Task 1584199266
| Name | RosettaVS_SAVE_ALL_OUT_NOJRAN_SETDB1_6BHE_fulldb_IGNORE_THE_REST_ucyRgD_4_7725_2980831_3_0 |
| Workunit | 1409518946 |
| Created | 2 Oct 2024, 8:03:05 UTC |
| Sent | 2 Oct 2024, 8:36:15 UTC |
| Report deadline | 5 Oct 2024, 8:36:15 UTC |
| Received | 2 Oct 2024, 8:46:06 UTC |
| Server state | Over |
| Outcome | Computation error |
| Client state | Compute error |
| Exit status | 1 (0x00000001) Unknown error code |
| Computer ID | 5611308 |
| Run time | 4 min 15 sec |
| CPU time | 49 sec |
| Validate state | Invalid |
| Credit | 0.00 |
| Device peak FLOPS | 3.10 GFLOPS |
| Application version | Rosetta Beta v6.06 windows_x86_64 |
| Peak working set size | 43.99 MB |
| Peak swap size | 16.73 MB |
| Peak disk usage | 1.30 MB |
Stderr output
<core_client_version>7.14.3</core_client_version>
<![CDATA[
<message>
Incorrect function.
(0x1) - exit code 1 (0x1)</message>
<stderr_txt>
Permission denied
error: cannot create ./database/scoring/score_functions/facts/eff/LYX.params
Permission denied
error: cannot create ./database/scoring/score_functions/facts/eff/SUCK.params
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error: cannot create ./database/scoring/score_functions/facts/eff/PRO.params
Permission denied
error: cannot create ./database/scoring/score_functions/facts/eff/GDP.params
Permission denied
error: cannot create ./database/scoring/score_functions/facts/eff/GB_AA_PLACEHOLDER.params
Permission denied
error: cannot create ./database/scoring/score_functions/facts/eff/ALA.params
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error: cannot create ./database/scoring/score_functions/facts/eff/CYZ.params
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error: cannot create ./database/scoring/score_functions/facts/eff/GTP.params
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error: cannot create ./database/scoring/score_functions/facts/eff/VAL.params
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error: cannot create ./database/scoring/score_functions/facts/eff/GUA.params
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error: cannot create ./database/scoring/score_functions/facts/eff/THY.params
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error: cannot create ./database/scoring/score_functions/facts/eff/TYR.params
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error: cannot create ./database/scoring/score_functions/facts/eff/TP5.params
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error: cannot create ./database/scoring/score_functions/facts/eff/CYT.params
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error: cannot create ./database/scoring/score_functions/facts/eff/SER.params
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error: cannot create ./database/scoring/score_functions/facts/eff/GNP.params
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error: cannot create ./database/scoring/score_functions/facts/eff/FACTS_AA_PLACEHOLDER.params
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error: cannot create ./database/scoring/score_functions/facts/eff/ASP.params
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error: cannot create ./database/scoring/score_functions/facts/eff/ARG.params
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error: cannot create ./database/scoring/score_functions/facts/eff/08B.params
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error: cannot create ./database/scoring/score_functions/facts/eff/MET.params
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error: cannot create ./database/scoring/score_functions/facts/eff/ASN.params
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error: cannot create ./database/scoring/score_functions/facts/eff/THR.params
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error: cannot create ./database/scoring/score_functions/facts/eff/VRT.params
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error: cannot create ./database/scoring/score_functions/facts/eff/GLU.params
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error: cannot create ./database/scoring/score_functions/facts/eff/TP3.params
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error: cannot create ./database/scoring/score_functions/facts/eff/HIS.params
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error: cannot create ./database/scoring/score_functions/facts/ADE.params
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error: cannot create ./database/scoring/score_functions/facts/GLY.params
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error: cannot create ./database/scoring/score_functions/facts/PHE.params
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error: cannot create ./database/scoring/score_functions/facts/LYS.params
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error: cannot create ./database/scoring/score_functions/facts/CYS.params
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error: cannot create ./database/scoring/score_functions/facts/CYD.params
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error: cannot create ./database/scoring/score_functions/facts/08A.params
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error: cannot create ./database/scoring/score_functions/facts/GLN.params
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error: cannot create ./database/scoring/score_functions/facts/GLY_org.params
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error: cannot create ./database/scoring/score_functions/facts/LEU.params
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error: cannot create ./database/scoring/score_functions/facts/CYX.params
