Task 1593778112
| Name | rb_01_15_654179_647453_ab_t000__robetta_cstwt_5.0_FT_IGNORE_THE_REST_06_06_3010553_263_0 |
| Workunit | 1417834335 |
| Created | 15 Jan 2025, 17:04:00 UTC |
| Sent | 15 Jan 2025, 17:34:13 UTC |
| Report deadline | 18 Jan 2025, 17:34:13 UTC |
| Received | 17 Jan 2025, 21:22:24 UTC |
| Server state | Over |
| Outcome | Computation error |
| Client state | Aborted by user |
| Exit status | 203 (0x000000CB) EXIT_ABORTED_VIA_GUI |
| Computer ID | 6314721 |
| Run time | 10 min |
| CPU time | 3 min 17 sec |
| Validate state | Invalid |
| Credit | 0.00 |
| Device peak FLOPS | 1.00 GFLOPS |
| Application version | Rosetta v4.20 windows_x86_64 |
| Peak working set size | 236.23 MB |
| Peak swap size | 218.68 MB |
| Peak disk usage | 157.43 MB |
Stderr output
<core_client_version>8.0.2</core_client_version>
<![CDATA[
<message>
aborted by user</message>
<stderr_txt>
command: projects/boinc.bakerlab.org_rosetta/rosetta_4.20_windows_x86_64.exe @rb_01_15_654179_647453_ab_t000__robetta_FLAGS -in::file::fasta t000_.fasta -jumps:pairing_file t000_.fasta.bbcontacts.jumps -jumps:random_sheets 3 3 3 7 3 1 2 1 2 2 1 2 2 1 2 2 1 2 1 1 1 -constraints::cst_file t000_.fasta.CB.cst -constraints:cst_weight 5.0 -constraints::cst_fa_file t000_.fasta.MIN.cst -constraints:cst_fa_weight 5.0 -in:file:boinc_wu_zip rb_01_15_654179_647453_ab_t000__robetta.zip -frag3 rb_01_15_654179_647453_ab_t000__robetta.200.3mers.index.gz -fragA rb_01_15_654179_647453_ab_t000__robetta.200.6mers.index.gz -fragB rb_01_15_654179_647453_ab_t000__robetta.200.6mers.index.gz -nstruct 10000 -cpu_run_time 28800 -boinc:max_nstruct 20000 -checkpoint_interval 120 -mute all -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -boinc::cpu_run_timeout 36000 -run::rng mt19937 -constant_seed -jran 2332182
Extracting in project directory: database_357d5d93529_n_methyl.zip
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_357d5d93529_n_methyl/minirosetta_database/sampling/filtered.vall.dat.2006-05-05.gz
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_357d5d93529_n_methyl/minirosetta_database/sampling/filtered.vall.dat.2006-05-05_longxing.gz
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_357d5d93529_n_methyl/minirosetta_database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/ketoses/hexoses/tagatoses/to1-beta-L-Tagp.params
Permission denied
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_357d5d93529_n_methyl/minirosetta_database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/ketoses/hexoses/fructoses/to4-alpha-D-Fruf.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_357d5d93529_n_methyl/minirosetta_database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/ketoses/hexoses/fructoses/to4-beta-D-Frup.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_357d5d93529_n_methyl/minirosetta_database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/ketoses/tetroses/erythruloses/.dummy
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_357d5d93529_n_methyl/minirosetta_database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/glucoses/to3-alpha-D-Quip.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_357d5d93529_n_methyl/minirosetta_database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/glucoses/to4-alpha-D-Olip.params
Permission denied
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
Extracting in slot directory: minirosetta_database.zip
Using database: minirosetta_database\
Unhandled Exception Detected...
- Unhandled Exception Record -
Reason: Breakpoint Encountered (0x80000003) at address 0x00007FFB3C4717F2
Engaging BOINC Windows Runtime Debugger...
