Task 837744924

Name TL00000015_fold_SAVE_ALL_OUT_377867_5643_0
Workunit 757949584
Created 18 Jun 2016, 11:50:42 UTC
Sent 18 Jun 2016, 11:59:44 UTC
Report deadline 2 Jul 2016, 11:59:44 UTC
Received 2 Jul 2016, 19:51:54 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 2603738
Run time
CPU time 7 hours 56 min 55 sec
Validate state Valid
Credit 250.88
Device peak FLOPS 0.00 GFLOPS
Application version ---

Stderr output

<core_client_version>7.0.80</core_client_version>
<![CDATA[
<stderr_txt>
[2016- 6-18 15: 0: 8:] :: BOINC:: Initializing ... ok.
[2016- 6-18 15: 0: 8:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
command: projects/boinc.bakerlab.org_rosetta/minirosetta_3.73_windows_x86_64.exe -abinitio::fastrelax 1 -ex2aro 1 -frag3 00001.200.3mers -in:file:native 00001.pdb -silent_gz 1 -frag9 00001.200.9mers -out:file:silent default.out -ex1 1 -abinitio::rsd_wt_loop 0.5 -relax::default_repeats 15 -abinitio::use_filters false -abinitio::increase_cycles 10 -abinitio::rsd_wt_helix 0.5 -abinitio::rg_reweight 0.5 -in:file:boinc_wu_zip TL00000015_data.zip -out:file:silent default.out -silent_gz -mute all -nstruct 10000 -cpu_run_time 28800 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 1379345
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_d0bf94b.zip
Unpacking WU data ...
Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/TL00000015_data.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00001
[2016- 6-18 15:10: 9:] :: BOINC:: Initializing ... ok.
[2016- 6-18 15:10: 9:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
command: projects/boinc.bakerlab.org_rosetta/minirosetta_3.73_windows_x86_64.exe -abinitio::fastrelax 1 -ex2aro 1 -frag3 00001.200.3mers -in:file:native 00001.pdb -silent_gz 1 -frag9 00001.200.9mers -out:file:silent default.out -ex1 1 -abinitio::rsd_wt_loop 0.5 -relax::default_repeats 15 -abinitio::use_filters false -abinitio::increase_cycles 10 -abinitio::rsd_wt_helix 0.5 -abinitio::rg_reweight 0.5 -in:file:boinc_wu_zip TL00000015_data.zip -out:file:silent default.out -silent_gz -mute all -nstruct 10000 -cpu_run_time 28800 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 1379345
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Using previously extracted minirosetta_database.
Unpacking WU data ...
Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/TL00000015_data.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00001
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_1 ... success! 
Starting work on structure: _00002
Starting work on structure: _00003
Starting work on structure: _00004
[2016- 6-18 17:31:15:] :: BOINC:: Initializing ... ok.
[2016- 6-18 17:31:15:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
command: projects/boinc.bakerlab.org_rosetta/minirosetta_3.73_windows_x86_64.exe -abinitio::fastrelax 1 -ex2aro 1 -frag3 00001.200.3mers -in:file:native 00001.pdb -silent_gz 1 -frag9 00001.200.9mers -out:file:silent default.out -ex1 1 -abinitio::rsd_wt_loop 0.5 -relax::default_repeats 15 -abinitio::use_filters false -abinitio::increase_cycles 10 -abinitio::rsd_wt_helix 0.5 -abinitio::rg_reweight 0.5 -in:file:boinc_wu_zip TL00000015_data.zip -out:file:silent default.out -silent_gz -mute all -nstruct 10000 -cpu_run_time 28800 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 1379345
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Using previously extracted minirosetta_database.
Unpacking WU data ...
Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/TL00000015_data.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00004
Continuing computation from checkpoint: chk_S_00000004_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000004_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000004_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000004_ClassicAbinitio__stage_3_iter1_2 ... success! 
[2016- 6-18 17:47:14:] :: BOINC:: Initializing ... ok.
