Task 1593350383
| Name | rb_12_14_648840_642308__t000__0_C3_SAVE_ALL_OUT_IGNORE_THE_REST_3010345_309_1 |
| Workunit | 1417478508 |
| Created | 19 Dec 2024, 5:10:49 UTC |
| Sent | 19 Dec 2024, 5:10:52 UTC |
| Report deadline | 22 Dec 2024, 5:10:52 UTC |
| Received | 19 Dec 2024, 21:39:14 UTC |
| Server state | Over |
| Outcome | Computation error |
| Client state | Compute error |
| Exit status | -529697949 (0xE06D7363) Unknown error code |
| Computer ID | 6309721 |
| Run time | 13 hours 53 min 45 sec |
| CPU time | 7 hours 35 min 44 sec |
| Validate state | Invalid |
| Credit | 0.00 |
| Device peak FLOPS | 2.65 GFLOPS |
| Application version | Rosetta v4.20 windows_x86_64 |
| Peak working set size | 1,162.45 MB |
| Peak swap size | 2,642.37 MB |
| Peak disk usage | 989.73 MB |
Stderr output
<core_client_version>8.0.2</core_client_version>
<![CDATA[
<message>
(unknown error) (317) - exit code 3765269347 (0xe06d7363)</message>
<stderr_txt>
command: projects/boinc.bakerlab.org_rosetta/rosetta_4.20_windows_x86_64.exe -run:protocol jd2_scripting @flags_rb_12_14_648840_642308__t000__0_C3_robetta -silent_gz -mute all -out:file:silent default.out -in:file:boinc_wu_zip input_rb_12_14_648840_642308__t000__0_C3_robetta.zip -nstruct 10000 -cpu_run_time 28800 -boinc:max_nstruct 20000 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -boinc::cpu_run_timeout 36000 -run::rng mt19937 -constant_seed -jran 2835069
Extracting in project directory: database_357d5d93529_n_methyl.zip
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_357d5d93529_n_methyl/minirosetta_database/scoring/score_functions/mhc_epitope/iedb_data.db
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_357d5d93529_n_methyl/minirosetta_database/scoring/score_functions/rama/oligourea/OU3_PRO_rama_preproline.txt
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_357d5d93529_n_methyl/minirosetta_database/scoring/score_functions/rama/oligourea/OU3_ALA_rama_preproline.txt
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_357d5d93529_n_methyl/minirosetta_database/scoring/score_functions/rama/aramid/LAA_rama.txt
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_357d5d93529_n_methyl/minirosetta_database/scoring/score_functions/rama/aramid/RAA_rama.txt
Permission denied
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_357d5d93529_n_methyl/minirosetta_database/scoring/score_functions/P_AA_pp/shapovalov/2.5deg/kappa50/a20.prop
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_357d5d93529_n_methyl/minirosetta_database/scoring/score_functions/goap/angle_table.dat.gz
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_357d5d93529_n_methyl/minirosetta_database/scoring/score_functions/goap/dist_table.dat.gz
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_357d5d93529_n_methyl/minirosetta_database/scoring/motif/bounding_1-15__xs_bb_ss_AFILVWY_FILWY_resl0.5_smooth1.3_msc0.3_mbv1.0_HH.xh.bin.gz
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_357d5d93529_n_methyl/minirosetta_database/scoring/motif/bounding_1-15__xs_bb_ss_AFILVWY_FILWY_resl0.5_smooth1.3_msc0.3_mbv1.0_LH.xh.bin.gz
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_357d5d93529_n_methyl/minirosetta_database/scoring/motif/bounding_1-15__xs_bb_ss_AFILVWY_FILWY_resl0.5_smooth1.3_msc0.3_mbv1.0_EH.xh.bin.gz
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_357d5d93529_n_methyl/minirosetta_database/scoring/motif/bounding_1-15__xs_bb_ss_AFILVWY_FILWY_resl0.5_smooth1.3_msc0.3_mbv1.0_LE.xh.bin.gz