********************
BOINC Windows Runtime Debugger Version 7.9.0
Dump Timestamp : 01/17/25 21:14:21
Install Directory : C:\Program Files\BOINC\
Data Directory : C:\ProgramData\BOINC
Project Symstore :
LoadLibraryA( C:\ProgramData\BOINC\dbghelp.dll ): GetLastError = 126
Loaded Library : dbghelp.dll
LoadLibraryA( C:\ProgramData\BOINC\symsrv.dll ): GetLastError = 126
LoadLibraryA( symsrv.dll ): GetLastError = 126
LoadLibraryA( C:\ProgramData\BOINC\srcsrv.dll ): GetLastError = 126
LoadLibraryA( srcsrv.dll ): GetLastError = 126
LoadLibraryA( C:\ProgramData\BOINC\version.dll ): GetLastError = 126
Loaded Library : version.dll
Debugger Engine : 4.0.5.0
Symbol Search Path: C:\ProgramData\BOINC\slots\14;C:\ProgramData\BOINC\projects\boinc.bakerlab.org_rosetta
ModLoad: 000000009b670000 00000000057ef000 C:\ProgramData\BOINC\projects\boinc.bakerlab.org_rosetta\rosetta_4.20_windows_x86_64.exe (-exported- Symbols Loaded)
Linked PDB Filename : C:\cygwin64\home\boinc\4.17\Rosetta\main\source\ide\VisualStudio\x64\BoincRelease\rosetta_4.20_windows_x86_64.pdb
ModLoad: 000000003ea00000 0000000000263000 C:\WINDOWS\SYSTEM32\ntdll.dll (6.2.26100.2454) (-exported- Symbols Loaded)
Linked PDB Filename : ntdll.pdb
File Version : 10.0.26100.2454 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Betriebssystem Microsoft® Windows®
Product Version : 10.0.26100.2454
ModLoad: 000000003d130000 00000000000c8000 C:\WINDOWS\System32\KERNEL32.DLL (6.2.26100.2454) (-exported- Symbols Loaded)
Linked PDB Filename : kernel32.pdb
File Version : 10.0.26100.2454 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Betriebssystem Microsoft® Windows®
Product Version : 10.0.26100.2454
ModLoad: 000000003c350000 00000000003b2000 C:\WINDOWS\System32\KERNELBASE.dll (6.2.26100.2454) (-exported- Symbols Loaded)
Linked PDB Filename : kernelbase.pdb
File Version : 10.0.26100.2454 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Betriebssystem Microsoft® Windows®
Product Version : 10.0.26100.2454
ModLoad: 000000003d5a0000 0000000000074000 C:\WINDOWS\System32\WS2_32.dll (6.2.26100.1882) (-exported- Symbols Loaded)
Linked PDB Filename : ws2_32.pdb
File Version : 10.0.26100.2308 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Betriebssystem Microsoft® Windows®
Product Version : 10.0.26100.2308
ModLoad: 000000003d720000 0000000000116000 C:\WINDOWS\System32\RPCRT4.dll (6.2.26100.2894) (-exported- Symbols Loaded)
Linked PDB Filename : rpcrt4.pdb
File Version : 10.0.26100.2308 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Betriebssystem Microsoft® Windows®
Product Version : 10.0.26100.2308
ModLoad: 000000003e2b0000 00000000001c8000 C:\WINDOWS\System32\USER32.dll (6.2.26100.2454) (-exported- Symbols Loaded)
Linked PDB Filename : user32.pdb
File Version : 10.0.26100.2308 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Betriebssystem Microsoft® Windows®
Product Version : 10.0.26100.2308
ModLoad: 000000003c320000 0000000000027000 C:\WINDOWS\System32\win32u.dll (6.2.26100.2605) (-exported- Symbols Loaded)
Linked PDB Filename : win32u.pdb
File Version : 10.0.26100.2605 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.26100.2605
ModLoad: 000000003cd20000 000000000002a000 C:\WINDOWS\System32\GDI32.dll (6.2.26100.2033) (-exported- Symbols Loaded)
Linked PDB Filename : gdi32.pdb