[2016- 6-18 17:47:14:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
command: projects/boinc.bakerlab.org_rosetta/minirosetta_3.73_windows_x86_64.exe -abinitio::fastrelax 1 -ex2aro 1 -frag3 00001.200.3mers -in:file:native 00001.pdb -silent_gz 1 -frag9 00001.200.9mers -out:file:silent default.out -ex1 1 -abinitio::rsd_wt_loop 0.5 -relax::default_repeats 15 -abinitio::use_filters false -abinitio::increase_cycles 10 -abinitio::rsd_wt_helix 0.5 -abinitio::rg_reweight 0.5 -in:file:boinc_wu_zip TL00000015_data.zip -out:file:silent default.out -silent_gz -mute all -nstruct 10000 -cpu_run_time 28800 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 1379345
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Using previously extracted minirosetta_database.
Unpacking WU data ...
Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/TL00000015_data.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00004
Continuing computation from checkpoint: chk_S_00000004_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000004_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000004_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000004_ClassicAbinitio__stage_3_iter1_2 ... success! 
Continuing computation from checkpoint: chk_S_00000004_ClassicAbinitio__stage_3_iter1_3 ... success! 
Continuing computation from checkpoint: chk_S_00000004_ClassicAbinitio__stage_3_iter1_4 ... success! 
Continuing computation from checkpoint: chk_S_00000004_ClassicAbinitio__stage_3_iter1_5 ... success! 
Continuing computation from checkpoint: chk_S_00000004_ClassicAbinitio__stage_3_iter1_6 ... success! 
[2016- 6-18 18: 1:43:] :: BOINC:: Initializing ... ok.
[2016- 6-18 18: 1:43:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
command: projects/boinc.bakerlab.org_rosetta/minirosetta_3.73_windows_x86_64.exe -abinitio::fastrelax 1 -ex2aro 1 -frag3 00001.200.3mers -in:file:native 00001.pdb -silent_gz 1 -frag9 00001.200.9mers -out:file:silent default.out -ex1 1 -abinitio::rsd_wt_loop 0.5 -relax::default_repeats 15 -abinitio::use_filters false -abinitio::increase_cycles 10 -abinitio::rsd_wt_helix 0.5 -abinitio::rg_reweight 0.5 -in:file:boinc_wu_zip TL00000015_data.zip -out:file:silent default.out -silent_gz -mute all -nstruct 10000 -cpu_run_time 28800 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 1379345
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Using previously extracted minirosetta_database.
Unpacking WU data ...
Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/TL00000015_data.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00004
Continuing computation from checkpoint: chk_S_00000004_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000004_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000004_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000004_ClassicAbinitio__stage_3_iter1_2 ... success! 
Continuing computation from checkpoint: chk_S_00000004_ClassicAbinitio__stage_3_iter1_3 ... success! 
Continuing computation from checkpoint: chk_S_00000004_ClassicAbinitio__stage_3_iter1_4 ... success! 
Continuing computation from checkpoint: chk_S_00000004_ClassicAbinitio__stage_3_iter1_5 ... success! 
Continuing computation from checkpoint: chk_S_00000004_ClassicAbinitio__stage_3_iter1_6 ... success! 
Continuing computation from checkpoint: chk_S_00000004_ClassicAbinitio__stage_3_iter1_7 ... success! 
Continuing computation from checkpoint: chk_S_00000004_ClassicAbinitio__stage_3_iter1_8 ... success! 
Continuing computation from checkpoint: chk_S_00000004_ClassicAbinitio__stage_3_iter1_9 ... success! 
Continuing computation from checkpoint: chk_S_00000004_ClassicAbinitio__stage_3_iter1_10 ... success! 
Continuing computation from checkpoint: chk_S_00000004_ClassicAbinitio__stage4_kk_1 ... success! 
Starting work on structure: _00005
Starting work on structure: _00006
Starting work on structure: _00007
Starting work on structure: _00008
Starting work on structure: _00009
[2016- 6-18 20:10:33:] :: BOINC:: Initializing ... ok.
