Task 1584031241
| Name | RosettaVS_SAVE_ALL_OUT_NOJRAN_SETDB1_6BHE_fulldb_IGNORE_THE_REST_ucyRgD_8_7785_2980835_2_0 |
| Workunit | 1409371739 |
| Created | 1 Oct 2024, 14:42:48 UTC |
| Sent | 1 Oct 2024, 15:10:32 UTC |
| Report deadline | 4 Oct 2024, 15:10:32 UTC |
| Received | 1 Oct 2024, 23:28:19 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 6221101 |
| Run time | 7 hours 1 min 9 sec |
| CPU time | 6 hours 16 min 23 sec |
| Validate state | Valid |
| Credit | 218.00 |
| Device peak FLOPS | 3.73 GFLOPS |
| Application version | Rosetta Beta v6.06 windows_x86_64 |
| Peak working set size | 1,868.80 MB |
| Peak swap size | 1,768.23 MB |
| Peak disk usage | 1,182.53 MB |
Stderr output
<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
command: projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_windows_x86_64.exe @SETDB1_6BHE_fulldb_ucyRgD_8_7785.flags -nstruct 10000 -cpu_run_time 28800 -boinc:max_nstruct 20000 -checkpoint_interval 120 -mute all -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -boinc::cpu_run_timeout 36000 -run::rng mt19937
Extracting in project directory: database_f5ae1de8e1.zip
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/sampling/orientations/orientgridall/data/c48u735777.grid.gz
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/sampling/vall.jul19.2011.torsions.gz
Permission denied
CreateFile() error 32 when trying set file time
CreateFile() error 2 when trying set file time
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/rotamer/cenrot_dunbrack.lib
Permission denied
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 2 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/rotamer/ncaa_rotlibs/ncaa_rotamer_libraries/n_methyl_amino_acid/ARG_Nmethylated.rotlib
Permission denied
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/rotamer/ncaa_rotlibs/ncaa_rotamer_libraries/oligourea/OU3_VAL.rotlib
Permission denied
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/rotamer/bbdep02.May.sortlib
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/rotamer/beta_nov2016/asn.bbdep.rotamers.lib.gz
Permission denied
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/rotamer/beta_nov2016/glu.bbdep.rotamers.lib.gz
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/rotamer/beta_nov2016/lys.bbdep.rotamers.lib.gz
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/rotamer/beta_nov2016/leu.bbdep.rotamers.lib.gz
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/rotamer/beta_nov2016/asn.bbdep.densities.lib.gz
Permission denied
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/symmetry/cyclic/C54_Z.sym
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/symmetry/cyclic/C59_Z.sym
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/symmetry/cyclic/C89_Z.sym
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/symmetry/cyclic/C55_Z.sym
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/symmetry/cyclic/C61_Z.sym
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/symmetry/cyclic/C60_Z.sym
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/symmetry/cyclic/C34_Z.sym
Permission denied
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/external/svm_models/ss_prediction/ABEGO_rd2_model
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/external/svm_models/ss_prediction/HLE_rd1_model
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/external/svm_models/ss_prediction/HLE_rd2_model
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_talaris/residue_types/l-ncaa/2-amino-3-methylamino-propanoic_acid.params
No such file or directory
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_talaris/residue_types/l-ncaa/5-fluoro-tryptophan.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_talaris/residue_types/l-ncaa/alpha-methyl-tryptophan.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_talaris/residue_types/l-ncaa/S56.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_talaris/residue_types/gamma-peptide/4D3L2L_GALA.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_talaris/residue_types/gamma-peptide/3L2L_GALA.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_talaris/residue_types/gamma-peptide/4L2L_GALA.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_talaris/residue_types/gamma-peptide/G4LEU.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_talaris/residue_types/peptoids/203.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_talaris/residue_types/peptoids/116.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_talaris/residue_types/peptoids/004.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_talaris/residue_types/peptoids/012.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_talaris/residue_types/peptoids/408.params
No such file or directory
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_talaris/residue_types/peptoids/009.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_talaris/residue_types/peptoids/503.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_talaris/residue_types/peptoids/006.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_talaris/residue_types/peptoids/621.params
No such file or directory
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_talaris/residue_types/peptoids/308.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_talaris/residue_types/peptoids/407.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_talaris/residue_types/peptoids/305.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_talaris/residue_types/peptoids/411.params
No such file or directory
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_talaris/residue_types/peptoids/010.params
Permission denied
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/glucoses/to4-beta-L-Glcp.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/glucoses/to3-alpha-L-Olif.params
No such file or directory
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/glucoses/to3-beta-L-Glcf.params
No such file or directory
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/polyaramids/LAE.params
Permission denied
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/polyaramids/KLM.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/polyaramids/QAR.params
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/l-caa/ILE.params
Permission denied
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/pdb_components/components.0.cif
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/pdb_components/components.7.cif
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/pdb_components/components.9.cif
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/atom_type_sets/fa_standard_talaris/extras/gen_kirkwood_params.txt
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/atom_type_sets/fa_standard_talaris/atom_properties.txt
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/atom_type_sets/coarse_two_bead/atom_properties.txt
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/atom_type_sets/coarse_rna/meta.txt
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/atom_type_sets/fa_standard/extras/reduce_sasa_radii.txt
Permission denied
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/virtual_enzymes/kinases/h_sapiens/MSK1
Permission denied
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/virtual_enzymes/kinases/h_sapiens/CaMK4
No such file or directory
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/weights/ligandprime.wts
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/weights/score12_no_hb_env_dep.wts
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/weights/gauss1.wts
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/weights/beta_nov15_cart.wts
Permission denied
error: cannot create C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/weights/score12minpack.wts
Permission denied
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/weights/trRosetta_cen1.wts
Permission denied
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/weights/interface.wts
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/weights/gauss.wts
No such file or directory
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/weights/cen_std_smooth.wts
Permission denied
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/weights/stepwise/rna/rna_res_level_energy7beta.wts
Permission denied
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 2 when trying set file time
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/weights/latest_greatest.wts
Permission denied
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/P_AA_pp/shapovalov/2.5deg/kappa131/a20.prop
Permission denied
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/split_unfolded/rosetta_database_talaris2013_median
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/split_unfolded/unique_database_mm_std_median
No such file or directory
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/split_unfolded/split_unfolded_two_body_default
Permission denied
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/hbonds/OLF_params_4/schema.sql
Permission denied
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
CreateFile() error 32 when trying set file time
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/pointwater/norm_trunc6/E_GLU_OE2_CD.dat
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/aa_composition/sample_composition.comp
Permission denied
error: cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/aa_composition/ten_percent_aromatic.comp
Permission denied
Extracting in slot directory: minirosetta_database.zip
Using database: database\
Starting watchdog...
Watchdog active.
======================================================
DONE :: 3 starting structures 22583.9 cpu seconds
This process generated 3 decoys from 3 attempts
======================================================
BOINC :: WS_max 1.95909e+09
BOINC :: Watchdog shutting down...
18:27:14 (2468): called boinc_finish(0)
</stderr_txt>
]]>
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