File Version : 10.0.26100.2033 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.26100.2033
ModLoad: 000000003bdd0000 000000000012b000 C:\WINDOWS\System32\gdi32full.dll (6.2.26100.2454) (-exported- Symbols Loaded)
Linked PDB Filename : gdi32full.pdb
File Version : 10.0.26100.2454 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.26100.2454
ModLoad: 000000003bf00000 00000000000a3000 C:\WINDOWS\System32\msvcp_win.dll (6.2.26100.1882) (-exported- Symbols Loaded)
Linked PDB Filename : msvcp_win.pdb
File Version : 10.0.26100.1882 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.26100.1882
ModLoad: 000000003c710000 000000000014b000 C:\WINDOWS\System32\ucrtbase.dll (6.2.26100.1882) (-exported- Symbols Loaded)
Linked PDB Filename : ucrtbase.pdb
File Version : 10.0.26100.1882 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.26100.1882
ModLoad: 000000003dfd0000 00000000000b4000 C:\WINDOWS\System32\ADVAPI32.dll (6.2.26100.2033) (-exported- Symbols Loaded)
Linked PDB Filename : advapi32.pdb
File Version : 10.0.26100.2308 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Betriebssystem Microsoft® Windows®
Product Version : 10.0.26100.2308
ModLoad: 000000003c860000 00000000000a9000 C:\WINDOWS\System32\msvcrt.dll (7.0.26100.1882) (-exported- Symbols Loaded)
Linked PDB Filename : msvcrt.pdb
File Version : 7.0.26100.1882 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 7.0.26100.1882
ModLoad: 000000003d670000 00000000000a6000 C:\WINDOWS\System32\sechost.dll (6.2.26100.2454) (-exported- Symbols Loaded)
Linked PDB Filename : sechost.pdb
File Version : 10.0.26100.1 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.26100.1
ModLoad: 000000003cd50000 000000000002f000 C:\WINDOWS\System32\IMM32.DLL (6.2.26100.1150) (-exported- Symbols Loaded)
Linked PDB Filename : imm32.pdb
File Version : 10.0.26100.1150 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.26100.1150
ModLoad: 000000003abe0000 000000000001a000 C:\WINDOWS\SYSTEM32\kernel.appcore.dll (6.2.26100.1591) (-exported- Symbols Loaded)
Linked PDB Filename : Kernel.Appcore.pdb
File Version : 10.0.26100.1591 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.26100.1591
ModLoad: 000000003ad10000 0000000000035000 C:\WINDOWS\SYSTEM32\ntmarta.dll (6.2.26100.1150) (-exported- Symbols Loaded)
Linked PDB Filename : ntmarta.pdb
File Version : 10.0.26100.2308 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Betriebssystem Microsoft® Windows®
Product Version : 10.0.26100.2308
ModLoad: 0000000039530000 0000000000241000 C:\WINDOWS\SYSTEM32\dbghelp.dll (6.2.26100.2033) (-exported- Symbols Loaded)
Linked PDB Filename : dbghelp.pdb
File Version : 10.0.26100.2033 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.26100.2033
ModLoad: 000000003cda0000 000000000037e000 C:\WINDOWS\System32\combase.dll (6.2.26100.2894) (-exported- Symbols Loaded)
Linked PDB Filename : combase.pdb
File Version : 10.0.26100.2308 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Betriebssystem Microsoft® Windows®
Product Version : 10.0.26100.2308
ModLoad: 000000003e190000 00000000000d6000 C:\WINDOWS\System32\OLEAUT32.dll (6.2.26100.1882) (-exported- Symbols Loaded)
Linked PDB Filename : oleaut32.pdb
File Version : 10.0.26100.1882 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.26100.1882
