Report long-running models here

Author	Message
Mod.Sense Volunteer moderator Send message Joined: 22 Aug 06 Posts: 4018 Credit: 0 RAC: 0	Message 59204 - Posted: 31 Jan 2009, 16:09:13 UTC Last modified: 31 Jan 2009, 16:10:14 UTC karlandellie please abort that one. The newer version of Rosetta should resolve such problems in the future. [edit] looks like the watchdog already did that for you. The task has reported back. Rosetta Moderator: Mod.Sense ID: 59204 · Rating: 0 · rate: / Reply Quote

lusvladimir Send message Joined: 18 Oct 05 Posts: 12 Credit: 1,784,854 RAC: 0	Message 59206 - Posted: 31 Jan 2009, 18:35:57 UTC This WU stopped after preferred runtime (1hrs) + 4hrs Debian Linux Boinc 6.2.14 Rosetta Mini 1.54 1nkuA_BOINC_MPZN_with_zinc_abrelax_cs_frags_6231_156556_0 https://boinc.bakerlab.org/result.php?resultid=224365694 CPU Time: 18255.47 1nkuA_BOINC_MPZN_with_zinc_abrelax_cs_frags_6231_113531_0 https://boinc.bakerlab.org/result.php?resultid=224061637 CPU Time: 18444.31 1nkuA_BOINC_MPZN_with_zinc_abrelax_cs_frags_6231_113176_0 https://boinc.bakerlab.org/result.php?resultid=224058752 CPU Time: 18159.49 stderr out: ... End of unzipping. Setting database description ... Setting up checkpointing ... Setting up folding (abrelax) ... Beginning folding (abrelax) ... BOINC:: Worker startup. Starting watchdog... Watchdog active. Starting work on structure: _00001 # cpu_run_time_pref: 3600 ====> called boinc_finish </stderr_txt> ]]> Validate state Invalid ID: 59206 · Rating: 0 · rate: / Reply Quote

Fishead Send message Joined: 3 Sep 08 Posts: 7 Credit: 89,566 RAC: 0	Message 59215 - Posted: 1 Feb 2009, 9:50:25 UTC Looks like I've got a similar problem like Aegis, with minirosetta version 1.47. https://boinc.bakerlab.org/rosetta/workunit.php?wuid=204036661 Preferences are 6 hours as well, it's been running for about 6 hours 45 min now. Like Aegis' WU, it is still at model 1 and the Accepted window has been showing the same folding for some time. However, the Searching window displays a constantly changing, high detail folding. Again, these changes doesn't seem to count as a full steps. Low energy is at -2.92..., Accepted engery is 17.71... I can't tell you anything about the memory it uses, though. ID: 59215 · Rating: 0 · rate: / Reply Quote

model500 Send message Joined: 29 Oct 08 Posts: 12 Credit: 1,254,422 RAC: 0	Message 59481 - Posted: 9 Feb 2009, 15:11:25 UTC One of my systems is saying a run time of 56-72 hours for current and new work units when it usually take 3ish hours per WU. Should I await the results before posting here? ID: 59481 · Rating: 0 · rate: / Reply Quote

Mod.Sense Volunteer moderator Send message Joined: 22 Aug 06 Posts: 4018 Credit: 0 RAC: 0	Message 59484 - Posted: 9 Feb 2009, 16:43:27 UTC RichT, the newest BOINC clients are having some serious problems calculating their duration correction factors. Don't worry. They won't take any longer then they used to to actually complete. Rosetta Moderator: Mod.Sense ID: 59484 · Rating: 0 · rate: / Reply Quote

Paul D. Buck Send message Joined: 17 Sep 05 Posts: 815 Credit: 1,812,737 RAC: 0	Message 59488 - Posted: 9 Feb 2009, 18:44:02 UTC - in response to Message 59484. RichT, the newest BOINC clients are having some serious problems calculating their duration correction factors. Don't worry. They won't take any longer then they used to to actually complete. The problem is with skewed DCF you can eventually lose the ability to get work or maintain a queue of an appropriate size. ID: 59488 · Rating: 0 · rate: / Reply Quote

robertmiles Send message Joined: 16 Jun 08 Posts: 1234 Credit: 14,338,560 RAC: 1,227	Message 59685 - Posted: 20 Feb 2009, 16:17:15 UTC A 14 hour workunit gave only 3 decoys: https://boinc.bakerlab.org/rosetta/workunit.php?wuid=209407884 ID: 59685 · Rating: 0 · rate: / Reply Quote

AdeB Send message Joined: 12 Dec 06 Posts: 45 Credit: 4,428,086 RAC: 0	Message 59760 - Posted: 23 Feb 2009, 17:18:44 UTC Preferred runtime + 4 hrs for workunit loopbuild_mamaln_ideal_hb_t312__IGNORE_THE_REST_1zjc_1_7634_42_0. stderr out: ... BOINC:: Worker startup. Starting watchdog... Watchdog active. # cpu_run_time_pref: 43200 Hbond tripped. ====> called boinc_finish ... AdeB ID: 59760 · Rating: 0 · rate: / Reply Quote

