Rosetta 4.03

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Profile [VENETO] boboviz

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Message 87267 - Posted: 12 Sep 2017, 8:26:44 UTC

New rosetta app has arrived silently.... :-P
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Profile David E K
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Message 87270 - Posted: 12 Sep 2017, 18:17:17 UTC - in response to Message 87267.  

Yes, I'm running some tests before an official release.
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Profile [B@P] Daniel

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Message 87276 - Posted: 12 Sep 2017, 22:20:17 UTC

Please also update the Rosetta@home preferences page, now it does not allow to select apps to crunch.
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Profile David E K
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Message 87278 - Posted: 13 Sep 2017, 0:40:41 UTC - in response to Message 87276.  

I'll have to look into the possible consequences/negative impacts of enabling this feature. We'd prefer not to enable any bias though.
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Profile [VENETO] boboviz

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Message 87307 - Posted: 16 Sep 2017, 9:40:00 UTC - in response to Message 87270.  

Yes, I'm running some tests before an official release.


It seems a very little test.
No work here and no work on Ralph.
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Profile David E K
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Message 87330 - Posted: 20 Sep 2017, 18:44:27 UTC - in response to Message 87307.  

I just announced it to the lab so I'd expect some production jobs soon.
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Message 87335 - Posted: 21 Sep 2017, 13:53:11 UTC

What's new in this version?
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Profile [VENETO] boboviz

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Message 87337 - Posted: 21 Sep 2017, 18:18:01 UTC - in response to Message 87335.  
Last modified: 21 Sep 2017, 18:18:24 UTC

What's new in this version?


From Ralph:
A new rosetta_beta app has been added as version 4.00 for testing. This version represents a recent version of the Rosetta source distribution

And from RosettaCommons
https://www.rosettacommons.org/docs/latest/release-notes
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Message 87383 - Posted: 26 Sep 2017, 9:06:26 UTC

My firsts 4.03 wus are gone without problems.
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Message 87393 - Posted: 27 Sep 2017, 16:16:15 UTC

Will 4.03 replace 3.73 or will they coexist?
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Profile David E K
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Message 87395 - Posted: 27 Sep 2017, 18:35:38 UTC - in response to Message 87393.  

Eventually it will replace minirosetta. Our public structure prediction server, Robetta, and in house pipelines are not yet compatible with the new version.
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Message 87396 - Posted: 27 Sep 2017, 18:50:11 UTC

Why is the minirosetta app "mini"? And why is the 4.03 version not "mini"?
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Message 87398 - Posted: 27 Sep 2017, 22:32:31 UTC - in response to Message 87396.  

It's historical.

R@h first started with a "rosetta" app which was the early fortran to C++ port of the Rosetta software package.

The fortran like C++ code base was then ported to a better organized, multi-library, object oriented C++ software package which current Rosetta is still based on. This package was called "minirosetta" to distinguish it from the old fortran like Rosetta package.

The 4.03 version has a different name mainly because "rosetta_scripts" xml based protocols are not backwards compatible with minirosetta jobs, giving us a reason to go back to the actual "rosetta" name.

So the naming went from rosetta to minirosetta and back to rosetta.
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Message 87401 - Posted: 28 Sep 2017, 8:34:04 UTC - in response to Message 87395.  

Eventually it will replace minirosetta. Our public structure prediction server, Robetta, and in house pipelines are not yet compatible with the new version.


Seems a lot of work to do.
(always hoping for optimizations)
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Message boards : Number crunching : Rosetta 4.03



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