Task 1589753006

Name rb_11_22_644583_638298_ab_t000__robetta_cstwt_5.0_FT_IGNORE_THE_REST_07_05_3009994_92_0
Workunit 1414373180
Created 22 Nov 2024, 16:54:14 UTC
Sent 22 Nov 2024, 17:16:13 UTC
Report deadline 25 Nov 2024, 17:16:13 UTC
Received 25 Nov 2024, 20:20:26 UTC
Server state Over
Outcome Computation error
Client state Compute error
Exit status -1073741819 (0xC0000005) STATUS_ACCESS_VIOLATION
Computer ID 6305902
Run time 9 hours 53 min 50 sec
CPU time 5 hours 20 min 45 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 1.00 GFLOPS
Application version Rosetta v4.20
windows_x86_64
Peak working set size 562.15 MB
Peak swap size 547.89 MB
Peak disk usage 4.19 MB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<message>
(unknown error) (317) - exit code 3221225477 (0xc0000005)</message>
<stderr_txt>
command: projects/boinc.bakerlab.org_rosetta/rosetta_4.20_windows_x86_64.exe @rb_11_22_644583_638298_ab_t000__robetta_FLAGS -in::file::fasta t000_.fasta -jumps:pairing_file t000_.fasta.bbcontacts.jumps -jumps:random_sheets 1 1 1 -constraints::cst_file t000_.fasta.CB.cst -constraints:cst_weight 5.0 -constraints::cst_fa_file t000_.fasta.MIN.cst -constraints:cst_fa_weight 5.0 -in:file:boinc_wu_zip rb_11_22_644583_638298_ab_t000__robetta.zip -frag3 rb_11_22_644583_638298_ab_t000__robetta.200.3mers.index.gz -fragA rb_11_22_644583_638298_ab_t000__robetta.200.5mers.index.gz -fragB rb_11_22_644583_638298_ab_t000__robetta.200.7mers.index.gz -nstruct 10000 -cpu_run_time 28800 -boinc:max_nstruct 20000 -checkpoint_interval 120 -mute all -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -boinc::cpu_run_timeout 36000 -run::rng mt19937 -constant_seed -jran 2930713
Using database: database_357d5d93529_n_methyl\minirosetta_database
failed to create shared mem segment: rosetta Size: 25001680


Unhandled Exception Detected...

- Unhandled Exception Record -
Reason: Access Violation (0xc0000005) at address 0x00007FF66C6F7698 write attempt to address 0x017D7EC9

Engaging BOINC Windows Runtime Debugger...



********************


BOINC Windows Runtime Debugger Version 7.9.0


Dump Timestamp    : 11/25/24 20:18:57
Install Directory : C:\Program Files\BOINC\
Data Directory    : C:\ProgramData\BOINC
Project Symstore  : https://boinc.bakerlab.org/rosetta/symstore
LoadLibraryA( C:\ProgramData\BOINC\dbghelp.dll ): GetLastError = 126
Loaded Library    : dbghelp.dll
LoadLibraryA( C:\ProgramData\BOINC\symsrv.dll ): GetLastError = 126
LoadLibraryA( symsrv.dll ): GetLastError = 126
LoadLibraryA( C:\ProgramData\BOINC\srcsrv.dll ): GetLastError = 126
LoadLibraryA( srcsrv.dll ): GetLastError = 126
LoadLibraryA( C:\ProgramData\BOINC\version.dll ): GetLastError = 126
Loaded Library    : version.dll
Debugger Engine   : 4.0.5.0
Symbol Search Path: C:\ProgramData\BOINC\slots\1;C:\ProgramData\BOINC\projects\boinc.bakerlab.org_rosetta;srv*C:\ProgramData\BOINC\projects\boinc.bakerlab.org_rosetta\symbols*http://msdl.microsoft.com/download/symbols;srv*C:\ProgramData\BOINC\projects\boinc.bakerlab.org_rosetta\symbols*https://boinc.bakerlab.org/rosetta/symstore


