Task 1625025626

Name RosettaVS_SAVE_ALL_OUT_NOJRAN_M1_real_specificity_fulldb_IGNORE_THE_REST_ZT9ExJ_10_2073_3022829_3_1
Workunit 1445642787
Created 20 Dec 2025, 15:28:03 UTC
Sent 20 Dec 2025, 15:28:07 UTC
Report deadline 23 Dec 2025, 15:28:07 UTC
Received 23 Dec 2025, 14:34:22 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 6331983
Run time 2 days 23 hours 5 min 20 sec
CPU time 1 days 11 hours 50 min 23 sec
Validate state Valid
Credit 3,045.93
Device peak FLOPS 5.64 GFLOPS
Application version Rosetta Beta v6.06
x86_64-pc-linux-gnu
Peak working set size 1,385.01 MB
Peak swap size 1,538.01 MB
Peak disk usage 27.19 MB

Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
command: ../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu @M1_real_specificity_fulldb_ZT9ExJ_10_2073.flags -nstruct 10000 -cpu_run_time 28800 -boinc:max_nstruct 20000 -checkpoint_interval 120 -mute all -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -boinc::cpu_run_timeout 36000 -run::rng mt19937
Using database: database_f5ae1de8e1/database
Starting watchdog...
Watchdog active.

[ ERROR ]: Caught exception:


File: src/core/kinematics/Stub.cc:106
Error in Stub::from_four_points(): 

File: src/numeric/xyzVector.hh:654
Cannot create normalized xyzVector from vector of length() zero.  Error occurred when trying to normalize the vector between points A and B.  A=[-24985669606652306012504064.000000,-30152094216182997631107072.000000,70717400048729160933179392.000000], B=[-24985669606652306012504064.000000,-30152094216182997631107072.000000,70717400048729160933179392.000000].
 ------------------------ Begin developer's backtrace ------------------------- 
BACKTRACE:
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x85813e4) [0x55835779e3e4]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x8599fb4) [0x5583577b6fb4]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0xc050e1) [0x55834fe220e1]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x762802f) [0x55835684502f]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x7639cbf) [0x558356856cbf]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x32941fe) [0x5583524b11fe]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x6232f32) [0x55835544ff32]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x5ae370e) [0x558354d0070e]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x5ae9c95) [0x558354d06c95]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x32a05ae) [0x5583524bd5ae]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x32a08bd) [0x5583524bd8bd]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x32ab7fe) [0x5583524c87fe]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x32b3eac) [0x5583524d0eac]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x318962c) [0x5583523a662c]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x318f35c) [0x5583523ac35c]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x57d84d1) [0x5583549f54d1]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x57d8bae) [0x5583549f5bae]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x57d911e) [0x5583549f611e]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x57da356) [0x5583549f7356]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x5539fda) [0x558354756fda]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x553b4fe) [0x5583547584fe]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x5853b97) [0x558354a70b97]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x585255a) [0x558354a6f55a]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0xce0773) [0x55834fefd773]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90) [0x7f647073dd90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80) [0x7f647073de40]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0xf22fca) [0x55835013ffca]
 ------------------------- End developer's backtrace -------------------------- 
======================================================
DONE ::    27 starting structures   129023 cpu seconds
This process generated     27 decoys from      27 attempts
======================================================
BOINC :: WS_max 1.45229e+09

BOINC :: Watchdog shutting down...
09:33:56 (877777): called boinc_finish(0)

</stderr_txt>
]]>




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