Task 1584241143

Name RosettaVS_SAVE_ALL_OUT_NOJRAN_SETDB1_6BHE_fulldb_IGNORE_THE_REST_ucyRgD_1_609_2980825_1_1
Workunit 1409290538
Created 4 Oct 2024, 6:45:42 UTC
Sent 4 Oct 2024, 6:45:46 UTC
Report deadline 7 Oct 2024, 6:45:46 UTC
Received 4 Oct 2024, 19:14:19 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 6237787
Run time 7 hours 45 min 41 sec
CPU time 7 hours 37 min 27 sec
Validate state Valid
Credit 473.97
Device peak FLOPS 6.28 GFLOPS
Application version Rosetta Beta v6.06
x86_64-pc-linux-gnu
Peak working set size 1,538.70 MB
Peak swap size 1,699.12 MB
Peak disk usage 24.76 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
command: ../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu @SETDB1_6BHE_fulldb_ucyRgD_1_609.flags -nstruct 10000 -cpu_run_time 28800 -boinc:max_nstruct 20000 -checkpoint_interval 120 -mute all -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -boinc::cpu_run_timeout 36000 -run::rng mt19937
Using database: database_f5ae1de8e1/database
Starting watchdog...
Watchdog active.

[ ERROR ]: Caught exception:


File: src/core/kinematics/Stub.cc:106
Error in Stub::from_four_points(): 

File: src/numeric/xyzVector.hh:654
Cannot create normalized xyzVector from vector of length() zero.  Error occurred when trying to normalize the vector between points A and B.  A=[26986177625185640448.000000,21648353758109089792.000000,1614636122640090112.000000], B=[26986177625185640448.000000,21648353758109089792.000000,1614636122640090112.000000].
 ------------------------ Begin developer's backtrace ------------------------- 
BACKTRACE:
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x85813e4) [0x55c9b6e903e4]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x8599fb4) [0x55c9b6ea8fb4]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0xc050e1) [0x55c9af5140e1]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x762802f) [0x55c9b5f3702f]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x7639cbf) [0x55c9b5f48cbf]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x32941fe) [0x55c9b1ba31fe]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x6232f32) [0x55c9b4b41f32]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x5ae370e) [0x55c9b43f270e]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x5ae9c95) [0x55c9b43f8c95]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x3260853) [0x55c9b1b6f853]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x317c2e4) [0x55c9b1a8b2e4]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x31895bc) [0x55c9b1a985bc]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x318f35c) [0x55c9b1a9e35c]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x57d84d1) [0x55c9b40e74d1]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x57d8bae) [0x55c9b40e7bae]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x57d911e) [0x55c9b40e811e]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x57da356) [0x55c9b40e9356]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x5539fda) [0x55c9b3e48fda]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x553b4fe) [0x55c9b3e4a4fe]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x5853b97) [0x55c9b4162b97]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0x585255a) [0x55c9b416155a]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0xce0773) [0x55c9af5ef773]
/lib/x86_64-linux-gnu/libc.so.6(+0x27b8a) [0x7fe02b443b8a]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7fe02b443c45]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu(+0xf22fca) [0x55c9af831fca]
 ------------------------- End developer's backtrace -------------------------- 
======================================================
DONE ::     5 starting structures  27447.7 cpu seconds
This process generated      5 decoys from       5 attempts
======================================================
BOINC :: WS_max 1.61344e+09

BOINC :: Watchdog shutting down...
15:08:21 (1768801): called boinc_finish(0)

</stderr_txt>
]]>




©2024 University of Washington
https://www.bakerlab.org