Task 1583989663
| Name | RosettaVS_SAVE_ALL_OUT_NOJRAN_SETDB1_6BHE_fulldb_IGNORE_THE_REST_ucyRgD_6_6644_2980833_1_0 |
| Workunit | 1409334433 |
| Created | 1 Oct 2024, 10:31:31 UTC |
| Sent | 1 Oct 2024, 11:03:32 UTC |
| Report deadline | 4 Oct 2024, 11:03:32 UTC |
| Received | 1 Oct 2024, 11:33:09 UTC |
| Server state | Over |
| Outcome | Computation error |
| Client state | Compute error |
| Exit status | 1 (0x00000001) Unknown error code |
| Computer ID | 6281899 |
| Run time | 3 min 19 sec |
| CPU time | 19 sec |
| Validate state | Invalid |
| Credit | 0.00 |
| Device peak FLOPS | 4.59 GFLOPS |
| Application version | Rosetta Beta v6.06 windows_x86_64 |
| Peak working set size | 42.77 MB |
| Peak swap size | 16.60 MB |
| Peak disk usage | 1.12 MB |
Stderr output
<core_client_version>7.24.1</core_client_version>
<![CDATA[
<message>
Funci�n incorrecta.
(0x1) - exit code 1 (0x1)</message>
<stderr_txt>
Permission denied
error: cannot create ./database/scoring/score_functions/EnvPairPotential/pair_log.txt
Permission denied
error: cannot create ./database/scoring/score_functions/P_AA_SS_cen6/P_AA_SS.txt
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error: cannot create ./database/scoring/score_functions/P_AA_SS_cen6/P_AA_SS_cen6.txt
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error: cannot create ./database/scoring/score_functions/disulfides/fa_SS_distance_score
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error: cannot create ./database/scoring/score_functions/disulfides/centroid_backbone_dihedral_score
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error: cannot create ./database/scoring/score_functions/disulfides/centroid_CaCbCbCa_dihedral_score
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error: cannot create ./database/scoring/score_functions/disulfides/fa_CbSSCb_dihedral_score
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error: cannot create ./database/scoring/score_functions/disulfides/centroid_CaCbCb_angle_score
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error: cannot create ./database/scoring/score_functions/disulfides/fa_CaCbS_angle_score
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error: cannot create ./database/scoring/score_functions/disulfides/centroid_distance_score
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error: cannot create ./database/scoring/score_functions/custom_pair_distance/fa_custom_pair_distance
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error: cannot create ./database/scoring/score_functions/custom_pair_distance/pos_charge_repulsion
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error: cannot create ./database/scoring/score_functions/custom_pair_distance/neg_charge_repulsion
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error: cannot create ./database/scoring/score_functions/p_aa_ss.dat
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error: cannot create ./database/scoring/score_functions/sap_sasa_calib.dat
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error: cannot create ./database/scoring/score_functions/carbon_hbond/ch_o_bond_potential_near_min_yf.dat
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error: cannot create ./database/scoring/score_functions/carbon_hbond/ch_o_bond_potential_2.5Acutoff_smooth.dat
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error: cannot create ./database/scoring/score_functions/carbon_hbond/ch_o_bond_potential.dat
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error: cannot create ./database/scoring/score_functions/pointwater/norm_trunc6/E_ASN_2HD2_ND2.dat
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error: cannot create ./database/scoring/score_functions/pointwater/norm_trunc6/E_HIS_HD1_ND1.dat
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error: cannot create ./database/scoring/score_functions/pointwater/norm_trunc6/E_ARG_2HH1_NH1.dat
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error: cannot create ./database/scoring/score_functions/pointwater/norm_trunc6/E_LYS_2HZ_NZ.dat
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error: cannot create ./database/scoring/score_functions/pointwater/norm_trunc6/E_TYR_OH_CZ.dat
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error: cannot create ./database/scoring/score_functions/pointwater/norm_trunc6/E_GLN_2HE2_NE2.dat
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error: cannot create ./database/scoring/score_functions/pointwater/norm_trunc6/E_THR_OG1_CB.dat
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error: cannot create ./database/scoring/score_functions/pointwater/norm_trunc6/E_ARG_2HH2_NH2.dat
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error: cannot create ./database/scoring/score_functions/pointwater/norm_trunc6/E_ASP_OD1_CG.dat
