Task 1590739608

Name 8a_hal_u_hal_8aa_4jp3789_d36_0001_1_SAVE_ALL_OUT_3010023_91_1
Workunit 1414933429
Created 28 Nov 2024, 1:29:46 UTC
Sent 28 Nov 2024, 1:29:54 UTC
Report deadline 1 Dec 2024, 1:29:54 UTC
Received 28 Nov 2024, 6:33:05 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 6278090
Run time 4 hours 59 min 18 sec
CPU time 2 hours 59 min 39 sec
Validate state Valid
Credit 135.96
Device peak FLOPS 5.66 GFLOPS
Application version Rosetta Beta v6.06
windows_x86_64
Peak working set size 284.24 MB
Peak swap size 252.05 MB
Peak disk usage 1,183.50 MB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
command: projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_windows_x86_64.exe @8a_hal_u_hal_8aa_4jp3789_d36_0001_1.flags -nstruct 10000 -cpu_run_time 28800 -boinc:max_nstruct 20000 -checkpoint_interval 120 -mute all -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -boinc::cpu_run_timeout 36000 -run::rng mt19937
Extracting in project directory: database_f5ae1de8e1.zip
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/sampling/relax_scripts/legacy.dualspace.txt
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/sampling/relax_scripts/legacy.beta_nov16.txt
        Permission denied

CreateFile() error 2 when trying set file time
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/sampling/filtered.vall.dat.2006-05-05.gz
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/sampling/orientations/orientgridall/data/c48u2947.grid.gz
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/sampling/vall.jul19.2011.torsions.gz
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/sampling/fragpicker_rama_tables/H_PP.counts.gz
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/rotamer/ExtendedOpt1-5/ile.bbdep.rotamers.lib.gz
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/rotamer/ExtendedOpt1-5/phe.bbdep.rotamers.lib.gz
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/rotamer/ExtendedOpt1-5/asp.bbdep.rotamers.lib.gz
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/rotamer/shapovalov/StpDwn_0-0-0/gln.bbind.chi3.Definitions.lib.gz
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/rotamer/shapovalov/StpDwn_0-0-0/ser.bbdep.rotamers.lib.gz
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/rotamer/beta_nov2016/lys.bbdep.rotamers.lib.gz
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/rotamer/beta_nov2016/trp.bbdep.densities.lib.gz
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/protocol_data/crick_parameters/Z6P_2_zigzag.crick_params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/protocol_data/crick_parameters/neutral_beta_strand.crick_params
        Permission denied

CreateFile() error 2 when trying set file time
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_talaris/patches/CtermTruncation.txt
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_talaris/patches/glu_carboxylated.txt
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_talaris/patches/N_acetylated.txt
        Permission denied

CreateFile() error 2 when trying set file time
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_talaris/patches/carbohydrates/N-acetyl-2-amination.txt
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_talaris/patches/carbohydrates/cutpoint_upper.txt
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_talaris/patches/carbohydrates/2-amination.txt
        Permission denied

CreateFile() error 2 when trying set file time
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/patches/carbohydrates/O2-lactylation.txt
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/patches/carbohydrates/upper_terminus.txt
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/patches/CtermProteinFull.txt
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/l-ncaa/alpha-methyl-tryptophan.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/spin_labels/C2X_non_clashing_rotamers.pdb
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/spin_labels/C4X_non_clashing_rotamers.pdb
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/nucleic/rna_nonnatural/C43.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/ketoses/hexoses/psicoses/to4-beta-D-Psip.params
        Permission denied

CreateFile() error 32 when trying set file time
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/ketoses/hexoses/fructoses/to1-beta-L-Frup.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/glucoses/to2-beta-Parp.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/glucoses/to6-beta-D-Glcf.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/glucoses/to3-alpha-D-Glcf.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/glucoses/to5-beta-L-Olif.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/glucoses/to3-beta-L-Quif.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/glucoses/to4-alpha-D-Rhop.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/guloses/to2-alpha-D-Gulp.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/guloses/to3-beta-D-Gulf.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/guloses/to6-beta-L-Gulf.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/guloses/to3-beta-D-Gulp.params
        Permission denied

CreateFile() error 32 when trying set file time
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/idoses/to3-beta-L-Idof.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/idoses/to6-alpha-D-Idop.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/idoses/to6-beta-D-Idof.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/mannoses/to2-alpha-D-Manf.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/galactoses/to2-alpha-L-Colp.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/galactoses/to4-alpha-Daup.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/pentoses/riboses/to2-beta-D-Ribp.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/pentoses/arabinoses/to5-beta-D-Araf.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/pentoses/arabinoses/to3-alpha-L-Araf.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/pentoses/arabinoses/to4-beta-D-Arap.params
        Permission denied

CreateFile() error 2 when trying set file time
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/gamma-peptide/4D2L_GALA.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/gamma-peptide/G4ALA.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_pre_talaris2013/residue_types/l-ncaa/7-methyl-tryptophan.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/virtual_enzymes/kinases/h_sapiens/PKCeta
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/dfire/dfire_pair.lib.txt
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/weights/gauss.wts
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/weights/score12_w_bicubic_interpolation_corrections.wts
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/etable/etable.twobead.lj.dat
        Permission denied

CreateFile() error 32 when trying set file time
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/pointwater/norm_trunc6/E_TYR_OH_CZ.dat
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/aa_repeat_energy/default_repeat_penalty_table.rpt_pen
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/SurfacePotential/surface_score.txt
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/ProQ/ProQM_model.3.linear_retrained_for_rosetta
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/ProQ/ProQ2_model.2.linear_retrained_for_rosetta
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/dna/bound_dna_dihedrals.txt
        Permission denied
Extracting in slot directory: minirosetta_database.zip
Using database: database\
======================================================
DONE ::     1 starting structures  10779.1 cpu seconds
This process generated    408 decoys from     408 attempts
======================================================
BOINC :: WS_max 0

BOINC :: Watchdog shutting down...
07:32:39 (43344): called boinc_finish(0)

</stderr_txt>
]]>




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