Task 1624805990

Name	RosettaVS_SAVE_ALL_OUT_NOJRAN_M2_real_specificity_fulldb_IGNORE_THE_REST_BwiIOn_8_1015_3022822_1_1
Workunit	1445334008
Created	16 Dec 2025, 2:25:03 UTC
Sent	16 Dec 2025, 2:25:05 UTC
Report deadline	19 Dec 2025, 2:25:05 UTC
Received	17 Dec 2025, 0:22:51 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	6314432
Run time	4 hours 1 min 7 sec
CPU time	4 hours 0 min 58 sec
Validate state	Valid
Credit	245.95
Device peak FLOPS	3.27 GFLOPS
Application version	Rosetta Beta v6.06 x86_64-pc-linux-gnu
Peak working set size	1,162.19 MB
Peak swap size	1,314.26 MB
Peak disk usage	25.00 MB
Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
command: ../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu @M2_real_specificity_fulldb_BwiIOn_8_1015.flags -nstruct 10000 -cpu_run_time 28800 -boinc:max_nstruct 20000 -checkpoint_interval 120 -mute all -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -boinc::cpu_run_timeout 36000 -run::rng mt19937
Using database: database_f5ae1de8e1/database
Starting watchdog...
Watchdog active.
Starting watchdog...
Watchdog active.

[ ERROR ]: Caught exception:


File: src/core/kinematics/Stub.cc:106
Error in Stub::from_four_points(): 

File: src/numeric/xyzVector.hh:654
Cannot create normalized xyzVector from vector of length() zero.  Error occurred when trying to normalize the vector between points A and B.  A=[155995499550379343872.000000,1935336522130918211584.000000,-503622829818114473984.000000], B=[155995499550379343872.000000,1935336522130918211584.000000,-503622829818114473984.000000].
 ------------------------ Begin developer's backtrace ------------------------- 
BACKTRACE:
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x85813e4) [0x5d27f59223e4]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x8599fb4) [0x5d27f593afb4]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0xc050e1) [0x5d27edfa60e1]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x762802f) [0x5d27f49c902f]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x7639cbf) [0x5d27f49dacbf]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x32941fe) [0x5d27f06351fe]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x6232f32) [0x5d27f35d3f32]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x5ae370e) [0x5d27f2e8470e]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x5ae9c95) [0x5d27f2e8ac95]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x3260853) [0x5d27f0601853]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x317c2e4) [0x5d27f051d2e4]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x31895bc) [0x5d27f052a5bc]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x318f35c) [0x5d27f053035c]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x57d84d1) [0x5d27f2b794d1]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x57d8bae) [0x5d27f2b79bae]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x57d911e) [0x5d27f2b7a11e]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x57da356) [0x5d27f2b7b356]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x5539fda) [0x5d27f28dafda]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x553b4fe) [0x5d27f28dc4fe]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x5853b97) [0x5d27f2bf4b97]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x585255a) [0x5d27f2bf355a]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0xce0773) [0x5d27ee081773]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90) [0x7e6b58c29d90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80) [0x7e6b58c29e40]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0xf22fca) [0x5d27ee2c3fca]
 ------------------------- End developer's backtrace -------------------------- 

[ ERROR ]: Caught exception:


File: src/core/kinematics/Stub.cc:106
Error in Stub::from_four_points(): 

File: src/numeric/xyzVector.hh:654
Cannot create normalized xyzVector from vector of length() zero.  Error occurred when trying to normalize the vector between points A and B.  A=[-577635639183604224.000000,93444017539536864.000000,536422030393273664.000000], B=[-577635639183604224.000000,93444017539536864.000000,536422030393273664.000000].
 ------------------------ Begin developer's backtrace ------------------------- 
BACKTRACE:
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x85813e4) [0x5d27f59223e4]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x8599fb4) [0x5d27f593afb4]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0xc050e1) [0x5d27edfa60e1]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x762802f) [0x5d27f49c902f]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x7639cbf) [0x5d27f49dacbf]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x32941fe) [0x5d27f06351fe]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x6232f32) [0x5d27f35d3f32]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x5ae370e) [0x5d27f2e8470e]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x5ae9c95) [0x5d27f2e8ac95]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x3260853) [0x5d27f0601853]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x317c2e4) [0x5d27f051d2e4]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x31895bc) [0x5d27f052a5bc]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x318f35c) [0x5d27f053035c]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x57d84d1) [0x5d27f2b794d1]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x57d8bae) [0x5d27f2b79bae]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x57d911e) [0x5d27f2b7a11e]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x57da356) [0x5d27f2b7b356]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x5539fda) [0x5d27f28dafda]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x553b4fe) [0x5d27f28dc4fe]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x5853b97) [0x5d27f2bf4b97]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x585255a) [0x5d27f2bf355a]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0xce0773) [0x5d27ee081773]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90) [0x7e6b58c29d90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80) [0x7e6b58c29e40]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0xf22fca) [0x5d27ee2c3fca]
 ------------------------- End developer's backtrace -------------------------- 
======================================================
DONE ::     6 starting structures    14459 cpu seconds
This process generated      6 decoys from       6 attempts
======================================================
BOINC :: WS_max 1.21865e+09

BOINC :: Watchdog shutting down...
18:22:39 (483870): called boinc_finish(0)

</stderr_txt>
]]>