Task 1625023762
| Name | RosettaVS_SAVE_ALL_OUT_NOJRAN_M1_real_specificity_fulldb_IGNORE_THE_REST_ZT9ExJ_7_145_3022835_3_1 |
| Workunit | 1445628056 |
| Created | 20 Dec 2025, 13:26:02 UTC |
| Sent | 20 Dec 2025, 13:26:04 UTC |
| Report deadline | 23 Dec 2025, 13:26:04 UTC |
| Received | 21 Dec 2025, 8:12:53 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 6346143 |
| Run time | 8 hours 23 min 19 sec |
| CPU time | 7 hours 52 min 3 sec |
| Validate state | Valid |
| Credit | 726.76 |
| Device peak FLOPS | 7.85 GFLOPS |
| Application version | Rosetta Beta v6.06 x86_64-apple-darwin |
| Peak working set size | 2,299.23 MB |
| Peak swap size | 36,759.32 MB |
| Peak disk usage | 26.25 MB |
Stderr output
<core_client_version>8.2.8</core_client_version> <![CDATA[ <stderr_txt> command: rosetta_beta_6.06_x86_64-apple-darwin @M1_real_specificity_fulldb_ZT9ExJ_7_145.flags -nstruct 10000 -cpu_run_time 28800 -boinc:max_nstruct 20000 -checkpoint_interval 120 -mute all -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -boinc::cpu_run_timeout 36000 -run::rng mt19937 Using database: database_f5ae1de8e1/database Starting watchdog... Watchdog active. [ ERROR ]: Caught exception: File: src/core/kinematics/Stub.cc:106 Error in Stub::from_four_points(): File: src/numeric/xyzVector.hh:654 Cannot create normalized xyzVector from vector of length() zero. Error occurred when trying to normalize the vector between points A and B. A=[-1649178450542589184601155960832.000000,30729851880697415720800771637248.000000,-23691506105708604008855307812864.000000], B=[-1649178450542589184601155960832.000000,30729851880697415720800771637248.000000,-23691506105708604008855307812864.000000]. ------------------------ Begin developer's backtrace ------------------------- BACKTRACE: 0 rosetta_beta_6.06_x86_64-apple-darw 0x00000001096bcec7 backtrace_string(int) + 87 1 rosetta_beta_6.06_x86_64-apple-darw 0x00000001096d0a1d utility::excn::Exception::Exception(char const*, int, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>> const&) + 205 2 rosetta_beta_6.06_x86_64-apple-darw 0x00000001092ad037 core::kinematics::Stub::from_four_points(numeric::xyzVector<double> const&, numeric::xyzVector<double> const&, numeric::xyzVector<double> const&, numeric::xyzVector<double> const&) + 2071 3 rosetta_beta_6.06_x86_64-apple-darw 0x0000000108bfc8cf core::scoring::lkball::LKB_ResidueInfo::build_waters(core::conformation::Residue const&, bool) + 895 4 rosetta_beta_6.06_x86_64-apple-darw 0x0000000108bfc1ae core::scoring::lkball::LKB_ResidueInfo::LKB_ResidueInfo(core::conformation::Residue const&, bool) + 270 5 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062aeb53 std::__1::shared_ptr<core::scoring::lkball::LKB_ResidueInfo> std::__1::shared_ptr<core::scoring::lkball::LKB_ResidueInfo>::make_shared<core::conformation::Residue const&>(core::conformation::Residue const&) + 83 6 rosetta_beta_6.06_x86_64-apple-darw 0x000000010629d7c9 protocols::ligand_docking::ga_ligand_dock::GridScorer::score(core::pose::Pose&, protocols::ligand_docking::ga_ligand_dock::LigandConformer const&, bool) + 777 7 rosetta_beta_6.06_x86_64-apple-darw 0x0000000107ab1642 core::optimization::ArmijoLineMinimization::Armijo(double, core::optimization::func_1d&) + 130 8 rosetta_beta_6.06_x86_64-apple-darw 0x0000000107ab135e core::optimization::ArmijoLineMinimization::operator()(utility::vector1<double, std::__1::allocator<double>>&, utility::vector1<double, std::__1::allocator<double>>&) + 494 9 rosetta_beta_6.06_x86_64-apple-darw 0x0000000107aba0b9 core::optimization::Minimizer::lbfgs(utility::vector1<double, std::__1::allocator<double>>&, double&, core::optimization::ConvergenceTest&, std::__1::shared_ptr<core::optimization::LineMinimizationAlgorithm>, int, bool) const + 3177 10 rosetta_beta_6.06_x86_64-apple-darw 0x0000000107ab502f core::optimization::Minimizer::run(utility::vector1<double, std::__1::allocator<double>>&) + 6975 11 rosetta_beta_6.06_x86_64-apple-darw 0x000000010627c44c protocols::ligand_docking::ga_ligand_dock::LigandAligner::apply(protocols::ligand_docking::ga_ligand_dock::LigandConformer&) + 5308 12 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062dbc1f protocols::ligand_docking::ga_ligand_dock::GALigandDock::generate_perturbed_structures(protocols::ligand_docking::ga_ligand_dock::LigandConformer const&, std::__1::shared_ptr<protocols::ligand_docking::ga_ligand_dock::GridScorer>, unsigned long, protocols::ligand_docking::ga_ligand_dock::LigandAligner) const + 4799 13 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062d4315 protocols::ligand_docking::ga_ligand_dock::GALigandDock::run_docking(protocols::ligand_docking::ga_ligand_dock::LigandConformer const&, std::__1::shared_ptr<protocols::ligand_docking::ga_ligand_dock::GridScorer>, protocols::ligand_docking::ga_ligand_dock::LigandAligner&, protocols::ligand_docking::ga_ligand_dock::OutputStructureStore&) + 357 14 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062ca32e protocols::ligand_docking::ga_ligand_dock::GALigandDock::apply(core::pose::Pose&) + 14846 15 rosetta_beta_6.06_x86_64-apple-darw 0x00000001078bbfd8 protocols::rosetta_scripts::ParsedProtocol::apply_mover(core::pose::Pose&, protocols::rosetta_scripts::ParsedProtocol::ParsedProtocolStep