ModLoad: 000000006b440000 00000000057ef000 C:\ProgramData\BOINC\projects\boinc.bakerlab.org_rosetta\rosetta_4.20_windows_x86_64.exe (-exported- Symbols Loaded)
    Linked PDB Filename   : C:\cygwin64\home\boinc\4.17\Rosetta\main\source\ide\VisualStudio\x64\BoincRelease\rosetta_4.20_windows_x86_64.pdb

ModLoad: 000000006e1d0000 0000000000217000 C:\windows\SYSTEM32\ntdll.dll (6.2.22621.4391) (-exported- Symbols Loaded)
    Linked PDB Filename   : ntdll.pdb
    File Version          : 10.0.22621.4249 (WinBuild.160101.0800)
    Company Name          : Microsoft Corporation
    Product Name          : Microsoft&#174; Windows&#174; Operating System
    Product Version       : 10.0.22621.4249

ModLoad: 000000006db80000 00000000000c4000 C:\windows\System32\KERNEL32.DLL (6.2.22621.4391) (-exported- Symbols Loaded)
    Linked PDB Filename   : kernel32.pdb
    File Version          : 10.0.22621.4391 (WinBuild.160101.0800)
    Company Name          : Microsoft Corporation
    Product Name          : Microsoft&#174; Windows&#174; Operating System
    Product Version       : 10.0.22621.4391

ModLoad: 000000006b8e0000 00000000003b9000 C:\windows\System32\KERNELBASE.dll (6.2.22621.4391) (-exported- Symbols Loaded)
    Linked PDB Filename   : kernelbase.pdb
    File Version          : 10.0.22621.4391 (WinBuild.160101.0800)
    Company Name          : Microsoft Corporation
    Product Name          : Microsoft&#174; Windows&#174; Operating System
    Product Version       : 10.0.22621.4391

ModLoad: 000000006dfe0000 0000000000071000 C:\windows\System32\WS2_32.dll (6.2.22621.1) (-exported- Symbols Loaded)
    Linked PDB Filename   : ws2_32.pdb
    File Version          : 10.0.22621.1 (WinBuild.160101.0800)
    Company Name          : Microsoft Corporation
    Product Name          : Microsoft&#174; Windows&#174; Operating System
    Product Version       : 10.0.22621.1

ModLoad: 000000006cd30000 0000000000114000 C:\windows\System32\RPCRT4.dll (6.2.22621.4249) (-exported- Symbols Loaded)
    Linked PDB Filename   : rpcrt4.pdb
    File Version          : 10.0.22621.2506 (WinBuild.160101.0800)
    Company Name          : Microsoft Corporation
    Product Name          : Microsoft&#174; Windows&#174; Operating System
    Product Version       : 10.0.22621.2506

ModLoad: 000000006cb50000 00000000001ae000 C:\windows\System32\USER32.dll (6.2.22621.4391) (-exported- Symbols Loaded)
    Linked PDB Filename   : user32.pdb
    File Version          : 10.0.22621.4599 (WinBuild.160101.0800)
    Company Name          : Microsoft Corporation
    Product Name          : Microsoft&#174; Windows&#174; Operating System
    Product Version       : 10.0.22621.4599

ModLoad: 000000006bec0000 0000000000026000 C:\windows\System32\win32u.dll (6.2.22621.4460) (-exported- Symbols Loaded)
    Linked PDB Filename   : win32u.pdb
    File Version          : 10.0.22621.4460 (WinBuild.160101.0800)
    Company Name          : Microsoft Corporation
    Product Name          : Microsoft&#174; Windows&#174; Operating System
    Product Version       : 10.0.22621.4460

ModLoad: 000000006e160000 0000000000029000 C:\windows\System32\GDI32.dll (6.2.22621.4036) (-exported- Symbols Loaded)
    Linked PDB Filename   : gdi32.pdb
    File Version          : 10.0.22621.4036 (WinBuild.160101.0800)
    Company Name          : Microsoft Corporation
    Product Name          : Microsoft&#174; Windows&#174; Operating System
    Product Version       : 10.0.22621.4036

