Can I predict the 3D structure of my own protein sequence

Message boards : Rosetta@home Science : Can I predict the 3D structure of my own protein sequence

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pcadmin

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Message 40156 - Posted: 1 May 2007, 16:30:51 UTC

I

I'm a new Rosetta@home subscriber, and I'm wondering about how this work.

I understand the way the CPU's change datas, but I do not understand if it is possible to predict the 3D structure of my own protein sequence.

And If it is possible How can I do that?


Thank you for your attention
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Mod.Sense
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Message 40160 - Posted: 1 May 2007, 16:45:11 UTC

No, the protein sequences are a part of the work units assigned by the server. If you are a scientist, you may want to collaborate with Bakerlab. If you are just a very interested science buff, they are working towards an interactive game-like program that will let you control some of the folds performed and try different conformations. But I don't know if they plan to allow you to enter your own amino acid sequence.
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costas

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Message 40162 - Posted: 1 May 2007, 18:14:25 UTC

When will we get this program?
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Ethan
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Message 40166 - Posted: 1 May 2007, 19:46:54 UTC

Certian types of folks can get a copy of Rosetta. Here's a link to more information:

http://depts.washington.edu/ventures/UW_Technology/Express_Licenses/Rosetta/
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Message 40168 - Posted: 1 May 2007, 20:19:46 UTC - in response to Message 40162.  

When will we get this program?


I haven't heard any dates thrown out yet. But it is something to look forward to.
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Message 40199 - Posted: 2 May 2007, 9:13:25 UTC

Certian types of folks can get a copy of Rosetta.

Unfortunately, when I looked into it, it excluded...
very interested science buff

... types.

I wanted to look at the technique from a non-biologists view. I believed then, and still believe now, that people with a different academic background may view the whole problem in a different way and see possibilities that biologists, with their biological "baggage" might never have thought of.
Wave upon wave of demented avengers march cheerfully out of obscurity into the dream.
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James Thompson

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Message 40219 - Posted: 2 May 2007, 15:28:08 UTC - in response to Message 40156.  

I

I'm a new Rosetta@home subscriber, and I'm wondering about how this work.

I understand the way the CPU's change datas, but I do not understand if it is possible to predict the 3D structure of my own protein sequence.

And If it is possible How can I do that?


Thank you for your attention



Predicting protein structure is a very computationally intensive process, so it could be difficult on your own. Check out our web service for structure prediction here if you're interested:

http://www.robetta.org/
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Message boards : Rosetta@home Science : Can I predict the 3D structure of my own protein sequence



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