const&) + 1224 16 rosetta_beta_6.06_x86_64-apple-darw 0x00000001078b462f protocols::rosetta_scripts::ParsedProtocol::apply(core::pose::Pose&) + 1935 17 rosetta_beta_6.06_x86_64-apple-darw 0x00000001077a122c protocols::jd2::JobDistributor::run_one_job(std::__1::shared_ptr<protocols::moves::Mover>&, long, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>&, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>&, unsigned long&, unsigned long&, bool) + 8204 18 rosetta_beta_6.06_x86_64-apple-darw 0x000000010779e572 protocols::jd2::JobDistributor::go_main(std::__1::shared_ptr<protocols::moves::Mover>) + 194 19 rosetta_beta_6.06_x86_64-apple-darw 0x0000000107799612 protocols::jd2::FileSystemJobDistributor::go(std::__1::shared_ptr<protocols::moves::Mover>) + 66 20 rosetta_beta_6.06_x86_64-apple-darw 0x000000010778f0e6 protocols::jd2::BOINCJobDistributor::go(std::__1::shared_ptr<protocols::moves::Mover>) + 246 21 rosetta_beta_6.06_x86_64-apple-darw 0x0000000104cdd254 main + 22020 22 dyld 0x000000020d4f4781 start + 3457 ------------------------- End developer's backtrace -------------------------- [ ERROR ]: Caught exception: File: src/core/kinematics/Stub.cc:106 Error in Stub::from_four_points(): File: src/numeric/xyzVector.hh:654 Cannot create normalized xyzVector from vector of length() zero. Error occurred when trying to normalize the vector between points A and B. A=[-140982559995103784916096122880.000000,-170563311688520740533306392576.000000,-13561800052203490279262519296.000000], B=[-140982559995103784916096122880.000000,-170563311688520740533306392576.000000,-13561800052203490279262519296.000000]. ------------------------ Begin developer's backtrace ------------------------- BACKTRACE: 0 rosetta_beta_6.06_x86_64-apple-darw 0x00000001096bcec7 backtrace_string(int) + 87 1 rosetta_beta_6.06_x86_64-apple-darw 0x00000001096d0a1d utility::excn::Exception::Exception(char const*, int, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>> const&) + 205 2 rosetta_beta_6.06_x86_64-apple-darw 0x00000001092ad037 core::kinematics::Stub::from_four_points(numeric::xyzVector<double> const&, numeric::xyzVector<double> const&, numeric::xyzVector<double> const&, numeric::xyzVector<double> const&) + 2071 3 rosetta_beta_6.06_x86_64-apple-darw 0x0000000108bfc8cf core::scoring::lkball::LKB_ResidueInfo::build_waters(core::conformation::Residue const&, bool) + 895 4 rosetta_beta_6.06_x86_64-apple-darw 0x0000000108bfc1ae core::scoring::lkball::LKB_ResidueInfo::LKB_ResidueInfo(core::conformation::Residue const&, bool) + 270 5 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062aeb53 std::__1::shared_ptr<core::scoring::lkball::LKB_ResidueInfo> std::__1::shared_ptr<core::scoring::lkball::LKB_ResidueInfo>::make_shared<core::conformation::Residue const&>(core::conformation::Residue const&) + 83 6 rosetta_beta_6.06_x86_64-apple-darw 0x000000010629d7c9 protocols::ligand_docking::ga_ligand_dock::GridScorer::score(core::pose::Pose&, protocols::ligand_docking::ga_ligand_dock::LigandConformer const&, bool) + 777 7 rosetta_beta_6.06_x86_64-apple-darw 0x0000000107ab1642 core::optimization::ArmijoLineMinimization::Armijo(double, core::optimization::func_1d&) + 130 8 rosetta_beta_6.06_x86_64-apple-darw 0x0000000107ab135e core::optimization::ArmijoLineMinimization::operator()(utility::vector1<double, std::__1::allocator<double>>&, utility::vector1<double, std::__1::allocator<double>>&) + 494 9 rosetta_beta_6.06_x86_64-apple-darw 0x0000000107aba0b9 core::optimization::Minimizer::lbfgs(utility::vector1<double, std::__1::allocator<double>>&, double&, core::optimization::ConvergenceTest&, std::__1::shared_ptr<core::optimization::LineMinimizationAlgorithm>, int, bool) const + 3177 10 rosetta_beta_6.06_x86_64-apple-darw 0x0000000107ab502f core::optimization::Minimizer::run(utility::vector1<double, std::__1::allocator<double>>&) + 6975 11 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062ac52c protocols::ligand_docking::ga_ligand_dock::GridScorer::minimizer_loop(protocols::ligand_docking::ga_ligand_dock::LigandConformer&, core::optimization::MinimizerOptions const&) + 1884 12 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062a9770 protocols::ligand_docking::ga_ligand_dock::GridScorer::optimize(protocols::ligand_docking::ga_ligand_dock::LigandConformer&, utility::vector1<double, std::__1::allocator<double>>, utility::vector1<utility::vector1<protocols::ligand_docking::ga_ligand_dock::PlaceableRotamer, std::__1::allocator<protocols::ligand_docking::ga_ligand_dock::PlaceableRotamer>>, std::__1::allocator<utility::vector1<protocols::ligand_docking::ga_ligand_dock::PlaceableRotamer, std::__1::allocator<protocols::ligand_docking::ga_ligand_dock::PlaceableRotamer>>>>&, protocols::ligand_docking::ga_ligand_dock::RotamerPairEnergies&) + 752 13 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062b64b4 protocols::ligand_docking::ga_ligand_dock::GAOptimizer::optimize_generation(utility::vector1<protocols::ligand_docking::ga_ligand_dock::LigandConformer, std::__1::allocator<protocols::ligand_docking::ga_ligand_dock::LigandConformer>>&, utility::vector1<double, std::__1::allocator<double>> const&) + 356 14 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062afe52 