ModLoad: 000000006b6a0000 000000000011b000 C:\windows\System32\gdi32full.dll (6.2.22621.4391) (-exported- Symbols Loaded)
    Linked PDB Filename   : gdi32full.pdb
    File Version          : 10.0.22621.4391 (WinBuild.160101.0800)
    Company Name          : Microsoft Corporation
    Product Name          : Microsoft&#174; Windows&#174; Operating System
    Product Version       : 10.0.22621.4391

ModLoad: 000000006b4d0000 000000000009a000 C:\windows\System32\msvcp_win.dll (6.2.22621.3374) (-exported- Symbols Loaded)
    Linked PDB Filename   : msvcp_win.pdb
    File Version          : 10.0.22621.3374 (WinBuild.160101.0800)
    Company Name          : Microsoft Corporation
    Product Name          : Microsoft&#174; Windows&#174; Operating System
    Product Version       : 10.0.22621.3374

ModLoad: 000000006b7c0000 0000000000111000 C:\windows\System32\ucrtbase.dll (6.2.22621.3593) (-exported- Symbols Loaded)
    Linked PDB Filename   : ucrtbase.pdb
    File Version          : 10.0.22621.3593 (WinBuild.160101.0800)
    Company Name          : Microsoft Corporation
    Product Name          : Microsoft&#174; Windows&#174; Operating System
    Product Version       : 10.0.22621.3593

ModLoad: 000000006cf20000 00000000000b2000 C:\windows\System32\ADVAPI32.dll (6.2.22621.4391) (-exported- Symbols Loaded)
    Linked PDB Filename   : advapi32.pdb
    File Version          : 10.0.22621.1 (WinBuild.160101.0800)
    Company Name          : Microsoft Corporation
    Product Name          : Microsoft&#174; Windows&#174; Operating System
    Product Version       : 10.0.22621.1

ModLoad: 000000006e060000 00000000000a7000 C:\windows\System32\msvcrt.dll (7.0.22621.2506) (-exported- Symbols Loaded)
    Linked PDB Filename   : msvcrt.pdb
    File Version          : 7.0.22621.2506 (WinBuild.160101.0800)
    Company Name          : Microsoft Corporation
    Product Name          : Microsoft&#174; Windows&#174; Operating System
    Product Version       : 7.0.22621.2506

ModLoad: 000000006c780000 00000000000a7000 C:\windows\System32\sechost.dll (6.2.22621.4391) (-exported- Symbols Loaded)
    Linked PDB Filename   : sechost.pdb
    File Version          : 10.0.22621.1 (WinBuild.160101.0800)
    Company Name          : Microsoft Corporation
    Product Name          : Microsoft&#174; Windows&#174; Operating System
    Product Version       : 10.0.22621.1

ModLoad: 000000006bd20000 0000000000028000 C:\windows\System32\bcrypt.dll (6.2.22621.2506) (-exported- Symbols Loaded)
    Linked PDB Filename   : bcrypt.pdb
    File Version          : 10.0.22621.1 (WinBuild.160101.0800)
    Company Name          : Microsoft Corporation
    Product Name          : Microsoft&#174; Windows&#174; Operating System
    Product Version       : 10.0.22621.1

ModLoad: 000000006c9a0000 0000000000031000 C:\windows\System32\IMM32.DLL (6.2.22621.3374) (-exported- Symbols Loaded)
    Linked PDB Filename   : imm32.pdb
    File Version          : 10.0.22621.3374 (WinBuild.160101.0800)
    Company Name          : Microsoft Corporation
    Product Name          : Microsoft&#174; Windows&#174; Operating System
    Product Version       : 10.0.22621.3374