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error: cannot create ./database/scoring/score_functions/facts/LYX.params
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error: cannot create ./database/scoring/score_functions/facts/PRO.params
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error: cannot create ./database/scoring/score_functions/facts/GLU_mod.params
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error: cannot create ./database/scoring/score_functions/facts/GDP.params
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error: cannot create ./database/scoring/score_functions/facts/ALA.params
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error: cannot create ./database/scoring/score_functions/facts/CYZ.params
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error: cannot create ./database/scoring/score_functions/facts/modified/HIS.params
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error: cannot create ./database/scoring/score_functions/facts/modified/GLU.params
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error: cannot create ./database/scoring/score_functions/facts/modified/TP3.params
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error: cannot create ./database/scoring/score_functions/facts/modified/VRT.params
Permission denied
error: cannot create ./database/scoring/score_functions/facts/modified/THR.params
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error: cannot create ./database/scoring/score_functions/facts/modified/ASN.params
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error: cannot create ./database/scoring/score_functions/facts/modified/GB_AA_PLACEHOLDER.params
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error: cannot create ./database/scoring/score_functions/facts/modified/08B.params
Permission denied
error: cannot create ./database/scoring/score_functions/facts/modified/MET.params
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error: cannot create ./database/scoring/score_functions/facts/modified/ARG.params
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error: cannot create ./database/scoring/score_functions/facts/modified/ASP.params
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error: cannot create ./database/scoring/score_functions/facts/modified/GNP.params
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error: cannot create ./database/scoring/score_functions/facts/modified/SER.params
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error: cannot create ./database/scoring/score_functions/facts/modified/CYT.params
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error: cannot create ./database/scoring/score_functions/facts/modified/HIS_D.params
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error: cannot create ./database/scoring/score_functions/facts/modified/TP5.params
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error: cannot create ./database/scoring/score_functions/facts/modified/TYR.params
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error: cannot create ./database/scoring/score_functions/facts/modified/THY.params
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error: cannot create ./database/scoring/score_functions/facts/modified/GUA.params
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error: cannot create ./database/scoring/score_functions/facts/modified/VAL.params
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error: cannot create ./database/scoring/score_functions/facts/modified/GTP.params
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error: cannot create ./database/scoring/score_functions/facts/modified/ALA.params
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error: cannot create ./database/scoring/score_functions/facts/modified/CYZ.params
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error: cannot create ./database/scoring/score_functions/facts/modified/GLU_mod.params
Permission denied
error: cannot create ./database/scoring/score_functions/facts/modified/GDP.params
Permission denied
error: cannot create ./database/scoring/score_functions/facts/modified/PRO.params
Permission denied
error: cannot create ./database/scoring/score_functions/facts/modified/VRT1.params
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error: cannot create ./database/scoring/score_functions/facts/modified/LEU.params
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error: cannot create ./database/scoring/score_functions/facts/modified/CYX.params
Permission denied
error: cannot create ./database/scoring/score_functions/facts/modified/LYX.params
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error: cannot create ./database/scoring/score_functions/facts/modified/GLN.params
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error: cannot create ./database/scoring/score_functions/facts/modified/08A.params
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error: cannot create ./database/scoring/score_functions/facts/modified/CYD.params
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error: cannot create ./database/scoring/score_functions/facts/modified/LYS.params
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error: cannot create ./database/scoring/score_functions/facts/modified/CYS.params
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error: cannot create ./database/scoring/score_functions/facts/modified/PHE.params
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error: cannot create ./database/scoring/score_functions/facts/modified/ADE.params
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error: cannot create ./database/scoring/score_functions/facts/modified/GLY.params