protocols::ligand_docking::ga_ligand_dock::GAOptimizer::run(utility::vector1<protocols::ligand_docking::ga_ligand_dock::LigandConformer, std::__1::allocator<protocols::ligand_docking::ga_ligand_dock::LigandConformer>>&) + 2850 15 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062d447b protocols::ligand_docking::ga_ligand_dock::GALigandDock::run_docking(protocols::ligand_docking::ga_ligand_dock::LigandConformer const&, std::__1::shared_ptr<protocols::ligand_docking::ga_ligand_dock::GridScorer>, protocols::ligand_docking::ga_ligand_dock::LigandAligner&, protocols::ligand_docking::ga_ligand_dock::OutputStructureStore&) + 715 16 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062ca32e protocols::ligand_docking::ga_ligand_dock::GALigandDock::apply(core::pose::Pose&) + 14846 17 rosetta_beta_6.06_x86_64-apple-darw 0x00000001078bbfd8 protocols::rosetta_scripts::ParsedProtocol::apply_mover(core::pose::Pose&, protocols::rosetta_scripts::ParsedProtocol::ParsedProtocolStep const&) + 1224 18 rosetta_beta_6.06_x86_64-apple-darw 0x00000001078b462f protocols::rosetta_scripts::ParsedProtocol::apply(core::pose::Pose&) + 1935 19 rosetta_beta_6.06_x86_64-apple-darw 0x00000001077a122c protocols::jd2::JobDistributor::run_one_job(std::__1::shared_ptr<protocols::moves::Mover>&, long, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>&, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>&, unsigned long&, unsigned long&, bool) + 8204 20 rosetta_beta_6.06_x86_64-apple-darw 0x000000010779e572 protocols::jd2::JobDistributor::go_main(std::__1::shared_ptr<protocols::moves::Mover>) + 194 21 rosetta_beta_6.06_x86_64-apple-darw 0x0000000107799612 protocols::jd2::FileSystemJobDistributor::go(std::__1::shared_ptr<protocols::moves::Mover>) + 66 22 rosetta_beta_6.06_x86_64-apple-darw 0x000000010778f0e6 protocols::jd2::BOINCJobDistributor::go(std::__1::shared_ptr<protocols::moves::Mover>) + 246 23 rosetta_beta_6.06_x86_64-apple-darw 0x0000000104cdd254 main + 22020 24 dyld 0x000000020d4f4781 start + 3457 ------------------------- End developer's backtrace -------------------------- [ ERROR ]: Caught exception: File: src/core/kinematics/Stub.cc:106 Error in Stub::from_four_points(): File: src/numeric/xyzVector.hh:654 Cannot create normalized xyzVector from vector of length() zero. Error occurred when trying to normalize the vector between points A and B. A=[-2251799813685261.000000,34293706554166935608690615517184.000000,21020144925227229767252230275072.000000], B=[-2251799813685261.000000,34293706554166935608690615517184.000000,21020144925227229767252230275072.000000]. ------------------------ Begin developer's backtrace ------------------------- BACKTRACE: 0 rosetta_beta_6.06_x86_64-apple-darw 0x00000001096bcec7 backtrace_string(int) + 87 1 rosetta_beta_6.06_x86_64-apple-darw 0x00000001096d0a1d utility::excn::Exception::Exception(char const*, int, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>> const&) + 205 2 rosetta_beta_6.06_x86_64-apple-darw 0x00000001092ad037 core::kinematics::Stub::from_four_points(numeric::xyzVector<double> const&, numeric::xyzVector<double> const&, numeric::xyzVector<double> const&, numeric::xyzVector<double> const&) + 2071 3 rosetta_beta_6.06_x86_64-apple-darw 0x0000000108bfc8cf core::scoring::lkball::LKB_ResidueInfo::build_waters(core::conformation::Residue const&, bool) + 895 4 rosetta_beta_6.06_x86_64-apple-darw 0x0000000108bfc1ae core::scoring::lkball::LKB_ResidueInfo::LKB_ResidueInfo(core::conformation::Residue const&, bool) + 270 5 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062aeb53 std::__1::shared_ptr<core::scoring::lkball::LKB_ResidueInfo> std::__1::shared_ptr<core::scoring::lkball::LKB_ResidueInfo>::make_shared<core::conformation::Residue const&>(core::conformation::Residue const&) + 83 6 rosetta_beta_6.06_x86_64-apple-darw 0x000000010629d7c9 protocols::ligand_docking::ga_ligand_dock::GridScorer::score(core::pose::Pose&, protocols::ligand_docking::ga_ligand_dock::LigandConformer const&, bool) + 777 7 rosetta_beta_6.06_x86_64-apple-darw 0x0000000107ab1642 core::optimization::ArmijoLineMinimization::Armijo(double, core::optimization::func_1d&) + 130 8 rosetta_beta_6.06_x86_64-apple-darw 0x0000000107ab135e core::optimization::ArmijoLineMinimization::operator()(utility::vector1<double, std::__1::allocator<double>>&, utility::vector1<double, std::__1::allocator<double>>&) + 494 9 rosetta_beta_6.06_x86_64-apple-darw 0x0000000107aba0b9 core::optimization::Minimizer::lbfgs(utility::vector1<double, std::__1::allocator<double>>&, double&, core::optimization::ConvergenceTest&, std::__1::shared_ptr<core::optimization::LineMinimizationAlgorithm>, int, bool) const + 3177 10 rosetta_beta_6.06_x86_64-apple-darw 0x0000000107ab502f core::optimization::Minimizer::run(utility::vector1<double, std::__1::allocator<double>>&) + 6975 11 rosetta_beta_6.06_x86_64-apple-darw 0x000000010627c44c protocols::ligand_docking::ga_ligand_dock::LigandAligner::apply(protocols::ligand_docking::ga_ligand_dock::LigandConformer&) + 5308 12 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062dbc1f protocols::ligand_docking::ga_ligand_dock::GALigandDock::generate_perturbed_structures(protocols::ligand_docking::ga_ligand_dock::LigandConformer