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_357d5d93529_n_methyl/minirosetta_database/scoring/dfire/dfire_pair.lib.txt
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_357d5d93529_n_methyl/minirosetta_database/sequence/mhc_rank_svm_scores/HLA-DRB10301.libsvm.test.out.sort.gz
Permission denied
CreateFile() error 32 when trying set file time
CreateFile() error 2 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_357d5d93529_n_methyl/minirosetta_database/sequence/mhc_rank_svm_scores/HLA-DRB10101.libsvm.test.out.sort.gz
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_357d5d93529_n_methyl/minirosetta_database/sequence/mhc_rank_svm_scores/HLA-DRB11101.libsvm.test.out.sort.gz
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_357d5d93529_n_methyl/minirosetta_database/sequence/mhc_rank_svm_scores/HLA-DRB10701.libsvm.test.out.sort.gz
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_357d5d93529_n_methyl/minirosetta_database/sequence/mhc_rank_svm_scores/HLA-DPA101-DPB10401.libsvm.test.out.sort.gz
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_357d5d93529_n_methyl/minirosetta_database/sequence/mhc_rank_svm_scores/HLA-DRB10405.libsvm.test.out.sort.gz
Permission denied
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_357d5d93529_n_methyl/minirosetta_database/sampling/filtered.vall.dat.2006-05-05.gz
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_357d5d93529_n_methyl/minirosetta_database/sampling/fragpicker_rama_tables/H_W.counts.gz
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_357d5d93529_n_methyl/minirosetta_database/sampling/filtered.vall.dat.2006-05-05_longxing.gz
Permission denied
Extracting in slot directory: minirosetta_database.zip
Using database: minirosetta_database\
Unhandled Exception Detected...
- Unhandled Exception Record -
Reason: Out Of Memory (C++ Exception) (0xe06d7363) at address 0x00007FF86991B699
Engaging BOINC Windows Runtime Debugger...
********************
BOINC Windows Runtime Debugger Version 7.9.0
Dump Timestamp : 12/19/24 22:28:40
Install Directory : C:\Program Files\BOINC\
Data Directory : C:\ProgramData\BOINC
Project Symstore : https://boinc.bakerlab.org/rosetta/symstore
LoadLibraryA( C:\ProgramData\BOINC\dbghelp.dll ): GetLastError = 126
Loaded Library : dbghelp.dll
LoadLibraryA( C:\ProgramData\BOINC\symsrv.dll ): GetLastError = 126
LoadLibraryA( symsrv.dll ): GetLastError = 126
LoadLibraryA( C:\ProgramData\BOINC\srcsrv.dll ): GetLastError = 126
LoadLibraryA( srcsrv.dll ): GetLastError = 126
LoadLibraryA( C:\ProgramData\BOINC\version.dll ): GetLastError = 126
Loaded Library : version.dll
Debugger Engine : 4.0.5.0
Symbol Search Path: C:\ProgramData\BOINC\slots\5;C:\ProgramData\BOINC\projects\boinc.bakerlab.org_rosetta;srv*C:\ProgramData\BOINC\projects\boinc.bakerlab.org_rosetta\symbols*http://msdl.microsoft.com/download/symbols;srv*C:\ProgramData\BOINC\projects\boinc.bakerlab.org_rosetta\symbols*https://boinc.bakerlab.org/rosetta/symstore
ModLoad: 00000000f1e80000 00000000057ef000 C:\ProgramData\BOINC\projects\boinc.bakerlab.org_rosetta\rosetta_4.20_windows_x86_64.exe (-exported- Symbols Loaded)
Linked PDB Filename : C:\cygwin64\home\boinc\4.17\Rosetta\main\source\ide\VisualStudio\x64\BoincRelease\rosetta_4.20_windows_x86_64.pdb
ModLoad: 000000006be90000 00000000001f8000 C:\Windows\SYSTEM32\ntdll.dll (6.2.19041.5007) (-exported- Symbols Loaded)