Permission denied
error: cannot create ./database/scoring/score_functions/facts/modified/SUCK.params
Permission denied
error: cannot create ./database/scoring/score_functions/facts/modified/ILE.params
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error: cannot create ./database/scoring/score_functions/facts/modified/TRP.params
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error: cannot create ./database/scoring/score_functions/facts/GTP.params
Permission denied
error: cannot create ./database/scoring/score_functions/facts/VRT1.params
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error: cannot create ./database/scoring/score_functions/facts/VAL.params
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error: cannot create ./database/scoring/score_functions/facts/GUA.params
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error: cannot create ./database/scoring/score_functions/MembranePotential/mem_pair_log.txt
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error: cannot create ./database/scoring/score_functions/MembranePotential/elazar_spline_mp_span_ins_fa.txt
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error: cannot create ./database/scoring/score_functions/MembranePotential/ELazaridis_polynom_table.txt
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error: cannot create ./database/scoring/score_functions/MembranePotential/AsymEZ_CG.txt
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error: cannot create ./database/scoring/score_functions/MembranePotential/spline_test_cen.txt
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error: cannot create ./database/scoring/score_functions/MembranePotential/spline_test_fa.txt
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error: cannot create ./database/scoring/score_functions/MembranePotential/AsymEZ_CB_Derivs.txt
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error: cannot create ./database/scoring/score_functions/MembranePotential/mem_env_log.txt
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error: cannot create ./database/scoring/score_functions/MembranePotential/memcbeta_den.txt
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error: cannot create ./database/scoring/score_functions/MembranePotential/ELazaridis_cen_polynom_table.txt
Permission denied
error: cannot create ./database/scoring/score_functions/MembranePotential/AsymEZ_CG_Derivs.txt
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error: cannot create ./database/scoring/score_functions/MembranePotential/CEN10_Menv_smooth_log.txt
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error: cannot create ./database/scoring/score_functions/MembranePotential/CEN6_mem_env_log.txt
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error: cannot create ./database/scoring/score_functions/MembranePotential/CEN10_mem_env_log.txt
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error: cannot create ./database/scoring/score_functions/MembranePotential/AsymEZ_CB.txt
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error: cannot create ./database/scoring/score_functions/mhc_epitope/refresh_iedb_database.sh
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error: cannot create ./database/scoring/score_functions/mhc_epitope/iedb_data.db
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error: cannot create ./database/scoring/score_functions/mhc_epitope/Distribution of IEDB-derived data with Rosetta.pdf
Permission denied
error: cannot create ./database/scoring/score_functions/mhc_epitope/Distribution of Propred matrices with Rosetta.pdf
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error: cannot create ./database/scoring/score_functions/mhc_epitope/iedb_data.info
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error: cannot create ./database/scoring/score_functions/mhc_epitope/iedb_data.mhc
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error: cannot create ./database/scoring/score_functions/mhc_epitope/propred8_5.mhc
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error: cannot create ./database/scoring/score_functions/mhc_epitope/propred8.txt
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error: cannot create ./database/scoring/score_functions/SecondaryStructurePotential/rsigma_dot.txt
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error: cannot create ./database/scoring/score_functions/SecondaryStructurePotential/phi.theta.36.HS.resmooth
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error: cannot create ./database/scoring/score_functions/SecondaryStructurePotential/phi.theta.36.SS.resmooth
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error: cannot create ./database/scoring/score_functions/NV/neighbor_vector_score.histogram
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error: cannot create ./database/scoring/score_functions/saxs/ASP__CEN.ff
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error: cannot create ./database/scoring/score_functions/saxs/GLU__CEN.ff
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error: cannot create ./database/scoring/score_functions/saxs/ff-rosetta-cen.cfg
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error: cannot create ./database/scoring/score_functions/saxs/LEU__CEN.ff
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error: cannot create ./database/scoring/score_functions/saxs/always_one.ff
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error: cannot create ./database/scoring/score_functions/saxs/CYS__CEN.ff
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error: cannot create ./database/scoring/score_functions/saxs/H.ff
