Name | rb_11_08_640784_634379_ab_t000__robetta_cstwt_5.0_FT_IGNORE_THE_REST_09_05_3009231_43_0 |
Workunit | 1413939020 |
Created | 8 Nov 2024, 8:34:26 UTC |
Sent | 8 Nov 2024, 8:49:45 UTC |
Report deadline | 11 Nov 2024, 8:49:45 UTC |
Received | 8 Nov 2024, 10:32:41 UTC |
Server state | Over |
Outcome | Computation error |
Client state | Compute error |
Exit status | 1 (0x00000001) Unknown error code |
Computer ID | 6219885 |
Run time | 1 hours 40 min 32 sec |
CPU time | 1 hours 34 min 51 sec |
Validate state | Invalid |
Credit | 0.00 |
Device peak FLOPS | 3.34 GFLOPS |
Application version | Rosetta v4.20 x86_64-apple-darwin |
Peak working set size | 1,020.32 MB |
Peak swap size | 37,988.13 MB |
Peak disk usage | 24.67 MB |
<core_client_version>7.20.2</core_client_version> <![CDATA[ <message> process exited with code 1 (0x1, -255)</message> <stderr_txt> command: rosetta_4.20_x86_64-apple-darwin @rb_11_08_640784_634379_ab_t000__robetta_FLAGS -in::file::fasta t000_.fasta -jumps:pairing_file t000_.fasta.bbcontacts.jumps -jumps:random_sheets 1 -constraints::cst_file t000_.fasta.CB.cst -constraints:cst_weight 5.0 -constraints::cst_fa_file t000_.fasta.MIN.cst -constraints:cst_fa_weight 5.0 -in:file:boinc_wu_zip rb_11_08_640784_634379_ab_t000__robetta.zip -frag3 rb_11_08_640784_634379_ab_t000__robetta.200.3mers.index.gz -fragA rb_11_08_640784_634379_ab_t000__robetta.200.5mers.index.gz -fragB rb_11_08_640784_634379_ab_t000__robetta.200.9mers.index.gz -nstruct 10000 -cpu_run_time 28800 -boinc:max_nstruct 20000 -checkpoint_interval 120 -mute all -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -boinc::cpu_run_timeout 36000 -run::rng mt19937 -constant_seed -jran 3215754 Using database: database_357d5d93529_n_methyl/minirosetta_database [ ERROR ]: Caught exception: File: src/core/pack/dunbrack/SingleResidueDunbrackLibrary.hh:306 chi angle must be between -180 and 180: nan ------------------------ Begin developer's backtrace ------------------------- BACKTRACE: 0 rosetta_4.20_x86_64-apple-darwin 0x000000011277f630 Kernel::kernel_precomputed(int, int) const + 322720 1 rosetta_4.20_x86_64-apple-darwin 0x000000011277eeb1 Kernel::kernel_precomputed(int, int) const + 320801 2 rosetta_4.20_x86_64-apple-darwin 0x0000000110e8d21e core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 1923262 3 rosetta_4.20_x86_64-apple-darwin 0x0000000110e8b00f core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 1914543 4 rosetta_4.20_x86_64-apple-darwin 0x0000000110d39f18 core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 533944 5 rosetta_4.20_x86_64-apple-darwin 0x00000001115b31e6 boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, core::pose::Pose, core::conformation::signals::XYZEvent const&>, boost::_bi::list2<boost::_bi::value<core::pose::Pose*>, boost::arg<1> > >, void, core::conformation::signals::XYZEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::XYZEvent) + 1754614 6 rosetta_4.20_x86_64-apple-darwin 0x0000000111650bc6 core::scoring::compare_by_abs(void const*, void const*) + 306326 7 rosetta_4.20_x86_64-apple-darwin 0x000000011164a9aa core::scoring::compare_by_abs(void const*, void const*) + 281210 8 rosetta_4.20_x86_64-apple-darwin 0x0000000110cb3d53 boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::moves::PyMOLObserver, core::pose::signals::ConformationEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::moves::PyMOLObserver*>, boost::arg<1> > >, void, core::pose::signals::ConformationEvent>::invoke(boost::detail::function::function_buffer&, core::pose::signals::ConformationEvent) + 2466403 9 rosetta_4.20_x86_64-apple-darwin 0x0000000110cbc4b7 core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 19287 10 rosetta_4.20_x86_64-apple-darwin 0x0000000110cbc121 core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 18369 11 rosetta_4.20_x86_64-apple-darwin 0x0000000110cc4c7e core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 54046 12 rosetta_4.20_x86_64-apple-darwin 0x0000000110cbf925 core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 32709 13 rosetta_4.20_x86_64-apple-darwin 0x0000000110cb131e boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::moves::PyMOLObserver, core::pose::signals::ConformationEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::moves::PyMOLObserver*>, boost::arg<1> > >, void, core::pose::signals::ConformationEvent>::invoke(boost::detail::function::function_buffer&, core::pose::signals::ConformationEvent) + 2455598 14 rosetta_4.20_x86_64-apple-darwin 0x00000001103c7f14 boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1> > >, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 7259236 15 rosetta_4.20_x86_64-apple-darwin 0x00000001103c7ac2 boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1> > >, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 7258130 16 rosetta_4.20_x86_64-apple-darwin 0x00000001103c819d boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1> > >, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 7259885 17 rosetta_4.20_x86_64-apple-darwin 0x000000010ff8a013 boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1> > >, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 2811235 18 rosetta_4.20_x86_64-apple-darwin 0x000000010ff8b38b boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1> > >, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 2816219 19 rosetta_4.20_x86_64-apple-darwin 0x000000010ff8d8ad boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1> > >, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 2825725 20 rosetta_4.20_x86_64-apple-darwin 0x000000010ffb465f boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1> > >, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 2984879 21 rosetta_4.20_x86_64-apple-darwin 0x000000010f203ea2 protocols::multistage_rosetta_scripts::cluster::complex_type_name_for_cluster_metric(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&) + 3828914 22 rosetta_4.20_x86_64-apple-darwin 0x000000010f210226 protocols::multistage_rosetta_scripts::cluster::complex_type_name_for_cluster_metric(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&) + 3878966 23 rosetta_4.20_x86_64-apple-darwin 0x000000010f212a5f protocols::multistage_rosetta_scripts::cluster::complex_type_name_for_cluster_metric(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&) + 3889263 24 rosetta_4.20_x86_64-apple-darwin 0x000000010e7a9128 rosetta_4.20_x86_64-apple-darwin + 24872 25 dyld 0x000000011ca4f52e start + 462 ------------------------- End developer's backtrace -------------------------- </stderr_txt> ]]>
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