[2016- 6-18 20:10:33:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
command: projects/boinc.bakerlab.org_rosetta/minirosetta_3.73_windows_x86_64.exe -abinitio::fastrelax 1 -ex2aro 1 -frag3 00001.200.3mers -in:file:native 00001.pdb -silent_gz 1 -frag9 00001.200.9mers -out:file:silent default.out -ex1 1 -abinitio::rsd_wt_loop 0.5 -relax::default_repeats 15 -abinitio::use_filters false -abinitio::increase_cycles 10 -abinitio::rsd_wt_helix 0.5 -abinitio::rg_reweight 0.5 -in:file:boinc_wu_zip TL00000015_data.zip -out:file:silent default.out -silent_gz -mute all -nstruct 10000 -cpu_run_time 28800 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 1379345
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Using previously extracted minirosetta_database.
Unpacking WU data ...
Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/TL00000015_data.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00009
Continuing computation from checkpoint: chk_S_00000009_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000009_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000009_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000009_ClassicAbinitio__stage_3_iter1_2 ... success! 
Continuing computation from checkpoint: chk_S_00000009_ClassicAbinitio__stage_3_iter1_3 ... success! 
[2016- 6-18 20:27:55:] :: BOINC:: Initializing ... ok.
[2016- 6-18 20:27:55:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
command: projects/boinc.bakerlab.org_rosetta/minirosetta_3.73_windows_x86_64.exe -abinitio::fastrelax 1 -ex2aro 1 -frag3 00001.200.3mers -in:file:native 00001.pdb -silent_gz 1 -frag9 00001.200.9mers -out:file:silent default.out -ex1 1 -abinitio::rsd_wt_loop 0.5 -relax::default_repeats 15 -abinitio::use_filters false -abinitio::increase_cycles 10 -abinitio::rsd_wt_helix 0.5 -abinitio::rg_reweight 0.5 -in:file:boinc_wu_zip TL00000015_data.zip -out:file:silent default.out -silent_gz -mute all -nstruct 10000 -cpu_run_time 28800 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 1379345
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Using previously extracted minirosetta_database.
Unpacking WU data ...
Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/TL00000015_data.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00009
Continuing computation from checkpoint: chk_S_00000009_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000009_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000009_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000009_ClassicAbinitio__stage_3_iter1_2 ... success! 
Continuing computation from checkpoint: chk_S_00000009_ClassicAbinitio__stage_3_iter1_3 ... success! 
Continuing computation from checkpoint: chk_S_00000009_ClassicAbinitio__stage_3_iter1_4 ... success! 
Continuing computation from checkpoint: chk_S_00000009_ClassicAbinitio__stage_3_iter1_5 ... success! 
Continuing computation from checkpoint: chk_S_00000009_ClassicAbinitio__stage_3_iter1_6 ... success! 
Continuing computation from checkpoint: chk_S_00000009_ClassicAbinitio__stage_3_iter1_7 ... success! 
Continuing computation from checkpoint: chk_S_00000009_ClassicAbinitio__stage_3_iter1_8 ... success! 
Continuing computation from checkpoint: chk_S_00000009_ClassicAbinitio__stage_3_iter1_9 ... success! 
Continuing computation from checkpoint: chk_S_00000009_ClassicAbinitio__stage_3_iter1_10 ... success! 
Continuing computation from checkpoint: chk_S_00000009_ClassicAbinitio__stage4_kk_1 ... success! 
Continuing computation from checkpoint: chk_S_00000009_ClassicAbinitio__stage4_kk_2 ... success! 
Starting work on structure: _00010
Starting work on structure: _00011
Starting work on structure: _00012
[2016- 6-18 21:20: 8:] :: BOINC:: Initializing ... ok.