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error: cannot create ./database/scoring/score_functions/saxs/HIS__CEN.ff
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error: cannot create ./database/scoring/score_functions/saxs/LYS__CEN.ff
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error: cannot create ./database/scoring/score_functions/saxs/MET__CEN.ff
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error: cannot create ./database/scoring/score_functions/saxs/VAL__CEN.ff
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error: cannot create ./database/scoring/score_functions/saxs/O.ff
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error: cannot create ./database/scoring/score_functions/saxs/PRO__CEN.ff
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error: cannot create ./database/scoring/score_functions/saxs/SER__CEN.ff
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error: cannot create ./database/scoring/score_functions/saxs/PHE__CEN.ff
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error: cannot create ./database/scoring/score_functions/saxs/ILE__CEN.ff
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error: cannot create ./database/scoring/score_functions/saxs/N.ff
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error: cannot create ./database/scoring/score_functions/saxs/GLN__CEN.ff
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error: cannot create ./database/scoring/score_functions/saxs/ff-rosetta-fa.cfg
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error: cannot create ./database/scoring/score_functions/saxs/ASN__CEN.ff
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error: cannot create ./database/scoring/score_functions/saxs/TRP__CEN.ff
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error: cannot create ./database/scoring/score_functions/saxs/ff-rosetta.cfg
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error: cannot create ./database/scoring/score_functions/saxs/ARG__CEN.ff
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error: cannot create ./database/scoring/score_functions/saxs/THR__CEN.ff
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error: cannot create ./database/scoring/score_functions/saxs/TYR__CEN.ff
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error: cannot create ./database/scoring/score_functions/saxs/C.ff
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error: cannot create ./database/scoring/score_functions/generic_potential/generic_bonded.aamerge.txt
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error: cannot create ./database/scoring/score_functions/generic_potential/generic_bonded.round6p.txt
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error: cannot create ./database/scoring/score_functions/generic_potential/torsion_distribution.round6p.gz.v1.txt
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error: cannot create ./database/scoring/score_functions/PairEPotential/pdb_pair_stats_fine
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error: cannot create ./database/scoring/score_functions/split_unfolded/rosetta_database_talaris2013_boltz
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error: cannot create ./database/scoring/score_functions/split_unfolded/ele_database_mm_std_boltz
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error: cannot create ./database/scoring/score_functions/split_unfolded/unique_database_talaris2013_mode
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error: cannot create ./database/scoring/score_functions/split_unfolded/ele_database_talaris2013_boltz
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error: cannot create ./database/scoring/score_functions/split_unfolded/rosetta_database_talaris2013_mean
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error: cannot create ./database/scoring/score_functions/split_unfolded/mm_database_mm_std_mode
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error: cannot create ./database/scoring/score_functions/split_unfolded/rosetta_database_mm_std_median
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error: cannot create ./database/scoring/score_functions/split_unfolded/unique_database_mm_std_boltz
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error: cannot create ./database/scoring/score_functions/split_unfolded/ele_database_mm_std_median
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error: cannot create ./database/scoring/score_functions/split_unfolded/rosetta_database_talaris2013_mode
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error: cannot create ./database/scoring/score_functions/split_unfolded/mm_database_mm_std_mean
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error: cannot create ./database/scoring/score_functions/split_unfolded/unique_database_talaris2013_boltz
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error: cannot create ./database/scoring/score_functions/split_unfolded/unique_database_talaris2013_mean
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error: cannot create ./database/scoring/score_functions/split_unfolded/rosetta_database_mm_std_boltz
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error: cannot create ./database/scoring/score_functions/split_unfolded/mm_database_talaris2013_mean
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error: cannot create ./database/scoring/score_functions/split_unfolded/unique_database_mm_std_mode
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error: cannot create ./database/scoring/score_functions/split_unfolded/pdb_database_talaris2013_median
Permission denied
error: cannot create ./database/scoring/score_functions/split_unfolded/split_unfolded_one_body_talaris2013