const&, std::__1::shared_ptr<protocols::ligand_docking::ga_ligand_dock::GridScorer>, unsigned long, protocols::ligand_docking::ga_ligand_dock::LigandAligner) const + 4799 13 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062d4315 protocols::ligand_docking::ga_ligand_dock::GALigandDock::run_docking(protocols::ligand_docking::ga_ligand_dock::LigandConformer const&, std::__1::shared_ptr<protocols::ligand_docking::ga_ligand_dock::GridScorer>, protocols::ligand_docking::ga_ligand_dock::LigandAligner&, protocols::ligand_docking::ga_ligand_dock::OutputStructureStore&) + 357 14 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062ca32e protocols::ligand_docking::ga_ligand_dock::GALigandDock::apply(core::pose::Pose&) + 14846 15 rosetta_beta_6.06_x86_64-apple-darw 0x00000001078bbfd8 protocols::rosetta_scripts::ParsedProtocol::apply_mover(core::pose::Pose&, protocols::rosetta_scripts::ParsedProtocol::ParsedProtocolStep const&) + 1224 16 rosetta_beta_6.06_x86_64-apple-darw 0x00000001078b462f protocols::rosetta_scripts::ParsedProtocol::apply(core::pose::Pose&) + 1935 17 rosetta_beta_6.06_x86_64-apple-darw 0x00000001077a122c protocols::jd2::JobDistributor::run_one_job(std::__1::shared_ptr<protocols::moves::Mover>&, long, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>&, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>&, unsigned long&, unsigned long&, bool) + 8204 18 rosetta_beta_6.06_x86_64-apple-darw 0x000000010779e572 protocols::jd2::JobDistributor::go_main(std::__1::shared_ptr<protocols::moves::Mover>) + 194 19 rosetta_beta_6.06_x86_64-apple-darw 0x0000000107799612 protocols::jd2::FileSystemJobDistributor::go(std::__1::shared_ptr<protocols::moves::Mover>) + 66 20 rosetta_beta_6.06_x86_64-apple-darw 0x000000010778f0e6 protocols::jd2::BOINCJobDistributor::go(std::__1::shared_ptr<protocols::moves::Mover>) + 246 21 rosetta_beta_6.06_x86_64-apple-darw 0x0000000104cdd254 main + 22020 22 dyld 0x000000020d4f4781 start + 3457 ------------------------- End developer's backtrace -------------------------- [ ERROR ]: Caught exception: File: src/core/kinematics/Stub.cc:106 Error in Stub::from_four_points(): File: src/numeric/xyzVector.hh:654 Cannot create normalized xyzVector from vector of length() zero. Error occurred when trying to normalize the vector between points A and B. A=[-53358906890594263488710903332864.000000,32262921100035071747117258113024.000000,-39862887818170311121468255109120.000000], B=[-53358906890594263488710903332864.000000,32262921100035071747117258113024.000000,-39862887818170311121468255109120.000000]. ------------------------ Begin developer's backtrace ------------------------- BACKTRACE: 0 rosetta_beta_6.06_x86_64-apple-darw 0x00000001096bcec7 backtrace_string(int) + 87 1 rosetta_beta_6.06_x86_64-apple-darw 0x00000001096d0a1d utility::excn::Exception::Exception(char const*, int, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>> const&) + 205 2 rosetta_beta_6.06_x86_64-apple-darw 0x00000001092ad037 core::kinematics::Stub::from_four_points(numeric::xyzVector<double> const&, numeric::xyzVector<double> const&, numeric::xyzVector<double> const&, numeric::xyzVector<double> const&) + 2071 3 rosetta_beta_6.06_x86_64-apple-darw 0x0000000108bfc8cf core::scoring::lkball::LKB_ResidueInfo::build_waters(core::conformation::Residue const&, bool) + 895 4 rosetta_beta_6.06_x86_64-apple-darw 0x0000000108bfc1ae core::scoring::lkball::LKB_ResidueInfo::LKB_ResidueInfo(core::conformation::Residue const&, bool) + 270 5 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062aeb53 std::__1::shared_ptr<core::scoring::lkball::LKB_ResidueInfo> std::__1::shared_ptr<core::scoring::lkball::LKB_ResidueInfo>::make_shared<core::conformation::Residue const&>(core::conformation::Residue const&) + 83 6 rosetta_beta_6.06_x86_64-apple-darw 0x000000010629d7c9 protocols::ligand_docking::ga_ligand_dock::GridScorer::score(core::pose::Pose&, protocols::ligand_docking::ga_ligand_dock::LigandConformer const&, bool) + 777 7 rosetta_beta_6.06_x86_64-apple-darw 0x0000000107ab1642 core::optimization::ArmijoLineMinimization::Armijo(double, core::optimization::func_1d&) + 130 8 rosetta_beta_6.06_x86_64-apple-darw 0x0000000107ab135e core::optimization::ArmijoLineMinimization::operator()(utility::vector1<double, std::__1::allocator<double>>&, utility::vector1<double, std::__1::allocator<double>>&) + 494 9 rosetta_beta_6.06_x86_64-apple-darw 0x0000000107aba0b9 core::optimization::Minimizer::lbfgs(utility::vector1<double, std::__1::allocator<double>>&, double&, core::optimization::ConvergenceTest&, std::__1::shared_ptr<core::optimization::LineMinimizationAlgorithm>, int, bool) const + 3177 10 rosetta_beta_6.06_x86_64-apple-darw 0x0000000107ab502f core::optimization::Minimizer::run(utility::vector1<double, std::__1::allocator<double>>&) + 6975 11 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062ac52c protocols::ligand_docking::ga_ligand_dock::GridScorer::minimizer_loop(protocols::ligand_docking::ga_ligand_dock::LigandConformer&, core::optimization::MinimizerOptions const&) + 1884 12 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062a9770 