Linked PDB Filename : ntdll.pdb
File Version : 10.0.19041.4842 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Betriebssystem Microsoft® Windows®
Product Version : 10.0.19041.4842
ModLoad: 000000006aab0000 00000000000c2000 C:\Windows\System32\KERNEL32.DLL (6.2.19041.5198) (-exported- Symbols Loaded)
Linked PDB Filename : kernel32.pdb
File Version : 10.0.19041.5072 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Betriebssystem Microsoft® Windows®
Product Version : 10.0.19041.5072
ModLoad: 00000000698e0000 00000000002fe000 C:\Windows\System32\KERNELBASE.dll (6.2.19041.5198) (-exported- Symbols Loaded)
Linked PDB Filename : kernelbase.pdb
File Version : 10.0.19041.5072 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Betriebssystem Microsoft® Windows®
Product Version : 10.0.19041.5072
ModLoad: 000000006a2c0000 000000000006b000 C:\Windows\System32\WS2_32.dll (6.2.19041.3636) (-exported- Symbols Loaded)
Linked PDB Filename : ws2_32.pdb
File Version : 10.0.19041.4522 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Betriebssystem Microsoft® Windows®
Product Version : 10.0.19041.4522
ModLoad: 000000006a080000 0000000000123000 C:\Windows\System32\RPCRT4.dll (6.2.19041.4957) (-exported- Symbols Loaded)
Linked PDB Filename : rpcrt4.pdb
File Version : 10.0.19041.4522 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Betriebssystem Microsoft® Windows®
Product Version : 10.0.19041.4522
ModLoad: 000000006a330000 000000000019d000 C:\Windows\System32\USER32.dll (6.2.19041.4717) (-exported- Symbols Loaded)
Linked PDB Filename : user32.pdb
File Version : 10.0.19041.4522 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Betriebssystem Microsoft® Windows®
Product Version : 10.0.19041.4522
ModLoad: 0000000069530000 0000000000022000 C:\Windows\System32\win32u.dll (6.2.19041.5247) (-exported- Symbols Loaded)
Linked PDB Filename : win32u.pdb
File Version : 10.0.19041.5247 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.19041.5247
ModLoad: 000000006bcf0000 000000000002b000 C:\Windows\System32\GDI32.dll (6.2.19041.4474) (-exported- Symbols Loaded)
Linked PDB Filename : gdi32.pdb
File Version : 10.0.19041.4474 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.19041.4474
ModLoad: 00000000696c0000 0000000000117000 C:\Windows\System32\gdi32full.dll (6.2.19041.4957) (-exported- Symbols Loaded)
Linked PDB Filename : gdi32full.pdb
File Version : 10.0.19041.4957 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.19041.4957
ModLoad: 0000000069cd0000 000000000009d000 C:\Windows\System32\msvcp_win.dll (6.2.19041.3636) (-exported- Symbols Loaded)
Linked PDB Filename : msvcp_win.pdb
File Version : 10.0.19041.3636 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.19041.3636
ModLoad: 00000000697e0000 0000000000100000 C:\Windows\System32\ucrtbase.dll (6.2.19041.3636) (-exported- Symbols Loaded)
Linked PDB Filename : ucrtbase.pdb
File Version : 10.0.19041.3636 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.19041.3636
ModLoad: 000000006a530000 00000000000b1000 C:\Windows\System32\ADVAPI32.dll (6.2.19041.5072) (-exported- Symbols Loaded)
Linked PDB Filename : advapi32.pdb
File Version : 10.0.19041.4522 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Betriebssystem Microsoft® Windows®
Product Version : 10.0.19041.4522
ModLoad: 0000000069fe0000 000000000009e000 C:\Windows\System32\msvcrt.dll (7.0.19041.3636) (-exported- Symbols Loaded)