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error: cannot create ./database/scoring/score_functions/split_unfolded/mm_database_talaris2013_mode
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error: cannot create ./database/scoring/score_functions/split_unfolded/unique_database_mm_std_mean
Permission denied
error: cannot create ./database/scoring/score_functions/split_unfolded/ele_database_talaris2013_median
Permission denied
error: cannot create ./database/scoring/score_functions/split_unfolded/rosetta_database_talaris2013_median
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error: cannot create ./database/scoring/score_functions/split_unfolded/pdb_database_talaris2013_boltz
Permission denied
error: cannot create ./database/scoring/score_functions/split_unfolded/unique_database_mm_std_median
Permission denied
error: cannot create ./database/scoring/score_functions/split_unfolded/ele_database_mm_std_mean
Permission denied
error: cannot create ./database/scoring/score_functions/split_unfolded/unique_database_talaris2013_median
Permission denied
error: cannot create ./database/scoring/score_functions/split_unfolded/rosetta_database_mm_std_mean
Permission denied
error: cannot create ./database/scoring/score_functions/split_unfolded/ele_database_talaris2013_mode
Permission denied
error: cannot create ./database/scoring/score_functions/split_unfolded/mm_database_mm_std_median
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error: cannot create ./database/scoring/score_functions/split_unfolded/ele_database_talaris2013_mean
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error: cannot create ./database/scoring/score_functions/split_unfolded/rosetta_database_mm_std_mode
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error: cannot create ./database/scoring/score_functions/split_unfolded/split_unfolded_one_body_mm_std
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error: cannot create ./database/scoring/score_functions/split_unfolded/ele_database_mm_std_mode
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error: cannot create ./database/scoring/score_functions/split_unfolded/mm_database_mm_std_boltz
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error: cannot create ./database/scoring/score_functions/split_unfolded/pdb_database_talaris2013_mode
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error: cannot create ./database/scoring/score_functions/split_unfolded/split_unfolded_two_body_default
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error: cannot create ./database/scoring/score_functions/split_unfolded/mm_database_talaris2013_median
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error: cannot create ./database/scoring/score_functions/split_unfolded/mm_database_talaris2013_boltz
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error: cannot create ./database/scoring/score_functions/split_unfolded/pdb_database_talaris2013_mean
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error: cannot create ./database/scoring/score_functions/lipid_orientation/chol_o_mem_z_smooth_energies.dat
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error: cannot create ./database/scoring/score_functions/lipid_orientation/chol_com_mem_z_smooth_energies.dat
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error: cannot create ./database/scoring/score_functions/lipid_orientation/chol_c25_mem_z_smooth_energies.dat
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error: cannot create ./database/scoring/score_functions/netcharge/net_zero.charge
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error: cannot create ./database/scoring/score_functions/netcharge/negative_one.charge
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error: cannot create ./database/scoring/score_functions/omega/notes_on_data.txt
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error: cannot create ./database/scoring/score_functions/omega/omega_ppdep.all.txt
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error: cannot create ./database/scoring/score_functions/omega/omega_ppdep.prepro.txt
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error: cannot create ./database/scoring/score_functions/omega/omega_ppdep.valile.txt
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error: cannot create ./database/scoring/score_functions/omega/omega_ppdep.pro.txt
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error: cannot create ./database/scoring/score_functions/omega/omega_ppdep.gly.txt
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error: cannot create ./database/scoring/score_functions/unfolded/unfolded_state_residue_energies_mm_std
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error: cannot create ./database/scoring/score_functions/unfolded/unfolded_state_residue_energies_score12
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error: cannot create ./database/scoring/score_functions/unfolded/unfolded_state_residue_energies_rna
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error: cannot create ./database/scoring/score_functions/elec_group_def.dat
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error: cannot create ./database/scoring/score_functions/hbonds/OLF_params_4/HBEval.csv
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error: cannot create ./database/scoring/score_functions/hbonds/OLF_params_4/HBSeqSep.csv
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error: cannot create ./database/scoring/score_functions/hbonds/OLF_params_4/HBDonChemType.csv
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error: cannot create ./database/scoring/score_functions/hbonds/OLF_params_4/HBAccChemType.csv