[2016- 6-18 21:20: 8:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
command: projects/boinc.bakerlab.org_rosetta/minirosetta_3.73_windows_x86_64.exe -abinitio::fastrelax 1 -ex2aro 1 -frag3 00001.200.3mers -in:file:native 00001.pdb -silent_gz 1 -frag9 00001.200.9mers -out:file:silent default.out -ex1 1 -abinitio::rsd_wt_loop 0.5 -relax::default_repeats 15 -abinitio::use_filters false -abinitio::increase_cycles 10 -abinitio::rsd_wt_helix 0.5 -abinitio::rg_reweight 0.5 -in:file:boinc_wu_zip TL00000015_data.zip -out:file:silent default.out -silent_gz -mute all -nstruct 10000 -cpu_run_time 28800 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 1379345
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Using previously extracted minirosetta_database.
Unpacking WU data ...
Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/TL00000015_data.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00012
Starting work on structure: _00013
[2016- 6-18 21:53:50:] :: BOINC:: Initializing ... ok.
[2016- 6-18 21:53:50:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
command: projects/boinc.bakerlab.org_rosetta/minirosetta_3.73_windows_x86_64.exe -abinitio::fastrelax 1 -ex2aro 1 -frag3 00001.200.3mers -in:file:native 00001.pdb -silent_gz 1 -frag9 00001.200.9mers -out:file:silent default.out -ex1 1 -abinitio::rsd_wt_loop 0.5 -relax::default_repeats 15 -abinitio::use_filters false -abinitio::increase_cycles 10 -abinitio::rsd_wt_helix 0.5 -abinitio::rg_reweight 0.5 -in:file:boinc_wu_zip TL00000015_data.zip -out:file:silent default.out -silent_gz -mute all -nstruct 10000 -cpu_run_time 28800 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 1379345
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Using previously extracted minirosetta_database.
Unpacking WU data ...
Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/TL00000015_data.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00013
Continuing computation from checkpoint: chk_S_00000013_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000013_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000013_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000013_ClassicAbinitio__stage_3_iter1_2 ... success! 
Continuing computation from checkpoint: chk_S_00000013_ClassicAbinitio__stage_3_iter1_3 ... success! 
Starting work on structure: _00014
[2016- 6-23 18:17:43:] :: BOINC:: Initializing ... ok.
[2016- 6-23 18:17:43:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
command: projects/boinc.bakerlab.org_rosetta/minirosetta_3.73_windows_x86_64.exe -abinitio::fastrelax 1 -ex2aro 1 -frag3 00001.200.3mers -in:file:native 00001.pdb -silent_gz 1 -frag9 00001.200.9mers -out:file:silent default.out -ex1 1 -abinitio::rsd_wt_loop 0.5 -relax::default_repeats 15 -abinitio::use_filters false -abinitio::increase_cycles 10 -abinitio::rsd_wt_helix 0.5 -abinitio::rg_reweight 0.5 -in:file:boinc_wu_zip TL00000015_data.zip -out:file:silent default.out -silent_gz -mute all -nstruct 10000 -cpu_run_time 28800 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 1379345
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Using previously extracted minirosetta_database.
Unpacking WU data ...
Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/TL00000015_data.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00014
Starting work on structure: _00015
Starting work on structure: _00016
Starting work on structure: _00017
Starting work on structure: _00018
Starting work on structure: _00019
Starting work on structure: _00020
Starting work on structure: _00021
Starting work on structure: _00022
Starting work on structure: _00023
Starting work on structure: _00024
Starting work on structure: _00025
[2016- 6-23 21:56:57:] :: BOINC:: Initializing ... ok.
[2016- 6-23 21:56:57:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
command: projects/boinc.bakerlab.org_rosetta/minirosetta_3.73_windows_x86_64.exe -abinitio::fastrelax 1 -ex2aro 1 -frag3 00001.200.3mers -in:file:native 00001.pdb -silent_gz 1 -frag9 00001.200.9mers -out:file:silent default.out -ex1 1 -abinitio::rsd_wt_loop 0.5 -relax::default_repeats 15 -abinitio::use_filters false -abinitio::increase_cycles 10 -abinitio::rsd_wt_helix 0.5 -abinitio::rg_reweight 0.5 -in:file:boinc_wu_zip TL00000015_data.zip -out:file:silent default.out -silent_gz -mute all -nstruct 10000 -cpu_run_time 28800 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 1379345
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Using previously extracted minirosetta_database.
