. after I did the slot clean up on my system everything worked ok.


Greg be

I have uninstalled and reinstalled XP, reinstalled boinc, added the save in memory clause, standard clocks on computer, memtest on ram, burning for whole machine and im still getting these errors about comp error and locked files. At the same time SETI has no problems at all with the machine, its speed or its ram or anything.

"A good program doesnt need 54 hoops to jump through before it works"
After a clean install and full format , i have to lean towards the rosetta coding as the cause.

Problems with this code are:

Doesnt release all or just some of the processes when asked to snooze, lockfile is always present, says too many restarts.
Other machines here are running fine but this one seems to have problems with only Rosetta at home. After a clean install and full format , i have to lean towards the rosetta coding as the cause.
Does Not follow fair sharing of resources, Boinc manager at 50:50 and Rosetta has basically locked out all other projects.
How about a nice little msi file to patch up the damage and lets get folding.

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A Few Good Men

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Message 57889 - Posted: 15 Dec 2008, 14:54:55 UTC

Greg,
I did a full Hard Drive format, there are no files project or otherwise then reinstalled XP. The slots are cleaned up.
After reinstalling Boinc and Rosetta as a project letting it manage itself for 24hours I had all the same errors as before, lockfile, not releasing and as always no credit. I have been running the services from a nonSystem disk, I will reinstall on the system disk and see how that works.
Thanks for taking time to help out.
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Sid Celery

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Message 57890 - Posted: 15 Dec 2008, 14:57:57 UTC - in response to Message 57703.  

And now 16 more successes out of 18 making 40 out of 50. Most errors came early, so I'm now confident enough to up my run-time from 2 to 3 hours again.

Update on this. In the last week, 116 MiniRosetta 1.45 tasks, 3hr runtime:
64 Success (55%)
52 Failure (45%)

Of failures:
19 manually aborted
28 "Can't acquire lockfile" errors
5 Exit code -1073741819 (0cx0000005)

26 Rosetta Beta 5.98 tasks, 3hr runtime - 100% success.

So, better than last time I ran with 3hr runtimes (was 43%) but still some way to go. I think the figure for 2hr run times was 73% (up to 80% with v1.45 on above figures).
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Message 57891 - Posted: 15 Dec 2008, 15:09:48 UTC

A number of failed 1.45 abinitio-tasks in the last 24 hours:

These two I had to abort, they had run more than 20 hours on 4 hours default, refused to display graphics:

abinitio_abrelax_nohomfrag_129_B_2ccvA_5483_3423_088

abinitio_abrelax_nohomfrag_129_B_1ctf__5483_3423_0

These collapsed quickly:

abinitio_abrelax_nohomfrag_129_B_1dzoA_5483_1560_1

<message>
process exited with code 193 (0xc1, -63)
</message>
<stderr_txt>
minirosetta_1.45_i686-apple-darwin(47077,0xa0538fa0) malloc: *** error for object 0x17478c0: Non-aligned pointer being freed (2)
*** set a breakpoint in malloc_error_break to debug
# cpu_run_time_pref: 14400
minirosetta_1.45_i686-apple-darwin(47077,0xa0538fa0) malloc: *** error for object 0x17478c0: Non-aligned pointer being freed (2)
*** set a breakpoint in malloc_error_break to debug
SIGBUS: bus error

abinitio_abrelax_nohomfrag_129_B_1npsA_5483_3423_0

<message>
process exited with code 193 (0xc1, -63)
</message>
<stderr_txt>
minirosetta_1.45_i686-apple-darwin(48148,0xa0538fa0) malloc: *** error for object 0x17478c0: Non-aligned pointer being freed (2)
*** set a breakpoint in malloc_error_break to debug
# cpu_run_time_pref: 14400
SIGBUS: bus error