protocols::ligand_docking::ga_ligand_dock::GridScorer::optimize(protocols::ligand_docking::ga_ligand_dock::LigandConformer&, utility::vector1<double, std::__1::allocator<double>>, utility::vector1<utility::vector1<protocols::ligand_docking::ga_ligand_dock::PlaceableRotamer, std::__1::allocator<protocols::ligand_docking::ga_ligand_dock::PlaceableRotamer>>, std::__1::allocator<utility::vector1<protocols::ligand_docking::ga_ligand_dock::PlaceableRotamer, std::__1::allocator<protocols::ligand_docking::ga_ligand_dock::PlaceableRotamer>>>>&, protocols::ligand_docking::ga_ligand_dock::RotamerPairEnergies&) + 752 13 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062b64b4 protocols::ligand_docking::ga_ligand_dock::GAOptimizer::optimize_generation(utility::vector1<protocols::ligand_docking::ga_ligand_dock::LigandConformer, std::__1::allocator<protocols::ligand_docking::ga_ligand_dock::LigandConformer>>&, utility::vector1<double, std::__1::allocator<double>> const&) + 356 14 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062afe52 protocols::ligand_docking::ga_ligand_dock::GAOptimizer::run(utility::vector1<protocols::ligand_docking::ga_ligand_dock::LigandConformer, std::__1::allocator<protocols::ligand_docking::ga_ligand_dock::LigandConformer>>&) + 2850 15 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062d447b protocols::ligand_docking::ga_ligand_dock::GALigandDock::run_docking(protocols::ligand_docking::ga_ligand_dock::LigandConformer const&, std::__1::shared_ptr<protocols::ligand_docking::ga_ligand_dock::GridScorer>, protocols::ligand_docking::ga_ligand_dock::LigandAligner&, protocols::ligand_docking::ga_ligand_dock::OutputStructureStore&) + 715 16 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062ca32e protocols::ligand_docking::ga_ligand_dock::GALigandDock::apply(core::pose::Pose&) + 14846 17 rosetta_beta_6.06_x86_64-apple-darw 0x00000001078bbfd8 protocols::rosetta_scripts::ParsedProtocol::apply_mover(core::pose::Pose&, protocols::rosetta_scripts::ParsedProtocol::ParsedProtocolStep const&) + 1224 18 rosetta_beta_6.06_x86_64-apple-darw 0x00000001078b462f protocols::rosetta_scripts::ParsedProtocol::apply(core::pose::Pose&) + 1935 19 rosetta_beta_6.06_x86_64-apple-darw 0x00000001077a122c protocols::jd2::JobDistributor::run_one_job(std::__1::shared_ptr<protocols::moves::Mover>&, long, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>&, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>&, unsigned long&, unsigned long&, bool) + 8204 20 rosetta_beta_6.06_x86_64-apple-darw 0x000000010779e572 protocols::jd2::JobDistributor::go_main(std::__1::shared_ptr<protocols::moves::Mover>) + 194 21 rosetta_beta_6.06_x86_64-apple-darw 0x0000000107799612 protocols::jd2::FileSystemJobDistributor::go(std::__1::shared_ptr<protocols::moves::Mover>) + 66 22 rosetta_beta_6.06_x86_64-apple-darw 0x000000010778f0e6 protocols::jd2::BOINCJobDistributor::go(std::__1::shared_ptr<protocols::moves::Mover>) + 246 23 rosetta_beta_6.06_x86_64-apple-darw 0x0000000104cdd254 main + 22020 24 dyld 0x000000020d4f4781 start + 3457 ------------------------- End developer's backtrace -------------------------- [ ERROR ]: Caught exception: File: src/core/kinematics/Stub.cc:106 Error in Stub::from_four_points(): File: src/numeric/xyzVector.hh:654 Cannot create normalized xyzVector from vector of length() zero. Error occurred when trying to normalize the vector between points A and B. A=[-21000560746242452360565301968896.000000,-33961397413096902488014215708672.000000,51712407309809213927112675688448.000000], B=[-21000560746242452360565301968896.000000,-33961397413096902488014215708672.000000,51712407309809213927112675688448.000000]. ------------------------ Begin developer's backtrace ------------------------- BACKTRACE: 0 rosetta_beta_6.06_x86_64-apple-darw 0x00000001096bcec7 backtrace_string(int) + 87 1 rosetta_beta_6.06_x86_64-apple-darw 0x00000001096d0a1d utility::excn::Exception::Exception(char const*, int, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>> const&) + 205 2 rosetta_beta_6.06_x86_64-apple-darw 0x00000001092ad037 core::kinematics::Stub::from_four_points(numeric::xyzVector<double> const&, numeric::xyzVector<double> const&, numeric::xyzVector<double> const&, numeric::xyzVector<double> const&) + 2071 3 rosetta_beta_6.06_x86_64-apple-darw 0x0000000108bfc8cf core::scoring::lkball::LKB_ResidueInfo::build_waters(core::conformation::Residue const&, bool) + 895 4 rosetta_beta_6.06_x86_64-apple-darw 0x0000000108bfc1ae core::scoring::lkball::LKB_ResidueInfo::LKB_ResidueInfo(core::conformation::Residue const&, bool) + 270 5 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062aeb53 std::__1::shared_ptr<core::scoring::lkball::LKB_ResidueInfo> std::__1::shared_ptr<core::scoring::lkball::LKB_ResidueInfo>::make_shared<core::conformation::Residue const&>(core::conformation::Residue const&) + 83 6 rosetta_beta_6.06_x86_64-apple-darw 0x000000010629d7c9 protocols::ligand_docking::ga_ligand_dock::GridScorer::score(core::pose::Pose&, protocols::ligand_docking::ga_ligand_dock::LigandConformer const&, bool) + 777 7 rosetta_beta_6.06_x86_64-apple-darw 0x0000000107ab1642 core::optimization::ArmijoLineMinimization::Armijo(double, core::optimization::func_1d&) + 130 8 rosetta_beta_6.06_x86_64-apple-darw 0x0000000107ab135e core::optimization::ArmijoLineMinimization::operator()(utility::vector1<double, std::__1::allocator<double>>&, utility::vector1<double, std::__1::allocator<double>>&) + 