Message boards : Rosetta@home Science : A quantum Rosetta Client? D-Wave offering free use of their Quantum Computer for anyone working on Covid19
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djshoxxx Send message Joined: 15 Mar 20 Posts: 1 Credit: 159,567 RAC: 144 |
The title pretty much says what I am wondering. Today I read this: https://techcrunch.com/2020/03/31/d-wave-gives-anyone-working-on-responses-to-the-covid-19-free-access-to-its-quantum-computer/ and https://www.dwavesys.com/press-releases/d-wave-provides-free-quantum-cloud-access-global-response-covid-19 for those who dont want to follow the link, here is what d-wave said in their release: BURNABY, BC – (March 31, 2020) — D-Wave Systems Inc., the leader in quantum computing systems, software, and services, today announced the immediate availability of free access to its quantum systems via the Leap quantum cloud service for anyone working on responses to the COVID-19 crisis. Joining the effort are partners and customers including CINECA, DENSO, Forschungszentrum Jülich, Kyocera Corporation, KYOCERA Communication Systems, MDR/Cliffhanger, Menten AI, NEC Solution Innovators Ltd., OTI Lumionics, QAR Lab at LMU Munich, Sigma-i, Tohoku University, and Volkswagen, who will provide access to engineering teams with expertise on how to use the quantum computer and formulate problems, as well as help in developing solutions. I am absolutely not a biologist nor do I understand anything about biology more than knowing that "the mitochondria is the powerhouse of the cell" from high school, but I do know a bit about computers. I did a google search to see if anyone has ever done any protein folding with quantum computers and I found this: https://arxiv.org/pdf/1908.02163.pdf , titled: Resource-Efficient Quantum Algorithm for Protein Folding and authored by: Anton Robert,1, 2 Panagiotis Kl. Barkoutsos,1 Stefan Woerner,1 and Ivano Tavernelli1, ∗ 1 IBM Research GmbH, Zurich Research Laboratory, Säumerstrasse 4, 8803 Rüschlikon, Switzerland 2PASTEUR, Département de chimie, École Normale Supérieure, PSL University, Sorbonne Université, CNRS, 75005 Paris, France (Dated: August 7, 2019) For those who want the cliffs notes on the paper Here is the first paragraph of the paper: Predicting the three-dimensional (3D) structure and here is the last paragraph of the paper: Discussion and conclusions. In this work, we introduced a quantum algorithm for the solution of the PF The paper finishes off with a few more pages of "ACKNOWLEDGEMENTS and MATERIALS AND METHODS" and then finally several more pages of "SUPPORTING INFORMATION FOR “RESOURCE-EFFICIENT QUANTUM ALGORITHM FOR PROTEIN FOLDING” Trying to follow the paper made me dizzy, but from reading the parts that I understand (please correct me if I am wrong) they are saying that there is potential in folding proteins as they had success with their work when using IBMs 20 qubit computer. Would it be possible to create a client that would work on D-Waves Quantum Hybrid computer system? As I understand it, their latest generation system is a 5000 qubit true quantum computer thats also backed by classical HPC servers to create a hybrid 'cloud' system that anyone can try out for free for small amounts of time on the cloud. You can gain more free time by doing various things like making your project open source on github and other similar things. They are currently opening up their system to anyone who is working on the covid19 virus as the articles above show. Some of the companies that are already customers of d-wave are using their computing time to research covid19 in their own ways. None of those companies have biological backgrounds as far as I understand - they are running problems like how to run a hospital more efficiently with covid19 as a variable, and how to keep infrastructure, government and supply chains running smoothly while keeping infections minimal. I dont think any of them are looking directly at the virus itself with their computing time. I am a big fan of boinc/F@H/decentralized computing etc and I have visited d-waves headquarters in Burnaby (I live in East Van) and they are quite serious about what they do, but they are still a very young company and yet they are very well funded and have created quite a buzz around the world with their accomplishments. Folding@home Projects are known world wide for their development and popularization of distributed computing and also for their contribution to various scientific fields. When I found out that there was a distributed computing project that helped research COVID19 I looked into it as soon as I heard about it and I