ModLoad: 0000000034cc0000 000000000000b000 C:\WINDOWS\SYSTEM32\version.dll (6.2.26100.1150) (-exported- Symbols Loaded)
Linked PDB Filename : version.pdb
File Version : 10.0.26100.1150 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.26100.1150
ModLoad: 000000003c280000 0000000000099000 C:\WINDOWS\System32\bcryptPrimitives.dll (6.2.26100.2033) (-exported- Symbols Loaded)
Linked PDB Filename : bcryptprimitives.pdb
File Version : 10.0.26100.2033 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.26100.2033
*** Dump of the Process Statistics: ***
- I/O Operations Counters -
Read: 16520, Write: 196, Other 15345
- I/O Transfers Counters -
Read: 60799040, Write: 419161, Other 3546
- Paged Pool Usage -
QuotaPagedPoolUsage: 323472, QuotaPeakPagedPoolUsage: 323744
QuotaNonPagedPoolUsage: 10888, QuotaPeakNonPagedPoolUsage: 11024
- Virtual Memory Usage -
VirtualSize: 251736064, PeakVirtualSize: 1063481344
- Pagefile Usage -
PagefileUsage: 251736064, PeakPagefileUsage: 265154560
- Working Set Size -
WorkingSetSize: 270442496, PeakWorkingSetSize: 283533312, PageFaultCount: 116999
*** Dump of thread ID 10688 (state: Initialized): ***
- Information -
Status: Base Priority: Normal, Priority: Normal, , Kernel Time: 0.000000, User Time: 0.000000, Wait Time: 0.000000
- Unhandled Exception Record -
Reason: Breakpoint Encountered (0x80000003) at address 0x00007FFB3C4717F2
- Registers -
rax=0000000000000000 rbx=0000000000000001 rcx=000000009f208060 rdx=00000000aae3f5e0 rsi=0000000000000000 rdi=0000000000000000
r8=00000000aae3f5e0 r9=000000009f208050 r10=0000000000000001 r11=0000000000000fff r12=0000000000000000 r13=0000000000000000
r14=0000000000000000 r15=0000000000000000 rip=000000003c4717f2 rsp=00000000aae3f5b8 rbp=0000000000000000
cs=0033 ss=002b ds=002b es=002b fs=0053 gs=002b efl=00000246
- Callstack -
ChildEBP RetAddr Args to Child
aae3f5b0 9bb36f1e 00000001 aae3f5e0 aae3f5e0 9f208050 KERNELBASE!DebugBreak+0x0
aae3f9f0 9bb37f10 00000000 00000000 fff0bdc0 1df5ecfa rosetta_4.20_windows_x86_64!xmlParserInputRead+0x0
aae3fc50 3d15e8d7 00000000 00000000 00000000 00000000 rosetta_4.20_windows_x86_64!xmlParserInputRead+0x0
aae3fc80 3eadfbcc 00000000 00000000 fffffb30 fffffb30 KERNEL32!BaseThreadInitThunk+0x0
aae3fcd0 00000000 00000000 00000000 00000000 00000000 ntdll!RtlUserThreadStart+0x0
*** Dump of thread ID 31156508 (state: Initialized): ***
- Information -
Status: Base Priority: Normal, Priority: Unknown, , Kernel Time: 17179869184.000000, User Time: 21474836480.000000, Wait Time: 0.000000
- Registers -
rax=0000000000000000 rbx=0000000000000000 rcx=0000000000000000 rdx=0000000000000000 rsi=0000000000000000 rdi=0000000000000000
r8=0000000000000000 r9=0000000000000000 r10=0000000000000000 r11=0000000000000000 r12=0000000000000000 r13=0000000000000000
r14=0000000000000000 r15=0000000000000000 rip=0000000000000000 rsp=0000000000000000 rbp=0000000000000000
cs=0000 ss=0000 ds=0000 es=0000 fs=0000 gs=0000 efl=00000000
- Callstack -
ChildEBP RetAddr Args to Child
(-nosymbols- PC == 0)
00000000 00000000 00000000 00000000 00000000 00000000 !+0x0
*** Debug Message Dump ****
*** Foreground Window Data ***
Window Name :
Window Class :
Window Process ID: 0
Window Thread ID : 0
Exiting...
</stderr_txt>
]]>
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