Task 1584291044

Name rb_10_05_635554_629305_ab_t000__robetta_cstwt_5.0_FT_IGNORE_THE_REST_08_12_2980864_5_0
Workunit 1409562110
Created 5 Oct 2024, 19:18:41 UTC
Sent 5 Oct 2024, 19:19:01 UTC
Report deadline 8 Oct 2024, 19:19:01 UTC
Received 5 Oct 2024, 20:57:31 UTC
Server state Over
Outcome Computation error
Client state Compute error
Exit status 1 (0x00000001) Unknown error code
Computer ID 6267291
Run time 14 min 35 sec
CPU time 13 min 15 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 5.56 GFLOPS
Application version Rosetta v4.20
x86_64-apple-darwin
Peak working set size 895.79 MB
Peak swap size 37,082.58 MB
Peak disk usage 24.34 MB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<message>
process exited with code 1 (0x1, -255)</message>
<stderr_txt>
command: rosetta_4.20_x86_64-apple-darwin @rb_10_05_635554_629305_ab_t000__robetta_FLAGS -in::file::fasta t000_.fasta -jumps:pairing_file t000_.fasta.bbcontacts.jumps -jumps:random_sheets 1 -constraints::cst_file t000_.fasta.CB.cst -constraints:cst_weight 5.0 -constraints::cst_fa_file t000_.fasta.MIN.cst -constraints:cst_fa_weight 5.0 -in:file:boinc_wu_zip rb_10_05_635554_629305_ab_t000__robetta.zip -frag3 rb_10_05_635554_629305_ab_t000__robetta.200.3mers.index.gz -fragA rb_10_05_635554_629305_ab_t000__robetta.200.12mers.index.gz -fragB rb_10_05_635554_629305_ab_t000__robetta.200.8mers.index.gz -nstruct 10000 -cpu_run_time 28800 -boinc:max_nstruct 20000 -checkpoint_interval 120 -mute all -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -boinc::cpu_run_timeout 36000 -run::rng mt19937 -constant_seed -jran 1972394
Using database: database_357d5d93529_n_methyl/minirosetta_database

[ ERROR ]: Caught exception:


File: src/core/pack/dunbrack/SingleResidueDunbrackLibrary.hh:306
chi angle must be between -180 and 180: nan
 ------------------------ Begin developer's backtrace ------------------------- 
BACKTRACE:
0   rosetta_4.20_x86_64-apple-darwin    0x000000010613b630 Kernel::kernel_precomputed(int, int) const + 322720
1   rosetta_4.20_x86_64-apple-darwin    0x000000010613aeb1 Kernel::kernel_precomputed(int, int) const + 320801
2   rosetta_4.20_x86_64-apple-darwin    0x000000010472b751 core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 753137
3   rosetta_4.20_x86_64-apple-darwin    0x0000000104729b7b core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 746011
4   rosetta_4.20_x86_64-apple-darwin    0x00000001049066d6 core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 2698614
5   rosetta_4.20_x86_64-apple-darwin    0x00000001046f5f18 core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 533944
6   rosetta_4.20_x86_64-apple-darwin    0x0000000104f6f1e6 boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, core::pose::Pose, core::conformation::signals::XYZEvent const&>, boost::_bi::list2<boost::_bi::value<core::pose::Pose*>, boost::arg<1>>>, void, core::conformation::signals::XYZEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::XYZEvent) + 1754614
7   rosetta_4.20_x86_64-apple-darwin    0x000000010500cbc6 core::scoring::compare_by_abs(void const*, void const*) + 306326
8   rosetta_4.20_x86_64-apple-darwin    0x00000001050069aa core::scoring::compare_by_abs(void const*, void const*) + 281210
9   rosetta_4.20_x86_64-apple-darwin    0x000000010466fd53 boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::moves::PyMOLObserver, core::pose::signals::ConformationEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::moves::PyMOLObserver*>, boost::arg<1>>>, void, core::pose::signals::ConformationEvent>::invoke(boost::detail::function::function_buffer&, core::pose::signals::ConformationEvent) + 2466403
10  rosetta_4.20_x86_64-apple-darwin    0x00000001046784b7 core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 19287
11  rosetta_4.20_x86_64-apple-darwin    0x0000000104678121 core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 18369
12  rosetta_4.20_x86_64-apple-darwin    0x0000000104680c7e core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 54046
13  rosetta_4.20_x86_64-apple-darwin    0x000000010467b925 core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 32709
14  rosetta_4.20_x86_64-apple-darwin    0x000000010466d31e boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::moves::PyMOLObserver, core::pose::signals::ConformationEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::moves::PyMOLObserver*>, boost::arg<1>>>, void, core::pose::signals::ConformationEvent>::invoke(boost::detail::function::function_buffer&, core::pose::signals::ConformationEvent) + 2455598
15  rosetta_4.20_x86_64-apple-darwin    0x0000000103d83f14 boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1>>>, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 7259236
16  rosetta_4.20_x86_64-apple-darwin    0x0000000103d83ac2 boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1>>>, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 7258130
17  rosetta_4.20_x86_64-apple-darwin    0x0000000103d8419d boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1>>>, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 7259885
18  rosetta_4.20_x86_64-apple-darwin    0x0000000103946013 boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1>>>, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 2811235
19  rosetta_4.20_x86_64-apple-darwin    0x000000010394738b boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1>>>, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 2816219
20  rosetta_4.20_x86_64-apple-darwin    0x00000001039498ad boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1>>>, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 2825725
21  rosetta_4.20_x86_64-apple-darwin    0x000000010397065f boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1>>>, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 2984879
22  rosetta_4.20_x86_64-apple-darwin    0x0000000102bbfea2 protocols::multistage_rosetta_scripts::cluster::complex_type_name_for_cluster_metric(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>> const&) + 3828914
23  rosetta_4.20_x86_64-apple-darwin    0x0000000102bcc226 protocols::multistage_rosetta_scripts::cluster::complex_type_name_for_cluster_metric(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>> const&) + 3878966
24  rosetta_4.20_x86_64-apple-darwin    0x0000000102bcea5f protocols::multistage_rosetta_scripts::cluster::complex_type_name_for_cluster_metric(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>> const&) + 3889263
25  rosetta_4.20_x86_64-apple-darwin    0x0000000102165128 rosetta_4.20_x86_64-apple-darwin + 24872
26  dyld                                0x00000002086c7418 start + 1896
 ------------------------- End developer's backtrace -------------------------- 

</stderr_txt>
]]>




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