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error: cannot create ./database/scoring/score_functions/hbonds/OLF_params_4/HBAccHybridization.csv
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error: cannot create ./database/scoring/score_functions/hbonds/OLF_params_4/params.db3
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error: cannot create ./database/scoring/score_functions/hbonds/OLF_params_4/HBondWeightType.csv
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error: cannot create ./database/scoring/score_functions/hbonds/OLF_params_4/schema.sql
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error: cannot create ./database/scoring/score_functions/hbonds/OLF_params_4/HybridizationType.csv
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error: cannot create ./database/scoring/score_functions/hbonds/OLF_params_4/HBPoly1D.csv
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error: cannot create ./database/scoring/score_functions/hbonds/OLF_params_4/HBFadeIntervals.csv
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error: cannot create ./database/scoring/score_functions/hbonds/extended_BAH_params/HBAccHybridization.csv
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error: cannot create ./database/scoring/score_functions/hbonds/extended_BAH_params/HBEval.csv
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error: cannot create ./database/scoring/score_functions/hbonds/extended_BAH_params/HBondWeightType.csv
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error: cannot create ./database/scoring/score_functions/hbonds/extended_BAH_params/HBFadeIntervals.csv
Permission denied
error: cannot create ./database/scoring/score_functions/hbonds/extended_BAH_params/HybridizationType.csv
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error: cannot create ./database/scoring/score_functions/hbonds/extended_BAH_params/HBPoly1D.csv
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error: cannot create ./database/scoring/score_functions/hbonds/extended_BAH_params/HBSeqSep.csv
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error: cannot create ./database/scoring/score_functions/hbonds/extended_BAH_params/schema.sql
Permission denied
error: cannot create ./database/scoring/score_functions/hbonds/extended_BAH_params/HBAccChemType.csv
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error: cannot create ./database/scoring/score_functions/hbonds/extended_BAH_params/HBDonChemType.csv
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error: cannot create ./database/scoring/score_functions/hbonds/correct_params/schema.sql
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error: cannot create ./database/scoring/score_functions/hbonds/correct_params/HybridizationType.csv
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error: cannot create ./database/scoring/score_functions/hbonds/correct_params/HBPoly1D.csv
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error: cannot create ./database/scoring/score_functions/hbonds/correct_params/HBFadeIntervals.csv
Permission denied
error: cannot create ./database/scoring/score_functions/hbonds/correct_params/HBondWeightType.csv
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error: cannot create ./database/scoring/score_functions/hbonds/correct_params/HBEval.csv
Permission denied
error: cannot create ./database/scoring/score_functions/hbonds/correct_params/HBDonChemType.csv
Permission denied
error: cannot create ./database/scoring/score_functions/hbonds/correct_params/HBAccHybridization.csv
Permission denied
error: cannot create ./database/scoring/score_functions/hbonds/correct_params/HBAccChemType.csv
Permission denied
error: cannot create ./database/scoring/score_functions/hbonds/correct_params/HBSeqSep.csv
Permission denied
error: cannot create ./database/scoring/score_functions/hbonds/helix_hb_06_2009/HBAccHybridization.csv
Permission denied
error: cannot create ./database/scoring/score_functions/hbonds/helix_hb_06_2009/HBSeqSep.csv
Permission denied
error: cannot create ./database/scoring/score_functions/hbonds/helix_hb_06_2009/HybridizationType.csv
Permission denied
error: cannot create ./database/scoring/score_functions/hbonds/helix_hb_06_2009/schema.sql
Permission denied
error: cannot create ./database/scoring/score_functions/hbonds/helix_hb_06_2009/HBondWeightType.csv
Permission denied
error: cannot create ./database/scoring/score_functions/hbonds/helix_hb_06_2009/HBDonChemType.csv
Permission denied
error: cannot create ./database/scoring/score_functions/hbonds/helix_hb_06_2009/HBPoly1D.csv
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error: cannot create ./database/scoring/score_functions/hbonds/helix_hb_06_2009/HBEval.csv
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error: cannot create ./database/scoring/score_functions/hbonds/helix_hb_06_2009/HBAccChemType.csv
Permission denied
error: cannot create ./database/scoring/score_functions/hbonds/helix_hb_06_2009/HBFadeIntervals.csv
Permission denied
error: cannot create ./database/scoring/score_functions/hbonds/correct_no_lr_params/HBAccChemType.csv
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Using database: database\
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Starting watchdog...
Watchdog active.
ERROR: Unable to open file: database\chemical/residue_type_sets/fa_standard/residue_types.txt
ERROR:: Exit from: src/core/chemical/GlobalResidueTypeSet.cc line: 147
BOINC:: Error reading and gzipping output datafile: default.out
02:43:11 (88832): called boinc_finish(1)
</stderr_txt>
]]>
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