Task 1625524510

Name RosettaVS_SAVE_ALL_OUT_NOJRAN_betaTrCP_frame_1631_fulldb_IGNORE_THE_REST_M4KHU9_7_3884_3022856_2_0
Workunit 1446120451
Created 23 Dec 2025, 19:40:38 UTC
Sent 23 Dec 2025, 20:09:57 UTC
Report deadline 26 Dec 2025, 20:09:57 UTC
Received 26 Dec 2025, 2:15:42 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 6244978
Run time 8 hours 39 min 31 sec
CPU time 7 hours 49 min 12 sec
Validate state Valid
Credit 312.47
Device peak FLOPS 4.33 GFLOPS
Application version Rosetta Beta v6.06
x86_64-pc-linux-gnu
Peak working set size 985.82 MB
Peak swap size 1,137.10 MB
Peak disk usage 25.68 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
command: ../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu @betaTrCP_frame_1631_fulldb_M4KHU9_7_3884.flags -nstruct 10000 -cpu_run_time 28800 -boinc:max_nstruct 20000 -checkpoint_interval 120 -mute all -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -boinc::cpu_run_timeout 36000 -run::rng mt19937
Using database: database_f5ae1de8e1/database
Starting watchdog...
Watchdog active.

[ ERROR ]: Caught exception:


File: src/core/kinematics/Stub.cc:106
Error in Stub::from_four_points(): 

File: src/numeric/xyzVector.hh:654
Cannot create normalized xyzVector from vector of length() zero.  Error occurred when trying to normalize the vector between points A and B.  A=[10043869668433230.000000,-22082441556615288.000000,-2539801139145366.000000], B=[10043869668433230.000000,-22082441556615288.000000,-2539801139145366.000000].
 ------------------------ Begin developer's backtrace ------------------------- 
BACKTRACE:
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x85813e4) [0x5691f953e3e4]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x8599fb4) [0x5691f9556fb4]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0xc050e1) [0x5691f1bc20e1]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x762802f) [0x5691f85e502f]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x7639cbf) [0x5691f85f6cbf]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x32941fe) [0x5691f42511fe]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x6232f32) [0x5691f71eff32]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x5ae370e) [0x5691f6aa070e]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x5ae9c95) [0x5691f6aa6c95]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x3260853) [0x5691f421d853]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x317c2e4) [0x5691f41392e4]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x31895bc) [0x5691f41465bc]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x318f35c) [0x5691f414c35c]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x57d84d1) [0x5691f67954d1]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x57d8bae) [0x5691f6795bae]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x57d911e) [0x5691f679611e]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x57da356) [0x5691f6797356]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x5539fda) [0x5691f64f6fda]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x553b4fe) [0x5691f64f84fe]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x5853b97) [0x5691f6810b97]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x585255a) [0x5691f680f55a]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0xce0773) [0x5691f1c9d773]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca) [0x790d5982a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b) [0x790d5982a28b]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0xf22fca) [0x5691f1edffca]
 ------------------------- End developer's backtrace -------------------------- 

[ ERROR ]: Caught exception:


File: src/core/kinematics/Stub.cc:106
Error in Stub::from_four_points(): 

File: src/numeric/xyzVector.hh:654
Cannot create normalized xyzVector from vector of length() zero.  Error occurred when trying to normalize the vector between points A and B.  A=[119710069698589323232552668889088.000000,1344710463382751674802395676672.000000,11347953761371384138808606851072.000000], B=[119710069698589323232552668889088.000000,1344710463382751674802395676672.000000,11347953761371384138808606851072.000000].
 ------------------------ Begin developer's backtrace ------------------------- 
BACKTRACE:
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x85813e4) [0x5691f953e3e4]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x8599fb4) [0x5691f9556fb4]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0xc050e1) [0x5691f1bc20e1]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x762802f) [0x5691f85e502f]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x7639cbf) [0x5691f85f6cbf]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x32941fe) [0x5691f42511fe]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x6232f32) [0x5691f71eff32]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x5ae370e) [0x5691f6aa070e]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x5ae9c95) [0x5691f6aa6c95]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x32a05ae) [0x5691f425d5ae]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x32a08bd) [0x5691f425d8bd]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x32ab7fe) [0x5691f42687fe]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x32b3eac) [0x5691f4270eac]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x318962c) [0x5691f414662c]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x318f35c) [0x5691f414c35c]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x57d84d1) [0x5691f67954d1]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x57d8bae) [0x5691f6795bae]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x57d911e) [0x5691f679611e]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x57da356) [0x5691f6797356]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x5539fda) [0x5691f64f6fda]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x553b4fe) [0x5691f64f84fe]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x5853b97) [0x5691f6810b97]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x585255a) [0x5691f680f55a]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0xce0773) [0x5691f1c9d773]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca) [0x790d5982a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b) [0x790d5982a28b]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0xf22fca) [0x5691f1edffca]
 ------------------------- End developer's backtrace -------------------------- 
======================================================
DONE ::    16 starting structures  28152.2 cpu seconds
This process generated     16 decoys from      16 attempts
======================================================
BOINC :: WS_max 1.03371e+09

BOINC :: Watchdog shutting down...
13:15:29 (173780): called boinc_finish(0)

</stderr_txt>
]]>




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