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error: cannot create ./database/scoring/score_functions/pointwater/norm_trunc6/E_TRP_HE1_NE1.dat
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error: cannot create ./database/scoring/score_functions/pointwater/norm_trunc6/E_GLU_OE1_CD.dat
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error: cannot create ./database/scoring/score_functions/pointwater/norm_trunc6/E_LYS_3HZ_NZ.dat
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error: cannot create ./database/scoring/score_functions/pointwater/norm_trunc6/E_GLN_OE1_CG.dat
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error: cannot create ./database/scoring/score_functions/pointwater/norm_trunc6/E_HIS_HE2_NE2.dat
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error: cannot create ./database/scoring/score_functions/pointwater/norm_trunc6/E_GLU_OE2_CD.dat
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error: cannot create ./database/scoring/score_functions/pointwater/norm_trunc6/E_ASP_OD2_CG.dat
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error: cannot create ./database/scoring/score_functions/pointwater/norm_trunc6/E_LIG_ACC_SP3.dat
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error: cannot create ./database/scoring/score_functions/pointwater/norm_trunc6/E_ASN_1HD2_ND2.dat
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error: cannot create ./database/scoring/score_functions/pointwater/norm_trunc6/E_ALL_O_C.dat
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error: cannot create ./database/scoring/score_functions/pointwater/norm_trunc6/E_ALL_H_N.dat
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error: cannot create ./database/scoring/score_functions/pointwater/norm_trunc6/E_ARG_1HH1_NH1.dat
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error: cannot create ./database/scoring/score_functions/pointwater/norm_trunc6/E_LIG_DON.dat
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error: cannot create ./database/scoring/score_functions/pointwater/norm_trunc6/E_ARG_HE_NE.dat
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error: cannot create ./database/scoring/score_functions/pointwater/norm_trunc6/E_HIS_ND1_XXX.dat
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error: cannot create ./database/scoring/score_functions/pointwater/norm_trunc6/E_LYS_1HZ_NZ.dat
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error: cannot create ./database/scoring/score_functions/pointwater/norm_trunc6/E_ASN_OD1_CG.dat
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error: cannot create ./database/scoring/score_functions/pointwater/norm_trunc6/E_GLN_1HE2_NE2.dat
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error: cannot create ./database/scoring/score_functions/pointwater/norm_trunc6/E_LIG_ACC_SP2.dat
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error: cannot create ./database/scoring/score_functions/pointwater/norm_trunc6/E_ARG_1HH2_NH2.dat
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error: cannot create ./database/scoring/score_functions/pointwater/norm_trunc6/E_SER_OG_CB.dat
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error: cannot create ./database/scoring/score_functions/aa_composition/sample_composition.comp
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error: cannot create ./database/scoring/score_functions/aa_composition/exactly_one_trp.comp
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error: cannot create ./database/scoring/score_functions/aa_composition/twenty_percent_pro.comp
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error: cannot create ./database/scoring/score_functions/aa_composition/exactly_one_ala.comp
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error: cannot create ./database/scoring/score_functions/aa_composition/two_aromatics.comp
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error: cannot create ./database/scoring/score_functions/aa_composition/ten_percent_aromatic.comp
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error: cannot create ./database/scoring/score_functions/aa_repeat_energy/default_repeat_penalty_table.rpt_pen
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error: cannot create ./database/scoring/score_functions/SurfacePotential/hpatch_score.txt
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error: cannot create ./database/scoring/score_functions/SurfacePotential/surface_score.txt
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error: cannot create ./database/scoring/score_functions/SurfacePotential/average_hASA_by_res_and_neighbor.txt
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error: cannot create ./database/scoring/sasa_scores/sasapack_datafile_v1.txt
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error: cannot create ./database/scoring/sasa_scores/avge_datafile_score12prime_v1.txt
