Task 1593366250

Name rb_12_21_649830_643581_ab_t000__robetta_cstwt_5.0_FT_IGNORE_THE_REST_06_09_3010385_3_0
Workunit 1417514850
Created 22 Dec 2024, 7:33:07 UTC
Sent 22 Dec 2024, 7:33:15 UTC
Report deadline 25 Dec 2024, 7:33:15 UTC
Received 22 Dec 2024, 15:15:13 UTC
Server state Over
Outcome Computation error
Client state Compute error
Exit status 1 (0x00000001) Unknown error code
Computer ID 6309989
Run time 6 hours 51 min 37 sec
CPU time 6 hours 6 min 5 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 1.00 GFLOPS
Application version Rosetta v4.20
x86_64-apple-darwin
Peak working set size 2,162.38 MB
Peak swap size 65,104.32 MB
Peak disk usage 30.79 MB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<message>
process exited with code 1 (0x1, -255)</message>
<stderr_txt>
command: rosetta_4.20_x86_64-apple-darwin @rb_12_21_649830_643581_ab_t000__robetta_FLAGS -in::file::fasta t000_.fasta -jumps:pairing_file t000_.fasta.bbcontacts.jumps -jumps:random_sheets 3 3 -constraints::cst_file t000_.fasta.CB.cst -constraints:cst_weight 5.0 -constraints::cst_fa_file t000_.fasta.MIN.cst -constraints:cst_fa_weight 5.0 -in:file:boinc_wu_zip rb_12_21_649830_643581_ab_t000__robetta.zip -frag3 rb_12_21_649830_643581_ab_t000__robetta.200.3mers.index.gz -fragA rb_12_21_649830_643581_ab_t000__robetta.200.9mers.index.gz -fragB rb_12_21_649830_643581_ab_t000__robetta.200.6mers.index.gz -nstruct 10000 -cpu_run_time 28800 -boinc:max_nstruct 20000 -checkpoint_interval 120 -mute all -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -boinc::cpu_run_timeout 36000 -run::rng mt19937 -constant_seed -jran 2797614
Using database: database_357d5d93529_n_methyl/minirosetta_database

[ ERROR ]: Caught exception:


File: src/core/pack/dunbrack/SingleResidueDunbrackLibrary.hh:306
chi angle must be between -180 and 180: nan
 ------------------------ Begin developer's backtrace ------------------------- 
BACKTRACE:
0   rosetta_4.20_x86_64-apple-darwin    0x000000010813a630 Kernel::kernel_precomputed(int, int) const + 322720
1   rosetta_4.20_x86_64-apple-darwin    0x0000000108139eb1 Kernel::kernel_precomputed(int, int) const + 320801
2   rosetta_4.20_x86_64-apple-darwin    0x000000010672a751 core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 753137
3   rosetta_4.20_x86_64-apple-darwin    0x0000000106728b7b core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 746011
4   rosetta_4.20_x86_64-apple-darwin    0x00000001069056d6 core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 2698614
5   rosetta_4.20_x86_64-apple-darwin    0x00000001066f4f18 core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 533944
6   rosetta_4.20_x86_64-apple-darwin    0x0000000106f6e1e6 boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, core::pose::Pose, core::conformation::signals::XYZEvent const&>, boost::_bi::list2<boost::_bi::value<core::pose::Pose*>, boost::arg<1>>>, void, core::conformation::signals::XYZEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::XYZEvent) + 1754614
7   rosetta_4.20_x86_64-apple-darwin    0x000000010700bbc6 core::scoring::compare_by_abs(void const*, void const*) + 306326
8   rosetta_4.20_x86_64-apple-darwin    0x00000001070059aa core::scoring::compare_by_abs(void const*, void const*) + 281210
9   rosetta_4.20_x86_64-apple-darwin    0x000000010666ed53 boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::moves::PyMOLObserver, core::pose::signals::ConformationEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::moves::PyMOLObserver*>, boost::arg<1>>>, void, core::pose::signals::ConformationEvent>::invoke(boost::detail::function::function_buffer&, core::pose::signals::ConformationEvent) + 2466403
10  rosetta_4.20_x86_64-apple-darwin    0x00000001066774b7 core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 19287
11  rosetta_4.20_x86_64-apple-darwin    0x0000000106677121 core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 18369
12  rosetta_4.20_x86_64-apple-darwin    0x000000010667fc7e core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 54046
13  rosetta_4.20_x86_64-apple-darwin    0x000000010667a925 core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 32709
14  rosetta_4.20_x86_64-apple-darwin    0x000000010666c31e boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::moves::PyMOLObserver, core::pose::signals::ConformationEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::moves::PyMOLObserver*>, boost::arg<1>>>, void, core::pose::signals::ConformationEvent>::invoke(boost::detail::function::function_buffer&, core::pose::signals::ConformationEvent) + 2455598
15  rosetta_4.20_x86_64-apple-darwin    0x0000000105d82f14 boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1>>>, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 7259236
16  rosetta_4.20_x86_64-apple-darwin    0x0000000105d82ac2 boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1>>>, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 7258130
17  rosetta_4.20_x86_64-apple-darwin    0x0000000105d8319d boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1>>>, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 7259885
18  rosetta_4.20_x86_64-apple-darwin    0x0000000105945013 boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1>>>, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 2811235
19  rosetta_4.20_x86_64-apple-darwin    0x000000010594638b boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1>>>, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 2816219
20  rosetta_4.20_x86_64-apple-darwin    0x00000001059488ad boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1>>>, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 2825725
21  rosetta_4.20_x86_64-apple-darwin    0x000000010596f65f boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1>>>, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 2984879
22  rosetta_4.20_x86_64-apple-darwin    0x0000000104bbeea2 protocols::multistage_rosetta_scripts::cluster::complex_type_name_for_cluster_metric(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>> const&) + 3828914
23  rosetta_4.20_x86_64-apple-darwin    0x0000000104bcb226 protocols::multistage_rosetta_scripts::cluster::complex_type_name_for_cluster_metric(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>> const&) + 3878966
24  rosetta_4.20_x86_64-apple-darwin    0x0000000104bcda5f protocols::multistage_rosetta_scripts::cluster::complex_type_name_for_cluster_metric(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>> const&) + 3889263
25  rosetta_4.20_x86_64-apple-darwin    0x0000000104164128 rosetta_4.20_x86_64-apple-darwin + 24872
26  dyld                                0x000000020a4cf2cd start + 1805
 ------------------------- End developer's backtrace -------------------------- 

</stderr_txt>
]]>




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