494 9 rosetta_beta_6.06_x86_64-apple-darw 0x0000000107aba0b9 core::optimization::Minimizer::lbfgs(utility::vector1<double, std::__1::allocator<double>>&, double&, core::optimization::ConvergenceTest&, std::__1::shared_ptr<core::optimization::LineMinimizationAlgorithm>, int, bool) const + 3177 10 rosetta_beta_6.06_x86_64-apple-darw 0x0000000107ab502f core::optimization::Minimizer::run(utility::vector1<double, std::__1::allocator<double>>&) + 6975 11 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062ac52c protocols::ligand_docking::ga_ligand_dock::GridScorer::minimizer_loop(protocols::ligand_docking::ga_ligand_dock::LigandConformer&, core::optimization::MinimizerOptions const&) + 1884 12 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062a9770 protocols::ligand_docking::ga_ligand_dock::GridScorer::optimize(protocols::ligand_docking::ga_ligand_dock::LigandConformer&, utility::vector1<double, std::__1::allocator<double>>, utility::vector1<utility::vector1<protocols::ligand_docking::ga_ligand_dock::PlaceableRotamer, std::__1::allocator<protocols::ligand_docking::ga_ligand_dock::PlaceableRotamer>>, std::__1::allocator<utility::vector1<protocols::ligand_docking::ga_ligand_dock::PlaceableRotamer, std::__1::allocator<protocols::ligand_docking::ga_ligand_dock::PlaceableRotamer>>>>&, protocols::ligand_docking::ga_ligand_dock::RotamerPairEnergies&) + 752 13 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062b64b4 protocols::ligand_docking::ga_ligand_dock::GAOptimizer::optimize_generation(utility::vector1<protocols::ligand_docking::ga_ligand_dock::LigandConformer, std::__1::allocator<protocols::ligand_docking::ga_ligand_dock::LigandConformer>>&, utility::vector1<double, std::__1::allocator<double>> const&) + 356 14 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062afe52 protocols::ligand_docking::ga_ligand_dock::GAOptimizer::run(utility::vector1<protocols::ligand_docking::ga_ligand_dock::LigandConformer, std::__1::allocator<protocols::ligand_docking::ga_ligand_dock::LigandConformer>>&) + 2850 15 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062d447b protocols::ligand_docking::ga_ligand_dock::GALigandDock::run_docking(protocols::ligand_docking::ga_ligand_dock::LigandConformer const&, std::__1::shared_ptr<protocols::ligand_docking::ga_ligand_dock::GridScorer>, protocols::ligand_docking::ga_ligand_dock::LigandAligner&, protocols::ligand_docking::ga_ligand_dock::OutputStructureStore&) + 715 16 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062ca32e protocols::ligand_docking::ga_ligand_dock::GALigandDock::apply(core::pose::Pose&) + 14846 17 rosetta_beta_6.06_x86_64-apple-darw 0x00000001078bbfd8 protocols::rosetta_scripts::ParsedProtocol::apply_mover(core::pose::Pose&, protocols::rosetta_scripts::ParsedProtocol::ParsedProtocolStep const&) + 1224 18 rosetta_beta_6.06_x86_64-apple-darw 0x00000001078b462f protocols::rosetta_scripts::ParsedProtocol::apply(core::pose::Pose&) + 1935 19 rosetta_beta_6.06_x86_64-apple-darw 0x00000001077a122c protocols::jd2::JobDistributor::run_one_job(std::__1::shared_ptr<protocols::moves::Mover>&, long, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>&, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>&, unsigned long&, unsigned long&, bool) + 8204 20 rosetta_beta_6.06_x86_64-apple-darw 0x000000010779e572 protocols::jd2::JobDistributor::go_main(std::__1::shared_ptr<protocols::moves::Mover>) + 194 21 rosetta_beta_6.06_x86_64-apple-darw 0x0000000107799612 protocols::jd2::FileSystemJobDistributor::go(std::__1::shared_ptr<protocols::moves::Mover>) + 66 22 rosetta_beta_6.06_x86_64-apple-darw 0x000000010778f0e6 protocols::jd2::BOINCJobDistributor::go(std::__1::shared_ptr<protocols::moves::Mover>) + 246 23 rosetta_beta_6.06_x86_64-apple-darw 0x0000000104cdd254 main + 22020 24 dyld 0x000000020d4f4781 start + 3457 ------------------------- End developer's backtrace -------------------------- [ ERROR ]: Caught exception: File: src/core/kinematics/Stub.cc:106 Error in Stub::from_four_points(): File: src/numeric/xyzVector.hh:654 Cannot create normalized xyzVector from vector of length() zero. Error occurred when trying to normalize the vector between points A and B. A=[36992901902545497404829423632384.000000,-13521651982653384267873074020352.000000,-22660495375146681435591985332224.000000], B=[36992901902545497404829423632384.000000,-13521651982653384267873074020352.000000,-22660495375146681435591985332224.000000]. ------------------------ Begin developer's backtrace ------------------------- BACKTRACE: 0 rosetta_beta_6.06_x86_64-apple-darw 0x00000001096bcec7 backtrace_string(int) + 87 1 rosetta_beta_6.06_x86_64-apple-darw 0x00000001096d0a1d utility::excn::Exception::Exception(char const*, int, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>> const&) + 205 2 rosetta_beta_6.06_x86_64-apple-darw 0x00000001092ad037 core::kinematics::Stub::from_four_points(numeric::xyzVector<double> const&, numeric::xyzVector<double> const&, numeric::xyzVector<double> const&, numeric::xyzVector<double> const&) + 2071 3 rosetta_beta_6.06_x86_64-apple-darw 0x0000000108bfc8cf core::scoring::lkball::LKB_ResidueInfo::build_waters(core::conformation::Residue const&, bool) + 895 4 rosetta_beta_6.06_x86_64-apple-darw 