Unpacking WU data ...
Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/TL00000015_data.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00025
Continuing computation from checkpoint: chk_S_00000025_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000025_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000025_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000025_ClassicAbinitio__stage_3_iter1_2 ... success! 
[2016- 6-23 22: 4:48:] :: BOINC:: Initializing ... ok.
[2016- 6-23 22: 4:48:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
command: projects/boinc.bakerlab.org_rosetta/minirosetta_3.73_windows_x86_64.exe -abinitio::fastrelax 1 -ex2aro 1 -frag3 00001.200.3mers -in:file:native 00001.pdb -silent_gz 1 -frag9 00001.200.9mers -out:file:silent default.out -ex1 1 -abinitio::rsd_wt_loop 0.5 -relax::default_repeats 15 -abinitio::use_filters false -abinitio::increase_cycles 10 -abinitio::rsd_wt_helix 0.5 -abinitio::rg_reweight 0.5 -in:file:boinc_wu_zip TL00000015_data.zip -out:file:silent default.out -silent_gz -mute all -nstruct 10000 -cpu_run_time 28800 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 1379345
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Using previously extracted minirosetta_database.
Unpacking WU data ...
Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/TL00000015_data.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00025
Continuing computation from checkpoint: chk_S_00000025_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000025_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000025_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000025_ClassicAbinitio__stage_3_iter1_2 ... success! 
Continuing computation from checkpoint: chk_S_00000025_ClassicAbinitio__stage_3_iter1_3 ... success! 
Continuing computation from checkpoint: chk_S_00000025_ClassicAbinitio__stage_3_iter1_4 ... success! 
Continuing computation from checkpoint: chk_S_00000025_ClassicAbinitio__stage_3_iter1_5 ... success! 
[2016- 6-23 22:16:26:] :: BOINC:: Initializing ... ok.
[2016- 6-23 22:16:26:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
command: projects/boinc.bakerlab.org_rosetta/minirosetta_3.73_windows_x86_64.exe -abinitio::fastrelax 1 -ex2aro 1 -frag3 00001.200.3mers -in:file:native 00001.pdb -silent_gz 1 -frag9 00001.200.9mers -out:file:silent default.out -ex1 1 -abinitio::rsd_wt_loop 0.5 -relax::default_repeats 15 -abinitio::use_filters false -abinitio::increase_cycles 10 -abinitio::rsd_wt_helix 0.5 -abinitio::rg_reweight 0.5 -in:file:boinc_wu_zip TL00000015_data.zip -out:file:silent default.out -silent_gz -mute all -nstruct 10000 -cpu_run_time 28800 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 1379345
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Using previously extracted minirosetta_database.
Unpacking WU data ...
Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/TL00000015_data.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00025
Continuing computation from checkpoint: chk_S_00000025_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000025_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000025_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000025_ClassicAbinitio__stage_3_iter1_2 ... success! 
Continuing computation from checkpoint: chk_S_00000025_ClassicAbinitio__stage_3_iter1_3 ... success! 
Continuing computation from checkpoint: chk_S_00000025_ClassicAbinitio__stage_3_iter1_4 ... success! 
Continuing computation from checkpoint: chk_S_00000025_ClassicAbinitio__stage_3_iter1_5 ... success! 
Continuing computation from checkpoint: chk_S_00000025_ClassicAbinitio__stage_3_iter1_6 ... success! 
Continuing computation from checkpoint: chk_S_00000025_ClassicAbinitio__stage_3_iter1_7 ... success! 
Continuing computation from checkpoint: chk_S_00000025_ClassicAbinitio__stage_3_iter1_8 ... success! 