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error: cannot create ./database/scoring/qsar/lj_table.txt
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error: cannot create ./database/scoring/qsar/weights/standard.wts
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error: cannot create ./database/scoring/qsar/shape_histogram_data.js
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error: cannot create ./database/scoring/qsar/hb_table.txt
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error: cannot create ./database/scoring/ProQ/ProQM_model.1.linear
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error: cannot create ./database/scoring/ProQ/ProQM_model.2.linear_retrained_for_rosetta
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error: cannot create ./database/scoring/ProQ/ProQ2_model.5.linear_retrained_for_rosetta
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error: cannot create ./database/scoring/ProQ/ProQ2_model.3.linear
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error: cannot create ./database/scoring/ProQ/ProQM_model.3.linear_retrained_for_rosetta
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error: cannot create ./database/scoring/ProQ/ProQ2_model.4.linear_retrained_for_rosetta
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error: cannot create ./database/scoring/ProQ/ProQM_model.3.linear
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error: cannot create ./database/scoring/ProQ/ProQ2_model.1.linear
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error: cannot create ./database/scoring/ProQ/ProQM_model.5.linear
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error: cannot create ./database/scoring/ProQ/ProQM_model.1.linear_retrained_for_rosetta
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error: cannot create ./database/scoring/ProQ/ProQ2_model.5.linear
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error: cannot create ./database/scoring/ProQ/ProQM_model.4.linear
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error: cannot create ./database/scoring/ProQ/ProQ2_model.4.linear
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error: cannot create ./database/scoring/ProQ/ProQ2_model.1.linear_retrained_for_rosetta
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error: cannot create ./database/scoring/ProQ/ProQ2_model.2.linear
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error: cannot create ./database/scoring/ProQ/ProQM_model.5.linear_retrained_for_rosetta
Permission denied
error: cannot create ./database/scoring/ProQ/ProQ2_model.2.linear_retrained_for_rosetta
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error: cannot create ./database/scoring/ProQ/ProQM_model.4.linear_retrained_for_rosetta
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error: cannot create ./database/scoring/ProQ/ProQ2_model.3.linear_retrained_for_rosetta
Permission denied
error: cannot create ./database/scoring/ProQ/ProQM_model.2.linear
Permission denied
error: cannot create ./database/scoring/AtomVDW/atom_vdw.txt
Permission denied
error: cannot create ./database/scoring/dna/bound_dna_dihedrals.txt
Permission denied
error: cannot create ./database/scoring/dna/dna_bs_bp.dat
Permission denied
error: cannot create ./database/scoring/dna/dna_env_pair.dat
Permission denied
warning: set times/attribs failed for ./database/virtual_enzymes/kinases/h_sapiens/
warning: set times/attribs failed for ./database/virtual_enzymes/kinases/
warning: set times/attribs failed for ./database/virtual_enzymes/glycosyltransferases/h_sapiens/
warning: set times/attribs failed for ./database/virtual_enzymes/glycosyltransferases/c_jejuni/
warning: set times/attribs failed for ./database/virtual_enzymes/glycosyltransferases/
warning: set times/attribs failed for ./database/virtual_enzymes/N-terminal_acetyltransferases/s_solfataricus/
warning: set times/attribs failed for ./database/virtual_enzymes/N-terminal_acetyltransferases/h_sapiens/
warning: set times/attribs failed for ./database/virtual_enzymes/N-terminal_acetyltransferases/
warning: set times/attribs failed for ./database/virtual_enzymes/DNA_methyltransferases/h_sapiens/
warning: set times/attribs failed for ./database/virtual_enzymes/DNA_methyltransferases/
warning: set times/attribs failed for ./database/virtual_enzymes/
warning: set times/attribs failed for ./database/utilities/
warning: set times/attribs failed for ./database/symmetry/cyclic/
warning: set times/attribs failed for ./database/symmetry/
warning: set times/attribs failed for ./database/sequence/tcell_ep_9mers/
warning: set times/attribs failed for ./database/sequence/substitution_matrix/
warning: set times/attribs failed for ./database/sequence/mhc_rank_svm_scores/
warning: set times/attribs failed for ./database/sequence/mhc_pssms/