0x0000000108bfc1ae core::scoring::lkball::LKB_ResidueInfo::LKB_ResidueInfo(core::conformation::Residue const&, bool) + 270 5 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062aeb53 std::__1::shared_ptr<core::scoring::lkball::LKB_ResidueInfo> std::__1::shared_ptr<core::scoring::lkball::LKB_ResidueInfo>::make_shared<core::conformation::Residue const&>(core::conformation::Residue const&) + 83 6 rosetta_beta_6.06_x86_64-apple-darw 0x000000010629d7c9 protocols::ligand_docking::ga_ligand_dock::GridScorer::score(core::pose::Pose&, protocols::ligand_docking::ga_ligand_dock::LigandConformer const&, bool) + 777 7 rosetta_beta_6.06_x86_64-apple-darw 0x0000000107ab1642 core::optimization::ArmijoLineMinimization::Armijo(double, core::optimization::func_1d&) + 130 8 rosetta_beta_6.06_x86_64-apple-darw 0x0000000107ab135e core::optimization::ArmijoLineMinimization::operator()(utility::vector1<double, std::__1::allocator<double>>&, utility::vector1<double, std::__1::allocator<double>>&) + 494 9 rosetta_beta_6.06_x86_64-apple-darw 0x0000000107aba0b9 core::optimization::Minimizer::lbfgs(utility::vector1<double, std::__1::allocator<double>>&, double&, core::optimization::ConvergenceTest&, std::__1::shared_ptr<core::optimization::LineMinimizationAlgorithm>, int, bool) const + 3177 10 rosetta_beta_6.06_x86_64-apple-darw 0x0000000107ab502f core::optimization::Minimizer::run(utility::vector1<double, std::__1::allocator<double>>&) + 6975 11 rosetta_beta_6.06_x86_64-apple-darw 0x000000010627c44c protocols::ligand_docking::ga_ligand_dock::LigandAligner::apply(protocols::ligand_docking::ga_ligand_dock::LigandConformer&) + 5308 12 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062dbc1f protocols::ligand_docking::ga_ligand_dock::GALigandDock::generate_perturbed_structures(protocols::ligand_docking::ga_ligand_dock::LigandConformer const&, std::__1::shared_ptr<protocols::ligand_docking::ga_ligand_dock::GridScorer>, unsigned long, protocols::ligand_docking::ga_ligand_dock::LigandAligner) const + 4799 13 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062d4315 protocols::ligand_docking::ga_ligand_dock::GALigandDock::run_docking(protocols::ligand_docking::ga_ligand_dock::LigandConformer const&, std::__1::shared_ptr<protocols::ligand_docking::ga_ligand_dock::GridScorer>, protocols::ligand_docking::ga_ligand_dock::LigandAligner&, protocols::ligand_docking::ga_ligand_dock::OutputStructureStore&) + 357 14 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062ca32e protocols::ligand_docking::ga_ligand_dock::GALigandDock::apply(core::pose::Pose&) + 14846 15 rosetta_beta_6.06_x86_64-apple-darw 0x00000001078bbfd8 protocols::rosetta_scripts::ParsedProtocol::apply_mover(core::pose::Pose&, protocols::rosetta_scripts::ParsedProtocol::ParsedProtocolStep const&) + 1224 16 rosetta_beta_6.06_x86_64-apple-darw 0x00000001078b462f protocols::rosetta_scripts::ParsedProtocol::apply(core::pose::Pose&) + 1935 17 rosetta_beta_6.06_x86_64-apple-darw 0x00000001077a122c protocols::jd2::JobDistributor::run_one_job(std::__1::shared_ptr<protocols::moves::Mover>&, long, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>&, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>&, unsigned long&, unsigned long&, bool) + 8204 18 rosetta_beta_6.06_x86_64-apple-darw 0x000000010779e572 protocols::jd2::JobDistributor::go_main(std::__1::shared_ptr<protocols::moves::Mover>) + 194 19 rosetta_beta_6.06_x86_64-apple-darw 0x0000000107799612 protocols::jd2::FileSystemJobDistributor::go(std::__1::shared_ptr<protocols::moves::Mover>) + 66 20 rosetta_beta_6.06_x86_64-apple-darw 0x000000010778f0e6 protocols::jd2::BOINCJobDistributor::go(std::__1::shared_ptr<protocols::moves::Mover>) + 246 21 rosetta_beta_6.06_x86_64-apple-darw 0x0000000104cdd254 main + 22020 22 dyld 0x000000020d4f4781 start + 3457 ------------------------- End developer's backtrace -------------------------- [ ERROR ]: Caught exception: File: src/core/kinematics/Stub.cc:106 Error in Stub::from_four_points(): File: src/numeric/xyzVector.hh:654 Cannot create normalized xyzVector from vector of length() zero. Error occurred when trying to normalize the vector between points A and B. A=[-96165228424801914834818403663872.000000,13090793708413956648271137996800.000000,65021112662586761624718449573888.000000], B=[-96165228424801914834818403663872.000000,13090793708413956648271137996800.000000,65021112662586761624718449573888.000000]. ------------------------ Begin developer's backtrace ------------------------- BACKTRACE: 0 rosetta_beta_6.06_x86_64-apple-darw 0x00000001096bcec7 backtrace_string(int) + 87 1 rosetta_beta_6.06_x86_64-apple-darw 0x00000001096d0a1d utility::excn::Exception::Exception(char const*, int, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>> const&) + 205 2 rosetta_beta_6.06_x86_64-apple-darw 0x00000001092ad037 core::kinematics::Stub::from_four_points(numeric::xyzVector<double> const&, numeric::xyzVector<double> const&, numeric::xyzVector<double> const&, numeric::xyzVector<double> const&) + 2071 3 rosetta_beta_6.06_x86_64-apple-darw 0x0000000108bfc8cf core::scoring::lkball::LKB_ResidueInfo::build_waters(core::conformation::Residue const&, bool) + 895 4 rosetta_beta_6.06_x86_64-apple-darw 0x0000000108bfc1ae