ModLoad: 000000006a5d0000 0000000000018000 C:\windows\SYSTEM32\kernel.appcore.dll (6.2.22621.3958) (-exported- Symbols Loaded)
    Linked PDB Filename   : Kernel.Appcore.pdb
    File Version          : 10.0.22621.3958 (WinBuild.160101.0800)
    Company Name          : Microsoft Corporation
    Product Name          : Microsoft&#174; Windows&#174; Operating System
    Product Version       : 10.0.22621.3958

ModLoad: 000000006a6e0000 0000000000034000 C:\windows\SYSTEM32\ntmarta.dll (6.2.22621.1) (-exported- Symbols Loaded)
    Linked PDB Filename   : ntmarta.pdb
    File Version          : 10.0.22621.1 (WinBuild.160101.0800)
    Company Name          : Microsoft Corporation
    Product Name          : Microsoft&#174; Windows&#174; Operating System
    Product Version       : 10.0.22621.1

ModLoad: 00000000688f0000 0000000000232000 C:\windows\SYSTEM32\dbghelp.dll (6.2.22621.3593) (-exported- Symbols Loaded)
    Linked PDB Filename   : dbghelp.pdb
    File Version          : 10.0.22621.3593 (WinBuild.160101.0800)
    Company Name          : Microsoft Corporation
    Product Name          : Microsoft&#174; Windows&#174; Operating System
    Product Version       : 10.0.22621.3593

ModLoad: 000000006bf70000 000000000038f000 C:\windows\System32\combase.dll (6.2.22621.4391) (-exported- Symbols Loaded)
    Linked PDB Filename   : combase.pdb
    File Version          : 10.0.22621.1 (WinBuild.160101.0800)
    Company Name          : Microsoft Corporation
    Product Name          : Microsoft&#174; Windows&#174; Operating System
    Product Version       : 10.0.22621.1

ModLoad: 000000006c8c0000 00000000000d7000 C:\windows\System32\OLEAUT32.dll (6.2.22621.3672) (-exported- Symbols Loaded)
    Linked PDB Filename   : oleaut32.pdb
    File Version          : 10.0.22621.3672 (WinBuild.160101.0800)
    Company Name          : Microsoft Corporation
    Product Name          : Microsoft&#174; Windows&#174; Operating System
    Product Version       : 10.0.22621.3672

ModLoad: 0000000061ca0000 000000000000a000 C:\windows\SYSTEM32\version.dll (6.2.22621.1) (-exported- Symbols Loaded)
    Linked PDB Filename   : version.pdb
    File Version          : 10.0.22621.1 (WinBuild.160101.0800)
    Company Name          : Microsoft Corporation
    Product Name          : Microsoft&#174; Windows&#174; Operating System
    Product Version       : 10.0.22621.1

ModLoad: 000000006bca0000 000000000007b000 C:\windows\System32\bcryptPrimitives.dll (6.2.22621.4317) (-exported- Symbols Loaded)
    Linked PDB Filename   : bcryptprimitives.pdb
    File Version          : 10.0.22621.4317 (WinBuild.160101.0800)
    Company Name          : Microsoft Corporation
    Product Name          : Microsoft&#174; Windows&#174; Operating System
    Product Version       : 10.0.22621.4317



*** Dump of the Process Statistics: ***

- I/O Operations Counters -
Read: 7, Write: 275, Other 79

- I/O Transfers Counters -
Read: 24464, Write: 285, Other 3188

- Paged Pool Usage -
QuotaPagedPoolUsage: 273792, QuotaPeakPagedPoolUsage: 273792
QuotaNonPagedPoolUsage: 8016, QuotaPeakNonPagedPoolUsage: 10664

- Virtual Memory Usage -
VirtualSize: 13983744, PeakVirtualSize: 874766336

- Pagefile Usage -
PagefileUsage: 13983744, PeakPagefileUsage: 14049280

- Working Set Size -
WorkingSetSize: 42401792, PeakWorkingSetSize: 42401792, PageFaultCount: 10461

*** Dump of thread ID 3920 (state: Initialized): ***

- Information -
Status: Base Priority: Normal, Priority: Normal, , Kernel Time: 0.000000, User Time: 0.000000, Wait Time: 0.000000