abinitio_abrelax_nohomfrag_129_B_2chf__5483_3423_0

<message>
process exited with code 193 (0xc1, -63)
</message>
<stderr_txt>
minirosetta_1.45_i686-apple-darwin(48486,0xa0538fa0) malloc: *** error for object 0x17478c0: Non-aligned pointer being freed (2)
*** set a breakpoint in malloc_error_break to debug
# cpu_run_time_pref: 14400
minirosetta_1.45_i686-apple-darwin(48486,0xa0538fa0) malloc: *** error for object 0x17478c0: Non-aligned pointer being freed (2)
*** set a breakpoint in malloc_error_break to debug
minirosetta_1.45_i686-apple-darwin(48486,0xa0538fa0) malloc: *** error for object 0x17478c0: Non-aligned pointer being freed (2)
*** set a breakpoint in malloc_error_break to debug
SIGBUS: bus error

abinitio_abrelax_nohomfrag_129_B_1o4wA_5483_3423_0

<message>
process exited with code 193 (0xc1, -63)
</message>
<stderr_txt>
minirosetta_1.45_i686-apple-darwin(58522,0xa0538fa0) malloc: *** error for object 0x17478c0: Non-aligned pointer being freed (2)
*** set a breakpoint in malloc_error_break to debug
# cpu_run_time_pref: 14400
minirosetta_1.45_i686-apple-darwin(58522,0xb0087000) malloc: *** error for object 0x17478c0: Non-aligned pointer being freed (2)
*** set a breakpoint in malloc_error_break to debug
terminate called after throwing an instance of 'std::length_error'
what(): basic_string::_S_create
SIGABRT: abort called

abinitio_abrelax_nohomfrag_129_B_1elwA_5483_3423_0

<message>
process exited with code 193 (0xc1, -63)
</message>
<stderr_txt>
minirosetta_1.45_i686-apple-darwin(47419,0xa0538fa0) malloc: *** error for object 0x17478c0: Non-aligned pointer being freed (2)
*** set a breakpoint in malloc_error_break to debug
# cpu_run_time_pref: 14400
SIGSEGV: segmentation violation
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ramostol

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Message 57892 - Posted: 15 Dec 2008, 15:12:53 UTC
Last modified: 15 Dec 2008, 15:13:57 UTC

Deleted as duplicate - unstable internet connection...
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Profile Greg_BE
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Message 57897 - Posted: 15 Dec 2008, 18:50:28 UTC
Last modified: 15 Dec 2008, 19:15:38 UTC

come on guys..your killing me.
2 compute errors in 8 hours today and then 4 out of 6 compute errors on the 11th that can be placed on bad tasks. What is with tasks getting half way and then crashing with no credit? You should make rosie grant the claimed credit on these errors since it is computing the credit. then we are not wasting our cpu time and electricity on 0 points. I could have got 101 points for the second crash. this month i have lost 18.5 hrs in bad tasks that died halfway and I could have got 508.4 credits if there was granted credit for crashing. The crash rate this month so far has been 6% on my system.

Here are the latest tasks that died.

1ef4A_ZNMP_ABRELAX_tetraL_IGNORE_THE_REST_ZINC_METALLOPROTEIN-1ef4A-_5478_9411_0 Exit status -1073741819 (0xc0000005), CPU time 12223.05
stderr out

<core_client_version>6.2.19</core_client_version>
<![CDATA[
<message>
- exit code -1073741819 (0xc0000005)
</message>
<stderr_txt>
# cpu_run_time_pref: 21600

</stderr_txt>
]]>
-----------

abinitio_abrelax_nohomfrag_129_B_1vie__5483_167_0
CPU time 14489.83
Exit status -1073741819 (0xc0000005)
Unhandled Exception Detected...

- Unhandled Exception Record -
Reason: Access Violation (0xc0000005) at address 0x0046D054 write attempt to address 0x085A5FFC

Engaging BOINC Windows Runtime Debugger...
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ramostol

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Message 57924 - Posted: 16 Dec 2008, 10:17:21 UTC

With 1.47 launched these results are perhaps not too interesting, but to be on the safe side:

This has indeed been a Black Monday, with all 1.45 tasks reserved for the coming week already crashed.

Early crashes with no result file:
8 tasks lr5_score13
2 tasks lr5_score12
1 task cc_3_5_nocst4
1 task 1_irna
1 task cs_vanilla
26 tasks abinitio...