core::scoring::lkball::LKB_ResidueInfo::LKB_ResidueInfo(core::conformation::Residue const&, bool) + 270 5 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062aeb53 std::__1::shared_ptr<core::scoring::lkball::LKB_ResidueInfo> std::__1::shared_ptr<core::scoring::lkball::LKB_ResidueInfo>::make_shared<core::conformation::Residue const&>(core::conformation::Residue const&) + 83 6 rosetta_beta_6.06_x86_64-apple-darw 0x000000010629d7c9 protocols::ligand_docking::ga_ligand_dock::GridScorer::score(core::pose::Pose&, protocols::ligand_docking::ga_ligand_dock::LigandConformer const&, bool) + 777 7 rosetta_beta_6.06_x86_64-apple-darw 0x0000000107ab1642 core::optimization::ArmijoLineMinimization::Armijo(double, core::optimization::func_1d&) + 130 8 rosetta_beta_6.06_x86_64-apple-darw 0x0000000107ab135e core::optimization::ArmijoLineMinimization::operator()(utility::vector1<double, std::__1::allocator<double>>&, utility::vector1<double, std::__1::allocator<double>>&) + 494 9 rosetta_beta_6.06_x86_64-apple-darw 0x0000000107aba0b9 core::optimization::Minimizer::lbfgs(utility::vector1<double, std::__1::allocator<double>>&, double&, core::optimization::ConvergenceTest&, std::__1::shared_ptr<core::optimization::LineMinimizationAlgorithm>, int, bool) const + 3177 10 rosetta_beta_6.06_x86_64-apple-darw 0x0000000107ab502f core::optimization::Minimizer::run(utility::vector1<double, std::__1::allocator<double>>&) + 6975 11 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062ac52c protocols::ligand_docking::ga_ligand_dock::GridScorer::minimizer_loop(protocols::ligand_docking::ga_ligand_dock::LigandConformer&, core::optimization::MinimizerOptions const&) + 1884 12 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062a9770 protocols::ligand_docking::ga_ligand_dock::GridScorer::optimize(protocols::ligand_docking::ga_ligand_dock::LigandConformer&, utility::vector1<double, std::__1::allocator<double>>, utility::vector1<utility::vector1<protocols::ligand_docking::ga_ligand_dock::PlaceableRotamer, std::__1::allocator<protocols::ligand_docking::ga_ligand_dock::PlaceableRotamer>>, std::__1::allocator<utility::vector1<protocols::ligand_docking::ga_ligand_dock::PlaceableRotamer, std::__1::allocator<protocols::ligand_docking::ga_ligand_dock::PlaceableRotamer>>>>&, protocols::ligand_docking::ga_ligand_dock::RotamerPairEnergies&) + 752 13 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062b64b4 protocols::ligand_docking::ga_ligand_dock::GAOptimizer::optimize_generation(utility::vector1<protocols::ligand_docking::ga_ligand_dock::LigandConformer, std::__1::allocator<protocols::ligand_docking::ga_ligand_dock::LigandConformer>>&, utility::vector1<double, std::__1::allocator<double>> const&) + 356 14 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062afe52 protocols::ligand_docking::ga_ligand_dock::GAOptimizer::run(utility::vector1<protocols::ligand_docking::ga_ligand_dock::LigandConformer, std::__1::allocator<protocols::ligand_docking::ga_ligand_dock::LigandConformer>>&) + 2850 15 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062d447b protocols::ligand_docking::ga_ligand_dock::GALigandDock::run_docking(protocols::ligand_docking::ga_ligand_dock::LigandConformer const&, std::__1::shared_ptr<protocols::ligand_docking::ga_ligand_dock::GridScorer>, protocols::ligand_docking::ga_ligand_dock::LigandAligner&, protocols::ligand_docking::ga_ligand_dock::OutputStructureStore&) + 715 16 rosetta_beta_6.06_x86_64-apple-darw 0x00000001062ca32e protocols::ligand_docking::ga_ligand_dock::GALigandDock::apply(core::pose::Pose&) + 14846 17 rosetta_beta_6.06_x86_64-apple-darw 0x00000001078bbfd8 protocols::rosetta_scripts::ParsedProtocol::apply_mover(core::pose::Pose&, protocols::rosetta_scripts::ParsedProtocol::ParsedProtocolStep const&) + 1224 18 rosetta_beta_6.06_x86_64-apple-darw 0x00000001078b462f protocols::rosetta_scripts::ParsedProtocol::apply(core::pose::Pose&) + 1935 19 rosetta_beta_6.06_x86_64-apple-darw 0x00000001077a122c protocols::jd2::JobDistributor::run_one_job(std::__1::shared_ptr<protocols::moves::Mover>&, long, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>&, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>&, unsigned long&, unsigned long&, bool) + 8204 20 rosetta_beta_6.06_x86_64-apple-darw 0x000000010779e572 protocols::jd2::JobDistributor::go_main(std::__1::shared_ptr<protocols::moves::Mover>) + 194 21 rosetta_beta_6.06_x86_64-apple-darw 0x0000000107799612 protocols::jd2::FileSystemJobDistributor::go(std::__1::shared_ptr<protocols::moves::Mover>) + 66 22 rosetta_beta_6.06_x86_64-apple-darw 0x000000010778f0e6 protocols::jd2::BOINCJobDistributor::go(std::__1::shared_ptr<protocols::moves::Mover>) + 246 23 rosetta_beta_6.06_x86_64-apple-darw 0x0000000104cdd254 main + 22020 24 dyld 0x000000020d4f4781 start + 3457 ------------------------- End developer's backtrace -------------------------- ====================================================== DONE :: 24 starting structures 28323.1 cpu seconds This process generated 24 decoys from 24 attempts ====================================================== BOINC :: WS_max 2.41035e+09 BOINC :: Watchdog shutting down... 01:31:18 (31554): called boinc_finish(0) </stderr_txt> ]]>
©2025 University of Washington
https://www.bakerlab.org