AdeB Send message Joined: 12 Dec 06 Posts: 45 Credit: 4,428,086 RAC: 0	Message 59804 - Posted: 25 Feb 2009, 20:13:36 UTC And another one: loopbuild_reference_allmodels_hb_t328__IGNORE_THE_REST_1NRIA_8_7691_12_0 ID: 59804 · Rating: 0 · rate: / Reply Quote

robertmiles Send message Joined: 16 Jun 08 Posts: 1234 Credit: 14,338,560 RAC: 1,227	Message 59849 - Posted: 27 Feb 2009, 13:38:29 UTC I'm currently requesting 12-hour workunits, and got one that decided this was only enough time to complete 2 decoys: https://boinc.bakerlab.org/rosetta/workunit.php?wuid=211096685 I'm running BOINC 6.2.28 under Vista SP1 with an AMD dual-core CPU. ID: 59849 · Rating: 0 · rate: / Reply Quote

robertmiles Send message Joined: 16 Jun 08 Posts: 1234 Credit: 14,338,560 RAC: 1,227	Message 59871 - Posted: 28 Feb 2009, 13:37:26 UTC - in response to Message 59685. A 14 hour workunit gave only 3 decoys: https://boinc.bakerlab.org/rosetta/workunit.php?wuid=209407884 A 12 hour workunit giving only 2 decoys: https://boinc.bakerlab.org/rosetta/result.php?resultid=231599135 ID: 59871 · Rating: 0 · rate: / Reply Quote

robertmiles Send message Joined: 16 Jun 08 Posts: 1234 Credit: 14,338,560 RAC: 1,227	Message 59966 - Posted: 4 Mar 2009, 14:38:02 UTC Only 4 decoys in a 12-hour workunit: https://boinc.bakerlab.org/rosetta/result.php?resultid=232744981 ID: 59966 · Rating: 0 · rate: / Reply Quote

robertmiles Send message Joined: 16 Jun 08 Posts: 1234 Credit: 14,338,560 RAC: 1,227	Message 60170 - Posted: 16 Mar 2009, 14:23:14 UTC A workunit with at least one slow model: https://boinc.bakerlab.org/rosetta/result.php?resultid=235592155 I request 12-hour workunits; this one completed only 4 decoys. ID: 60170 · Rating: 0 · rate: / Reply Quote

robertmiles Send message Joined: 16 Jun 08 Posts: 1234 Credit: 14,338,560 RAC: 1,227	Message 60253 - Posted: 21 Mar 2009, 13:35:15 UTC Only one decoy, even for a 12-hour workunit: https://boinc.bakerlab.org/rosetta/result.php?resultid=236831326 ID: 60253 · Rating: 0 · rate: / Reply Quote

robertmiles Send message Joined: 16 Jun 08 Posts: 1234 Credit: 14,338,560 RAC: 1,227	Message 60317 - Posted: 25 Mar 2009, 14:01:50 UTC Only 3 decoys in a 12-hour workunit: https://boinc.bakerlab.org/rosetta/result.php?resultid=237823194 ID: 60317 · Rating: 0 · rate: / Reply Quote

robertmiles Send message Joined: 16 Jun 08 Posts: 1234 Credit: 14,338,560 RAC: 1,227	Message 60370 - Posted: 29 Mar 2009, 13:36:31 UTC Only 3 decoys from a 12-hour workunit: https://boinc.bakerlab.org/rosetta/result.php?resultid=239036538 ID: 60370 · Rating: 0 · rate: / Reply Quote

Rifleman Send message Joined: 19 Nov 08 Posts: 17 Credit: 139,408 RAC: 0	Message 60428 - Posted: 1 Apr 2009, 5:52:15 UTC https://boinc.bakerlab.org/rosetta/result.php?resultid=239774765 19 credits? Just because this unit was more difficult to generate a decoy? Pretty rough for 12 hours work. ID: 60428 · Rating: 0 · rate: / Reply Quote

tralala Send message Joined: 8 Apr 06 Posts: 376 Credit: 581,806 RAC: 0	Message 60433 - Posted: 1 Apr 2009, 18:18:54 UTC - in response to Message 60428. https://boinc.bakerlab.org/rosetta/result.php?resultid=239774765 19 credits? Just because this unit was more difficult to generate a decoy? Pretty rough for 12 hours work. This is one WU for this thread ID: 60433 · Rating: 0 · rate: / Reply Quote

Hammeh Send message Joined: 11 Nov 08 Posts: 63 Credit: 211,283 RAC: 0	Message 60610 - Posted: 12 Apr 2009, 8:19:00 UTC ccf_cheat_allmulti_1.0_chunk_1_8_hb_t326__IGNORE_THE_REST_2GHRA_8_9981_104_0 using minirosetta version 154 Windows Vista Home Premium 32-bit 3GB RAM Running for over 7 hours, scan runtime set to 3 hours. No link to WU as yet, it is still running. ID: 60610 · Rating: 0 · rate: / Reply Quote

Feet1st Send message Joined: 30 Dec 05 Posts: 1755 Credit: 4,690,520 RAC: 0	Message 60809 - Posted: 24 Apr 2009, 14:06:23 UTC I was only able to complete 4 models on this guy with a 24hr runtime preference. It ran for 20.5hrs and then must have seen that one more model would take it over the 24hr target. Task name is lb_mtyka_picked_csts_hb_t370__IGNORE_THE_REST_2ARZA_6_11182_9_0 Add this signature to your EMail: Running Microsoft's "System Idle Process" will never help cure cancer, AIDS nor Alzheimer's. But running Rosetta@home just might! https://boinc.bakerlab.org/rosetta/ ID: 60809 · Rating: 0 · rate: / Reply Quote