Task 1624807929

Name RosettaVS_SAVE_ALL_OUT_NOJRAN_M2_real_specificity_fulldb_IGNORE_THE_REST_BwiIOn_3_5641_3022817_2_1
Workunit 1445352815
Created 16 Dec 2025, 5:18:46 UTC
Sent 16 Dec 2025, 5:18:49 UTC
Report deadline 19 Dec 2025, 5:18:49 UTC
Received 17 Dec 2025, 17:13:11 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 6204943
Run time 1 days 10 hours 52 min 59 sec
CPU time 1 days 10 hours 50 min 44 sec
Validate state Valid
Credit 1,675.98
Device peak FLOPS 5.16 GFLOPS
Application version Rosetta Beta v6.06
x86_64-pc-linux-gnu
Peak working set size 1,171.91 MB
Peak swap size 1,318.24 MB
Peak disk usage 26.99 MB

Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
command: ../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu @M2_real_specificity_fulldb_BwiIOn_3_5641.flags -nstruct 10000 -cpu_run_time 28800 -boinc:max_nstruct 20000 -checkpoint_interval 120 -mute all -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -boinc::cpu_run_timeout 36000 -run::rng mt19937
Using database: database_f5ae1de8e1/database
Starting watchdog...
Watchdog active.

[ ERROR ]: Caught exception:


File: src/core/kinematics/Stub.cc:106
Error in Stub::from_four_points(): 

File: src/numeric/xyzVector.hh:654
Cannot create normalized xyzVector from vector of length() zero.  Error occurred when trying to normalize the vector between points A and B.  A=[1715850349741406643608879104.000000,-2221821894265830492512190464.000000,-2712482964856785703909982208.000000], B=[1715850349741406643608879104.000000,-2221821894265830492512190464.000000,-2712482964856785703909982208.000000].
 ------------------------ Begin developer's backtrace ------------------------- 
BACKTRACE:
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x85813e4) [0x55903e7613e4]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x8599fb4) [0x55903e779fb4]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0xc050e1) [0x559036de50e1]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x762802f) [0x55903d80802f]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x7639cbf) [0x55903d819cbf]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x32941fe) [0x5590394741fe]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x6232f32) [0x55903c412f32]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x5ae370e) [0x55903bcc370e]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x5ae9c95) [0x55903bcc9c95]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x3260853) [0x559039440853]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x317c2e4) [0x55903935c2e4]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x31895bc) [0x5590393695bc]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x318f35c) [0x55903936f35c]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x57d84d1) [0x55903b9b84d1]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x57d8bae) [0x55903b9b8bae]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x57d911e) [0x55903b9b911e]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x57da356) [0x55903b9ba356]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x5539fda) [0x55903b719fda]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x553b4fe) [0x55903b71b4fe]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x5853b97) [0x55903ba33b97]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x585255a) [0x55903ba3255a]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0xce0773) [0x559036ec0773]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90) [0x7f6db4f36d90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80) [0x7f6db4f36e40]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0xf22fca) [0x559037102fca]
 ------------------------- End developer's backtrace -------------------------- 
======================================================
DONE ::    26 starting structures   125445 cpu seconds
This process generated     26 decoys from      26 attempts
======================================================
BOINC :: WS_max 1.22884e+09

BOINC :: Watchdog shutting down...
11:13:11 (425463): called boinc_finish(0)

</stderr_txt>
]]>




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