Task 1625951915

Name RosettaVS_SAVE_ALL_OUT_NOJRAN_betaTrCP_frame_1631_fulldb_IGNORE_THE_REST_M4KHU9_10_862_3022849_3_1
Workunit 1446472634
Created 26 Dec 2025, 5:16:57 UTC
Sent 26 Dec 2025, 5:36:47 UTC
Report deadline 29 Dec 2025, 5:36:47 UTC
Received 27 Dec 2025, 6:30:45 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 6347034
Run time 1 hours 52 min 25 sec
CPU time 1 hours 52 min 17 sec
Validate state Valid
Credit 196.20
Device peak FLOPS 8.26 GFLOPS
Application version Rosetta Beta v6.06
x86_64-pc-linux-gnu
Peak working set size 1,009.74 MB
Peak swap size 1,155.86 MB
Peak disk usage 24.66 MB

Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
command: ../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu @betaTrCP_frame_1631_fulldb_M4KHU9_10_862.flags -nstruct 10000 -cpu_run_time 28800 -boinc:max_nstruct 20000 -checkpoint_interval 120 -mute all -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -boinc::cpu_run_timeout 36000 -run::rng mt19937
Using database: database_f5ae1de8e1/database
Starting watchdog...
Watchdog active.

[ ERROR ]: Caught exception:


File: src/core/kinematics/Stub.cc:106
Error in Stub::from_four_points(): 

File: src/numeric/xyzVector.hh:654
Cannot create normalized xyzVector from vector of length() zero.  Error occurred when trying to normalize the vector between points A and B.  A=[-22105741322687250941607936.000000,16218894002990846857707520.000000,32919612317888729577422848.000000], B=[-22105741322687250941607936.000000,16218894002990846857707520.000000,32919612317888729577422848.000000].
 ------------------------ Begin developer's backtrace ------------------------- 
BACKTRACE:
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x85813e4) [0x562a8de1f3e4]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x8599fb4) [0x562a8de37fb4]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0xc050e1) [0x562a864a30e1]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x762802f) [0x562a8cec602f]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x7639cbf) [0x562a8ced7cbf]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x32941fe) [0x562a88b321fe]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x6232f32) [0x562a8bad0f32]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x5ae370e) [0x562a8b38170e]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x5ae9c95) [0x562a8b387c95]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x32a05ae) [0x562a88b3e5ae]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x32a08bd) [0x562a88b3e8bd]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x32ab7fe) [0x562a88b497fe]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x32b3eac) [0x562a88b51eac]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x318962c) [0x562a88a2762c]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x318f35c) [0x562a88a2d35c]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x57d84d1) [0x562a8b0764d1]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x57d8bae) [0x562a8b076bae]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x57d911e) [0x562a8b07711e]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x57da356) [0x562a8b078356]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x5539fda) [0x562a8add7fda]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x553b4fe) [0x562a8add94fe]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x5853b97) [0x562a8b0f1b97]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x585255a) [0x562a8b0f055a]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0xce0773) [0x562a8657e773]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90) [0x7f946ba4cd90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80) [0x7f946ba4ce40]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0xf22fca) [0x562a867c0fca]
 ------------------------- End developer's backtrace -------------------------- 

[ ERROR ]: Caught exception:


File: src/core/kinematics/Stub.cc:106
Error in Stub::from_four_points(): 

File: src/numeric/xyzVector.hh:654
Cannot create normalized xyzVector from vector of length() zero.  Error occurred when trying to normalize the vector between points A and B.  A=[285611794933463565402704336388096.000000,-444945496560582995703673166757888.000000,203477098485992343332143367192576.000000], B=[285611794933463565402704336388096.000000,-444945496560582995703673166757888.000000,203477098485992343332143367192576.000000].
 ------------------------ Begin developer's backtrace ------------------------- 
BACKTRACE:
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x85813e4) [0x562a8de1f3e4]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x8599fb4) [0x562a8de37fb4]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0xc050e1) [0x562a864a30e1]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x762802f) [0x562a8cec602f]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x7639cbf) [0x562a8ced7cbf]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x32941fe) [0x562a88b321fe]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x6232f32) [0x562a8bad0f32]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x5ae370e) [0x562a8b38170e]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x5ae9c95) [0x562a8b387c95]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x32a05ae) [0x562a88b3e5ae]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x32a08bd) [0x562a88b3e8bd]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x32ab7fe) [0x562a88b497fe]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x32b3eac) [0x562a88b51eac]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x318962c) [0x562a88a2762c]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x318f35c) [0x562a88a2d35c]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x57d84d1) [0x562a8b0764d1]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x57d8bae) [0x562a8b076bae]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x57d911e) [0x562a8b07711e]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x57da356) [0x562a8b078356]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x5539fda) [0x562a8add7fda]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x553b4fe) [0x562a8add94fe]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x5853b97) [0x562a8b0f1b97]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x585255a) [0x562a8b0f055a]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0xce0773) [0x562a8657e773]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90) [0x7f946ba4cd90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80) [0x7f946ba4ce40]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0xf22fca) [0x562a867c0fca]
 ------------------------- End developer's backtrace -------------------------- 
======================================================
DONE ::     5 starting structures  6737.58 cpu seconds
This process generated      5 decoys from       5 attempts
======================================================
BOINC :: WS_max 1.05879e+09

BOINC :: Watchdog shutting down...
06:30:31 (2490146): called boinc_finish(0)

</stderr_txt>
]]>




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