was donating my CPU and GPU within hours of landing on Rosettas website. I am not a healthcare worker nor a scientist so other than staying educated on COVID19, being a responsible citizen by isolating to keep myself healthy and just as importantly, to not unknowingly or not spread it to anyone else - the only other major contribution I can think of doing is contributing to distributed computing that helps researchers understand this virus. If Rosetta@home created a client that would work on d-wave systems Leap hybrid system, not only would Rosetta get free time on one of the only true quantum computers on the planet - but it would also create a lot of chatter. People would be talking about it. It would be good for d-wave, more people will hear about their small Canadian company with a unique service. Them working with a distributed folding at home project, ROSETTA, that is one of SETIs sister projects (not sure if thats exactly how you would say SETI and rosetta are related), would make them look very legitimate. They would get a lot of respect from many who previously were skeptical about their far-fetched sounding system if they were to run any well established distributed computing problem to help find solutions, especially rosetta, especially with covid19 influencing the whole planet right now. Whats even more important tho, I think, is that even if their cloud system doesnt help rosetta very much, I think that it would give a lot of press for both d-wave company, and rosetta folding at home, and I dont exactly know what discovery we will make about covid19 if the processing power keeps increasing due to more and more people joining the project, but I bet only good can come of it. Can someone explain to me what the best case scenario would be if a very well written quantum Rosetta client was written for d-waves leap cloud system and d-wave continued to run it for free as it was showing it was working very efficiently and possibly even factor in more classical folding at home rosetta clients due to the positive publicity of the two working together? These were just some ideas i was thinking about. Whatever happens I hope we find something that helps, and soon! Being isolated I decided to finally get a computer up and running that I was previously going to use for mining or a node of some sort, but ill likely donate its power to rosetta. Not going to lie - im in my 30s, am healthy, dont smoke but I am still scared to catch covid19, but I am more worried about my loved ones whom are thousands of miles away. I just want to not have to worry about them or getting sick myself, or even worse, making others sick. I really just want to go back to work. Take care everyone! |
robertmiles Send message Joined: 16 Jun 08 Posts: 1232 Credit: 14,269,631 RAC: 1,429 |
The quantum computer specifications I have seen so far include far less memory than the Rosetta client requires. Therefore, any application for quantum computers would have to very different from the current Rosetta client. |
Kennywor Send message Joined: 14 Oct 08 Posts: 8 Credit: 241 RAC: 0 |
Sounds like a PhD for someone. |
UniKnight Send message Joined: 28 Oct 20 Posts: 1 Credit: 8,401 RAC: 0 |
Greetings fellow humanoid, Looks like it's already in development: A Peptide Designed using the Rosetta Software Suite and the D-Wave 2000Q https://www.dwavesys.com/sites/default/files/Dwave_Menten%20AI_Case_Study_V7_1_0.pdf https://www.dwavesys.com/sites/default/files/8_new_Menten.pdf https://support.dwavesys.com/hc/en-us/community/posts/360042701053-Covid-19-genome Looks like they're a couple of resources available. Quantum Programming 101: Solving a Problem From End to End | D-Wave Webinar https://www.youtube.com/watch?v=Q4FE4jou5CA Free Quantum Cloud Access for Global Response to COVID-19 https://support.dwavesys.com/hc/en-us/articles/360045177574 Connect on COVID-19 Development https://support.dwavesys.com/hc/en-us/community/topics/360001751313-Connect-on-COVID-19-Development My Personal favorite's: Quantum Computing Onboarding https://support.dwavesys.com/hc/en-us/community/posts/360044286753-Quantum-Computing-Onboarding The Leap IDE | D-Wave Leap https://www.youtube.com/watch?v=62gDQ14pjwM GitHub https://github.com/dwave-examples Best wishes! |
[VENETO] boboviz Send message Joined: 1 Dec 05 Posts: 1994 Credit: 9,543,381 RAC: 5,926 |
Looks like it's already in development: VERY interesting!!! |
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Rosetta@home Science :
A quantum Rosetta Client? D-Wave offering free use of their Quantum Computer for anyone working on Covid19
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