Linked PDB Filename : msvcrt.pdb
File Version : 7.0.19041.3636 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 7.0.19041.3636
ModLoad: 000000006bdb0000 000000000009f000 C:\Windows\System32\sechost.dll (6.2.19041.5072) (-exported- Symbols Loaded)
Linked PDB Filename : sechost.pdb
File Version : 10.0.19041.1 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.19041.1
ModLoad: 0000000069be0000 0000000000027000 C:\Windows\System32\bcrypt.dll (6.2.19041.3636) (-exported- Symbols Loaded)
Linked PDB Filename : bcrypt.pdb
File Version : 10.0.19041.4522 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Betriebssystem Microsoft® Windows®
Product Version : 10.0.19041.4522
ModLoad: 000000006a5f0000 000000000002f000 C:\Windows\System32\IMM32.DLL (6.2.19041.4474) (-exported- Symbols Loaded)
Linked PDB Filename : imm32.pdb
File Version : 10.0.19041.4474 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.19041.4474
ModLoad: 00000000673d0000 0000000000012000 C:\Windows\SYSTEM32\kernel.appcore.dll (6.2.19041.3758) (-exported- Symbols Loaded)
Linked PDB Filename : Kernel.Appcore.pdb
File Version : 10.0.19041.3758 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.19041.3758
ModLoad: 00000000687c0000 0000000000033000 C:\Windows\SYSTEM32\ntmarta.dll (6.2.19041.3636) (-exported- Symbols Loaded)
Linked PDB Filename : ntmarta.pdb
File Version : 10.0.19041.4522 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Betriebssystem Microsoft® Windows®
Product Version : 10.0.19041.4522
ModLoad: 0000000068e60000 000000000000c000 C:\Windows\SYSTEM32\CRYPTBASE.DLL (6.2.19041.3636) (-exported- Symbols Loaded)
Linked PDB Filename : cryptbase.pdb
File Version : 10.0.19041.3636 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.19041.3636
ModLoad: 0000000069e20000 0000000000082000 C:\Windows\System32\bcryptPrimitives.dll (6.2.19041.5007) (-exported- Symbols Loaded)
Linked PDB Filename : bcryptprimitives.pdb
File Version : 10.0.19041.5007 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.19041.5007
ModLoad: 000000005e970000 00000000001e4000 C:\Windows\SYSTEM32\dbghelp.dll (6.2.19041.3636) (-exported- Symbols Loaded)
Linked PDB Filename : dbghelp.pdb
File Version : 10.0.19041.3636 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.19041.3636
ModLoad: 0000000063440000 000000000000a000 C:\Windows\SYSTEM32\version.dll (6.2.19041.3636) (-exported- Symbols Loaded)
Linked PDB Filename : version.pdb
File Version : 10.0.19041.3636 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.19041.3636
*** Dump of the Process Statistics: ***
- I/O Operations Counters -
Read: 139939, Write: 40165, Other 541610
- I/O Transfers Counters -
Read: 959403658, Write: 1742176268, Other 593072
- Paged Pool Usage -
QuotaPagedPoolUsage: 319616, QuotaPeakPagedPoolUsage: 319792
QuotaNonPagedPoolUsage: 36848, QuotaPeakNonPagedPoolUsage: 42152
- Virtual Memory Usage -
VirtualSize: 1929396224, PeakVirtualSize: -915300352
- Pagefile Usage -
PagefileUsage: 1929396224, PeakPagefileUsage: -1524178944
- Working Set Size -
WorkingSetSize: 290942976, PeakWorkingSetSize: 1219579904, PageFaultCount: 39243358
*** Dump of thread ID 1772 (state: Initialized): ***
- Information -
Status: Base Priority: Normal, Priority: Normal, , Kernel Time: 0.000000, User Time: 0.000000, Wait Time: 0.000000
- Unhandled Exception Record -
Reason: Out Of Memory (C++ Exception) (0xe06d7363) at address 0x00007FF86991B699
