Task 1584226467
| Name | RosettaVS_SAVE_ALL_OUT_NOJRAN_SETDB1_6BHE_fulldb_IGNORE_THE_REST_ucyRgD_5_5626_2980832_1_1 |
| Workunit | 1409364014 |
| Created | 3 Oct 2024, 6:39:24 UTC |
| Sent | 3 Oct 2024, 6:39:27 UTC |
| Report deadline | 6 Oct 2024, 6:39:27 UTC |
| Received | 3 Oct 2024, 19:11:54 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 3178704 |
| Run time | 8 hours 16 min 44 sec |
| CPU time | 7 hours 38 min 37 sec |
| Validate state | Valid |
| Credit | 50.52 |
| Device peak FLOPS | 1.37 GFLOPS |
| Application version | Rosetta Beta v6.06 windows_x86_64 |
| Peak working set size | 1,208.12 MB |
| Peak swap size | 1,469.66 MB |
| Peak disk usage | 1,182.49 MB |
Stderr output
<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
command: projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_windows_x86_64.exe @SETDB1_6BHE_fulldb_ucyRgD_5_5626.flags -nstruct 10000 -cpu_run_time 28800 -boinc:max_nstruct 20000 -checkpoint_interval 120 -mute all -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -boinc::cpu_run_timeout 36000 -run::rng mt19937
Extracting in project directory: database_f5ae1de8e1.zip
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_talaris/residue_types/carbohydrates/to4-alpha-L-Fucp.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_talaris/residue_types/carbohydrates/to4-beta-D-Manp.params
Permission denied
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/centroid/patches/oop_pre.txt
Permission denied
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/centroid/residue_types/staple/08B.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/centroid_pre_talaris2013/residue_types/ILE.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/centroid_pre_talaris2013/residue_types/VAL.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/centroid_pre_talaris2013/residue_types/08B.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/metapatches/aromatic_methylation.txt
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/patches/carbohydrates/2-fluorination.txt
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/patches/nucleic/dna/dna_cutpoint_upper.txt
Permission denied
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/l-ncaa/beta-fluoro-alanine.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/l-ncaa/APA.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/l-ncaa/YPN.params
Permission denied
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/ptm-caa/SEP.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/spin_labels/C2X_non_clashing_rotamers.pdb
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/spin_labels/C4X_non_clashing_rotamers.pdb
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/beta-peptide/B3A.params
Permission denied
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/nucleic/rna_nonnatural/M2G.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/nucleic/rna_nonnatural/5FC.params
No such file or directory
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/glucoses/to3-beta-D-Glcp.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/glucoses/to4-beta-L-Olip.params
No such file or directory
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/idoses/to6-beta-D-Idop.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/idoses/to4-beta-L-Idop.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/taloses/to5-beta-L-Talf.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/mannoses/to2-beta-Tyvp.params
Permission denied
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/polyaramids/UAA.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/polyaramids/QR1.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/polyaramids/QRG.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/polyaramids/PAI.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/polyaramids/KAV.params
Permission denied
error: cannot create C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/polyaramids/LA3.params
Permission denied
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/gamma-peptide/G4VAL.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/pdb_components/components.3.cif
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/pdb_components/components.Y.cif
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/pdb_components/components.K.cif
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/pdb_components/components.L.cif
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/pdb_components/components.B.cif
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/pdb_components/components.2.cif
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/pdb_components/components.5.cif
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/pdb_components/components.C.cif
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/pdb_components/components.M.cif
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/pdb_components/components.J.cif
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/pdb_components/components.I.cif
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/pdb_components/components.N.cif
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/pdb_components/components.R.cif
Permission denied
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/pdb_components/components.8.cif
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/pdb_components/components.1.cif
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/pdb_components/components.S.cif
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/pdb_components/components.T.cif
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/pdb_components/components.F.cif
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/pdb_components/components.A.cif
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/pdb_components/components.0.cif
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/pdb_components/components.9.cif
Permission denied
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/etable/etable.twobead.dlj.dat
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/jump_templates_SSpairs_v2.dat
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/bondlength_bondangle_talaris/default-improper.txt
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/P_AA_pp/shapovalov/2.5deg/kappa50/a20.prop
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/P_AA_pp/shapovalov/2.5deg/kappa131/a20.prop
Permission denied
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/rama/Rama09_noEH_kernel25_it08.dat
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/rama/beta_aa/B3A.rama
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/rama/beta_aa/B3A_as_B3G.rama
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/rama/beta_aa/B2A.rama
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/rama/beta_aa/TWC_B3G.rama
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/rama/beta_aa/cisACPC_prepro.rama
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/rama/beta_aa/TWC_B3A.rama
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/rama/beta_aa/B3G.rama
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/rama/alpha_ncaa/AIB_general.old.rama
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/rama/Rama_smooth_dyn.dat_ss_6.4
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/rama/oligourea/OU3_PRO_rama.txt
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/rama/oligourea/OU3_ALA_rama.txt
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/rama/aramid/QAA_rama.txt
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/rama/aramid/LAA_rama.txt
Permission denied
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/facts/SER.params
Permission denied
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/mhc_epitope/iedb_data.db
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/mhc_epitope/iedb_data.info
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/unfolded/unfolded_state_residue_energies_rna
Permission denied
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/hbonds/score12_params/HBAccHybridization.csv
Permission denied
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/goap/angle_table.dat.gz
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/EnvPairPotential/pair_log.txt
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/disulfides/centroid_CaCbCb_angle_score
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/sasa_scores/avge_datafile_score12prime_v1.txt
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/qsar/shape_histogram_data.js
Permission denied
Extracting in slot directory: minirosetta_database.zip
09:15:27 (3788): BOINC client no longer exists - exiting
09:15:27 (3788): timer handler: client dead, exiting
command: projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_windows_x86_64.exe @SETDB1_6BHE_fulldb_ucyRgD_5_5626.flags -nstruct 10000 -cpu_run_time 28800 -boinc:max_nstruct 20000 -checkpoint_interval 120 -mute all -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -boinc::cpu_run_timeout 36000 -run::rng mt19937
Extracting in slot directory: minirosetta_database.zip
Using database: database\
Starting watchdog...
Watchdog active.
======================================================
DONE :: 1 starting structures 27517.5 cpu seconds
This process generated 1 decoys from 1 attempts
======================================================
BOINC :: WS_max 1.10431e+09
BOINC :: Watchdog shutting down...
21:11:05 (10200): called boinc_finish(0)
</stderr_txt>
]]>
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