- Unhandled Exception Record -
Reason: Access Violation (0xc0000005) at address 0x00007FF66C6F7698 write attempt to address 0x017D7EC9

- Registers -
rax=0000000000000000 rbx=00000000707eccf8 rcx=00000000ffffffff rdx=00000000707ed110 rsi=00000000319ab2e0 rdi=0000000000000030
r8=000000008e149b88 r9=0000000000000000 r10=0000000000000000 r11=0000000000000246 r12=0000000000000000 r13=0000000000000000
r14=0000000000000000 r15=0000000000000000 rip=000000006c6f7698 rsp=000000008e149db0 rbp=0000000000000000
cs=0033  ss=002b  ds=002b  es=002b  fs=0053  gs=002b             efl=00010206

- Callstack -
ChildEBP RetAddr  Args to Child
8e149dd0 6c6f7917 707eccf8 00000000 70498128 00000030 rosetta_4.20_windows_x86_64!xmlCheckHTTPInput+0x0 
8e149f10 6b8bf073 00000000 00000000 00000000 00000000 rosetta_4.20_windows_x86_64!xmlCheckHTTPInput+0x0 
8e15fb40 6b8cb215 00000000 00000000 707eccf8 00000000 rosetta_4.20_windows_x86_64!xmlParserInputRead+0x0 
8e15fb80 6db9259d 00000000 00000000 00000000 00000000 rosetta_4.20_windows_x86_64!xmlParserInputRead+0x0 
8e15fbb0 6e22af38 00000000 00000000 00000000 00000000 KERNEL32!BaseThreadInitThunk+0x0 
8e15fc30 00000000 00000000 00000000 00000000 00000000 ntdll!RtlUserThreadStart+0x0 

*** Dump of thread ID 32764 (state: Initialized): ***

- Information -
Status: Base Priority: Normal, Priority: Unknown, , Kernel Time: 6.000000, User Time: 0.000000, Wait Time: 1106168832.000000

- Registers -
rax=00000000000001e3 rbx=0000000063e0db70 rcx=00000000000000a0 rdx=0000000063e10040 rsi=0000000000000001 rdi=0000000063e103c0
r8=00000000fcddeb70 r9=000000000000006c r10=0000000063e15130 r11=00000000fcdde980 r12=0000000000000000 r13=0000000000000000
r14=000000000000ffff r15=0000000000000000 rip=000000006e273e24 rsp=00000000fcddf4d8 rbp=0000000000000000
cs=0033  ss=002b  ds=0000  es=0000  fs=0000  gs=0000             efl=00000246

- Callstack -
ChildEBP RetAddr  Args to Child
00000000 00000000 00000000 00000000 00000000 00000000 ntdll!NtWaitForWorkViaWorkerFactory+0x0 

*** Dump of thread ID 31145847 (state: Unknown): ***

- Information -
Status: Base Priority: Normal, Priority: Unknown, , Kernel Time: 17179869184.000000, User Time: 21474836480.000000, Wait Time: 0.000000

- Registers -
rax=0000000000000000 rbx=0000000000000000 rcx=0000000000000000 rdx=0000000000000000 rsi=0000000000000000 rdi=0000000000000000
r8=0000000000000000 r9=0000000000000000 r10=0000000000000000 r11=0000000000000000 r12=0000000000000000 r13=0000000000000000
r14=0000000000000000 r15=0000000000000000 rip=0000000000000000 rsp=0000000000000000 rbp=0000000000000000
cs=0000  ss=0000  ds=0000  es=0000  fs=0000  gs=0000             efl=00000000

- Callstack -
ChildEBP RetAddr  Args to Child
(-nosymbols- PC == 0)
00000000 00000000 00000000 00000000 00000000 00000000 !+0x0 


*** Debug Message Dump ****


*** Foreground Window Data ***
    Window Name      : 
    Window Class     : 
    Window Process ID: 0
    Window Thread ID : 0

Exiting...

</stderr_txt>
]]>




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