In addition 2 tasks had to be manually aborted showing the signs of being non-terminators:
abinitio_abrelax_nohomfrag_129_B_2acy__5483_2781_0

abinitio_abrelax_nohomfrag_129_B_1r26A_5483_2512_0

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Profile robertmiles

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Message 57931 - Posted: 16 Dec 2008, 12:51:58 UTC - in response to Message 57924.  

With 1.47 launched these results are perhaps not too interesting, but to be on the safe side:

This has indeed been a Black Monday, with all 1.45 tasks reserved for the coming week already crashed.

Early crashes with no result file:
8 tasks lr5_score13
2 tasks lr5_score12
1 task cc_3_5_nocst4
1 task 1_irna
1 task cs_vanilla
26 tasks abinitio...

In addition 2 tasks had to be manually aborted showing the signs of being non-terminators:
abinitio_abrelax_nohomfrag_129_B_2acy__5483_2781_0

abinitio_abrelax_nohomfrag_129_B_1r26A_5483_2512_0



You seem to be inserting a few extra characters when you create links, probably quote marks, which prevents me from following the links.
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Profile Greg_BE
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Message 57933 - Posted: 16 Dec 2008, 13:08:41 UTC - in response to Message 57931.  
Last modified: 16 Dec 2008, 13:10:53 UTC

With 1.47 launched these results are perhaps not too interesting, but to be on the safe side:

This has indeed been a Black Monday, with all 1.45 tasks reserved for the coming week already crashed.

Early crashes with no result file:
8 tasks lr5_score13
2 tasks lr5_score12
1 task cc_3_5_nocst4
1 task 1_irna
1 task cs_vanilla
26 tasks abinitio...

In addition 2 tasks had to be manually aborted showing the signs of being non-terminators:
abinitio_abrelax_nohomfrag_129_B_2acy__5483_2781_0

abinitio_abrelax_nohomfrag_129_B_1r26A_5483_2512_0



You seem to be inserting a few extra characters when you create links, probably quote marks, which prevents me from following the links.




**note** i edited his url lines to get rid of the " ". thing should be ok now.
there is nothing to see there as it was a user abort and that cancels run time information. this is for both links.
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Profile Greg_BE
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Message 57940 - Posted: 16 Dec 2008, 19:25:13 UTC
Last modified: 16 Dec 2008, 19:31:44 UTC

abinitio_abrelax_nohomfrag_129_B_1opd__5483_1764_0

now you guys are starting to irritate me badly!!!!!!!!!
CPU time 21344.08 vs 21600run time.
stderr out

<core_client_version>6.2.19</core_client_version>
<![CDATA[
<message>
- exit code -1073741819 (0xc0000005)
</message>
<stderr_txt>
# cpu_run_time_pref: 21600


Unhandled Exception Detected...

- Unhandled Exception Record -
Reason: Access Violation (0xc0000005) at address 0x00427BEA write attempt to address 0x08787FFC


What the heck is this error now? did your task go bad at the last minute?
can someone from the team explain what the heck 0xc blah blah error means?

I was giving you 6hr run times but now i have dropped to 4. to many credit losses lately. If the 1.47's crash I will be reducing my resource share as well, until you guys figure out what the heck is going on.
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Profile Greg_BE
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Message 57959 - Posted: 17 Dec 2008, 8:59:12 UTC
Last modified: 17 Dec 2008, 9:00:52 UTC

duplicate
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Profile rochester new york
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Message 58441 - Posted: 4 Jan 2009, 1:00:08 UTC

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Message 58526 - Posted: 5 Jan 2009, 16:49:48 UTC

I'm new here so i don't know much about this program. But for a couple of days i don't get new task(s) this is what i see at messages window:

5-1-2009 17:28:28|rosetta@home|Sending scheduler request: To fetch work. Requesting 21601 seconds of work, reporting 0 completed tasks
5-1-2009 17:28:33|rosetta@home|Scheduler request completed: got 0 new tasks

Can i do something about this or are their just not any new tasks at the moment?
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Evan

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Message 58527 - Posted: 5 Jan 2009, 17:13:23 UTC

It would appear that there are no new tasks at the moment. Be patient and all will be revealed. There haven't been any announcement from the team so either there is a problem their end or they are getting some new work units ready.
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Message boards : Number crunching : Minirosetta v1.45 bug thread



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