Continuing computation from checkpoint: chk_S_00000025_ClassicAbinitio__stage_3_iter1_9 ... success! 
Starting work on structure: _00026
Starting work on structure: _00027
Starting work on structure: _00028
Starting work on structure: _00029
Starting work on structure: _00030
Starting work on structure: _00031
Starting work on structure: _00032
Starting work on structure: _00033
Starting work on structure: _00034
Starting work on structure: _00035
Starting work on structure: _00036
Starting work on structure: _00037
Starting work on structure: _00038
[2016- 6-24  2:21:21:] :: BOINC:: Initializing ... ok.
[2016- 6-24  2:21:21:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
command: projects/boinc.bakerlab.org_rosetta/minirosetta_3.73_windows_x86_64.exe -abinitio::fastrelax 1 -ex2aro 1 -frag3 00001.200.3mers -in:file:native 00001.pdb -silent_gz 1 -frag9 00001.200.9mers -out:file:silent default.out -ex1 1 -abinitio::rsd_wt_loop 0.5 -relax::default_repeats 15 -abinitio::use_filters false -abinitio::increase_cycles 10 -abinitio::rsd_wt_helix 0.5 -abinitio::rg_reweight 0.5 -in:file:boinc_wu_zip TL00000015_data.zip -out:file:silent default.out -silent_gz -mute all -nstruct 10000 -cpu_run_time 28800 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 1379345
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Using previously extracted minirosetta_database.
Unpacking WU data ...
Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/TL00000015_data.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00038
Starting work on structure: _00039
Starting work on structure: _00040
[2016- 6-24  3: 5:16:] :: BOINC:: Initializing ... ok.
[2016- 6-24  3: 5:16:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
command: projects/boinc.bakerlab.org_rosetta/minirosetta_3.73_windows_x86_64.exe -abinitio::fastrelax 1 -ex2aro 1 -frag3 00001.200.3mers -in:file:native 00001.pdb -silent_gz 1 -frag9 00001.200.9mers -out:file:silent default.out -ex1 1 -abinitio::rsd_wt_loop 0.5 -relax::default_repeats 15 -abinitio::use_filters false -abinitio::increase_cycles 10 -abinitio::rsd_wt_helix 0.5 -abinitio::rg_reweight 0.5 -in:file:boinc_wu_zip TL00000015_data.zip -out:file:silent default.out -silent_gz -mute all -nstruct 10000 -cpu_run_time 28800 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 1379345
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Using previously extracted minirosetta_database.
Unpacking WU data ...
Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/TL00000015_data.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00040
Continuing computation from checkpoint: chk_S_00000040_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000040_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000040_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000040_ClassicAbinitio__stage_3_iter1_2 ... success! 
Continuing computation from checkpoint: chk_S_00000040_ClassicAbinitio__stage_3_iter1_3 ... success! 
Continuing computation from checkpoint: chk_S_00000040_ClassicAbinitio__stage_3_iter1_4 ... success! 
Continuing computation from checkpoint: chk_S_00000040_ClassicAbinitio__stage_3_iter1_5 ... success! 
Continuing computation from checkpoint: chk_S_00000040_ClassicAbinitio__stage_3_iter1_6 ... success! 
Continuing computation from checkpoint: chk_S_00000040_ClassicAbinitio__stage_3_iter1_7 ... success! 
Starting work on structure: _00041
Starting work on structure: _00042
[2016- 6-24  3:42:27:] :: BOINC:: Initializing ... ok.
[2016- 6-24  3:42:27:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
command: projects/boinc.bakerlab.org_rosetta/minirosetta_3.73_windows_x86_64.exe -abinitio::fastrelax 1 -ex2aro 1 -frag3 00001.200.3mers -in:file:native 00001.pdb -silent_gz 1 -frag9 00001.200.9mers -out:file:silent default.out -ex1 1 -abinitio::rsd_wt_loop 0.5 -relax::default_repeats 15 -abinitio::use_filters false -abinitio::increase_cycles 10 -abinitio::rsd_wt_helix 0.5 -abinitio::rg_reweight 0.5 -in:file:boinc_wu_zip TL00000015_data.zip -out:file:silent default.out -silent_gz -mute all -nstruct 10000 -cpu_run_time 28800 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 1379345
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Using previously extracted minirosetta_database.