- Registers -
rax=000000001dd57010 rbx=0000000068741f50 rcx=000000000000fb01 rdx=000000006beaead2 rsi=00000000687425b0 rdi=0000000068740ff0
r8=000000000000fb01 r9=0000000033e2fa68 r10=00000000fa00fb01 r11=0000000097cc6000 r12=00000000687402e0 r13=0000000000000000
r14=0000000068741608 r15=0000000000000000 rip=000000006991b699 rsp=00000000687401a0 rbp=0000000068740850
cs=0033 ss=002b ds=002b es=002b fs=0053 gs=002b efl=00000206
- Callstack -
ChildEBP RetAddr Args to Child
68740270 f2301f75 f559042a 68741608 00000100 336e2020 KERNELBASE!RaiseException+0x0
68740320 6bf31c26 00000000 687425b0 00000000 00000000 rosetta_4.20_windows_x86_64!xmlParserInputRead+0x0
68749780 f2d5a402 5971e4a0 ffffffff ffffffff 6ab25ce0 ntdll!RtlCaptureContext2+0x0
68749a40 f2d02dc0 f72f6ec0 5950b4f0 63ba7780 5950b4f0 rosetta_4.20_windows_x86_64!xmlCheckHTTPInput+0x0
68749fe0 f2d000f8 5950b4f0 5950b4f0 6874a0f0 6874a0d8 rosetta_4.20_windows_x86_64!xmlCheckHTTPInput+0x0
6874a1b0 f2d6a4d1 6874a238 5950b4f0 6874a238 6874a3c0 rosetta_4.20_windows_x86_64!xmlCheckHTTPInput+0x0
6874a200 f2d5006d 5933c0a0 6874a238 5933c0a0 58f57f00 rosetta_4.20_windows_x86_64!xmlCheckHTTPInput+0x0
6874a290 f2300dfd 5991f5a0 6874a3c0 00000000 58f57f00 rosetta_4.20_windows_x86_64!xmlCheckHTTPInput+0x0
6875fec0 f230b215 00000000 00000000 f722ccf8 00000000 rosetta_4.20_windows_x86_64!xmlParserInputRead+0x0
6875ff00 6aac7374 00000000 00000000 00000000 00000000 rosetta_4.20_windows_x86_64!xmlParserInputRead+0x0
6875ff30 6bedcc91 00000000 00000000 00000000 00000000 KERNEL32!BaseThreadInitThunk+0x0
6875ffb0 00000000 00000000 00000000 00000000 00000000 ntdll!RtlUserThreadStart+0x0
*** Dump of thread ID 32760 (state: Initialized): ***
- Information -
Status: Base Priority: Normal, Priority: Unknown, , Kernel Time: 6.000000, User Time: 0.000000, Wait Time: 661779328.000000
- Registers -
rax=0000000000000000 rbx=0000000000000000 rcx=0000000000000000 rdx=0000000000000000 rsi=0000000000000000 rdi=0000000000000000
r8=0000000000000000 r9=0000000000000000 r10=0000000000000000 r11=0000000000000000 r12=0000000000000000 r13=0000000000000000
r14=0000000000000000 r15=0000000000000000 rip=0000000000000000 rsp=0000000000000000 rbp=0000000000000000
cs=0000 ss=0000 ds=0000 es=0000 fs=0000 gs=0000 efl=00000000
- Callstack -
ChildEBP RetAddr Args to Child
(-nosymbols- PC == 0)
00000000 00000000 00000000 00000000 00000000 00000000 !+0x0
*** Dump of thread ID 31150550 (state: Unknown): ***
- Information -
Status: Base Priority: Normal, Priority: Unknown, , Kernel Time: 17179869184.000000, User Time: 21475440640.000000, Wait Time: 0.000000
- Registers -
rax=0000000000000000 rbx=0000000000000000 rcx=0000000000000000 rdx=0000000000000000 rsi=0000000000000000 rdi=0000000000000000
r8=0000000000000000 r9=0000000000000000 r10=0000000000000000 r11=0000000000000000 r12=0000000000000000 r13=0000000000000000
r14=0000000000000000 r15=0000000000000000 rip=0000000000000000 rsp=0000000000000000 rbp=0000000000000000
cs=0000 ss=0000 ds=0000 es=0000 fs=0000 gs=0000 efl=00000000
- Callstack -
ChildEBP RetAddr Args to Child
(-nosymbols- PC == 0)
00000000 00000000 00000000 00000000 00000000 00000000 !+0x0
*** Debug Message Dump ****
*** Foreground Window Data ***
Window Name :
Window Class :
Window Process ID: 0
Window Thread ID : 0
Exiting...
</stderr_txt>
]]>
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