Unpacking WU data ...
Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/TL00000015_data.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00042
Continuing computation from checkpoint: chk_S_00000042_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000042_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000042_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000042_ClassicAbinitio__stage_3_iter1_2 ... success! 
Continuing computation from checkpoint: chk_S_00000042_ClassicAbinitio__stage_3_iter1_3 ... success! 
Continuing computation from checkpoint: chk_S_00000042_ClassicAbinitio__stage_3_iter1_4 ... success! 
Continuing computation from checkpoint: chk_S_00000042_ClassicAbinitio__stage_3_iter1_5 ... success! 
Continuing computation from checkpoint: chk_S_00000042_ClassicAbinitio__stage_3_iter1_6 ... success! 
Continuing computation from checkpoint: chk_S_00000042_ClassicAbinitio__stage_3_iter1_7 ... success! 
Continuing computation from checkpoint: chk_S_00000042_ClassicAbinitio__stage_3_iter1_8 ... success! 
Continuing computation from checkpoint: chk_S_00000042_ClassicAbinitio__stage_3_iter1_9 ... success! 
Continuing computation from checkpoint: chk_S_00000042_ClassicAbinitio__stage_3_iter1_10 ... success! 
Continuing computation from checkpoint: chk_S_00000042_ClassicAbinitio__stage4_kk_1 ... success! 
Continuing computation from checkpoint: chk_S_00000042_ClassicAbinitio__stage4_kk_2 ... success! 
Starting work on structure: _00043
Starting work on structure: _00044
Starting work on structure: _00045
Starting work on structure: _00046
Starting work on structure: _00047
Starting work on structure: _00048
Starting work on structure: _00049
Starting work on structure: _00050
Starting work on structure: _00051
Starting work on structure: _00052
[2016- 7- 1 20:49:27:] :: BOINC:: Initializing ... ok.
[2016- 7- 1 20:49:27:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully. 
command: projects/boinc.bakerlab.org_rosetta/minirosetta_3.73_windows_x86_64.exe -abinitio::fastrelax 1 -ex2aro 1 -frag3 00001.200.3mers -in:file:native 00001.pdb -silent_gz 1 -frag9 00001.200.9mers -out:file:silent default.out -ex1 1 -abinitio::rsd_wt_loop 0.5 -relax::default_repeats 15 -abinitio::use_filters false -abinitio::increase_cycles 10 -abinitio::rsd_wt_helix 0.5 -abinitio::rg_reweight 0.5 -in:file:boinc_wu_zip TL00000015_data.zip -out:file:silent default.out -silent_gz -mute all -nstruct 10000 -cpu_run_time 28800 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 1379345
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Setting WU description ...
Using previously extracted minirosetta_database.
Unpacking WU data ...
Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/TL00000015_data.zip
Setting database description ...
Setting up checkpointing ...
Setting up graphics native ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00052
Continuing computation from checkpoint: chk_S_00000052_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000052_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000052_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000052_ClassicAbinitio__stage_3_iter1_2 ... success! 
Continuing computation from checkpoint: chk_S_00000052_ClassicAbinitio__stage_3_iter1_3 ... success! 
Starting work on structure: _00053
Starting work on structure: _00054
Starting work on structure: _00055
======================================================
DONE ::     1 starting structures    28615 cpu seconds
This process generated     55 decoys from      55 attempts
======================================================
BOINC :: WS_max 2.5942e+008

BOINC :: Watchdog shutting down...
BOINC :: BOINC support services shutting down cleanly ...
called boinc_finish

</stderr_txt>
]]>




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