warning: set times/attribs failed for ./database/sequence/
warning: set times/attribs failed for ./database/scoring/weights/stepwise/rna/deprecated/
warning: set times/attribs failed for ./database/scoring/weights/stepwise/rna/
warning: set times/attribs failed for ./database/scoring/weights/stepwise/protein/
warning: set times/attribs failed for ./database/scoring/weights/stepwise/
warning: set times/attribs failed for ./database/scoring/weights/rna/denovo/
warning: set times/attribs failed for ./database/scoring/weights/rna/
warning: set times/attribs failed for ./database/scoring/weights/
warning: set times/attribs failed for ./database/scoring/sucker/
warning: set times/attribs failed for ./database/scoring/score_functions/unfolded/
warning: set times/attribs failed for ./database/scoring/score_functions/split_unfolded/
warning: set times/attribs failed for ./database/scoring/score_functions/sc/
warning: set times/attribs failed for ./database/scoring/score_functions/saxs/
warning: set times/attribs failed for ./database/scoring/score_functions/rama/shapovalov/kappa75/
warning: set times/attribs failed for ./database/scoring/score_functions/rama/shapovalov/kappa50/
warning: set times/attribs failed for ./database/scoring/score_functions/rama/shapovalov/kappa37.5/
warning: set times/attribs failed for ./database/scoring/score_functions/rama/shapovalov/kappa25/
warning: set times/attribs failed for ./database/scoring/score_functions/rama/shapovalov/
warning: set times/attribs failed for ./database/scoring/score_functions/rama/oligourea/
warning: set times/attribs failed for ./database/scoring/score_functions/rama/n_methyl/
warning: set times/attribs failed for ./database/scoring/score_functions/rama/flat/
warning: set times/attribs failed for ./database/scoring/score_functions/rama/fd_beta_nov2016/
warning: set times/attribs failed for ./database/scoring/score_functions/rama/fd/
warning: set times/attribs failed for ./database/scoring/score_functions/rama/beta_aa/
warning: set times/attribs failed for ./database/scoring/score_functions/rama/aramid/
warning: set times/attribs failed for ./database/scoring/score_functions/rama/alpha_ncaa/
warning: set times/attribs failed for ./database/scoring/score_functions/rama/
warning: set times/attribs failed for ./database/scoring/score_functions/pointwater/norm_trunc6/
warning: set times/attribs failed for ./database/scoring/score_functions/pointwater/
warning: set times/attribs failed for ./database/scoring/score_functions/orbitals/
warning: set times/attribs failed for ./database/scoring/score_functions/omega/
warning: set times/attribs failed for ./database/scoring/score_functions/netcharge/
warning: set times/attribs failed for ./database/scoring/score_functions/mhc_epitope/
warning: set times/attribs failed for ./database/scoring/score_functions/lipid_orientation/
warning: set times/attribs failed for ./database/scoring/score_functions/hbonds/sp2_params/
warning: set times/attribs failed for ./database/scoring/score_functions/hbonds/sp2_elec_params/
warning: set times/attribs failed for ./database/scoring/score_functions/hbonds/score12_params/
warning: set times/attribs failed for ./database/scoring/score_functions/hbonds/ref2015_params/
warning: set times/attribs failed for ./database/scoring/score_functions/hbonds/no_lr_params/
warning: set times/attribs failed for ./database/scoring/score_functions/hbonds/newOH_params/
warning: set times/attribs failed for ./database/scoring/score_functions/hbonds/newCHI_params/
warning: set times/attribs failed for ./database/scoring/score_functions/hbonds/helix_hb_06_2009/
warning: set times/attribs failed for ./database/scoring/score_functions/hbonds/extended_BAH_params/
warning: set times/attribs failed for ./database/scoring/score_functions/hbonds/experimental_params/
warning: set times/attribs failed for ./database/scoring/score_functions/hbonds/correct_params/
warning: set times/attribs failed for ./database/scoring/score_functions/hbonds/correct_no_lr_params/
warning: set times/attribs failed for ./database/scoring/score_functions/hbonds/OLF_params_4/
warning: set times/attribs failed for ./database/scoring/score_functions/hbonds/His_Phil_fix/
warning: set times/attribs failed for ./database/scoring/score_functions/hbonds/BBasSC_params/
warning: set times/attribs failed for ./database/scoring/score_functions/hbonds/
warning: set times/attribs failed for ./database/scoring/score_functions/goap/
warning: set times/attribs failed for ./database/scoring/score_functions/generic_potential/
warning: set times/attribs failed for ./database/scoring/score_functions/facts/test/
warning: set times/attribs failed for ./database/scoring/score_functions/facts/modified/
warning: set times/attribs failed for ./database/scoring/score_functions/facts/eff/
warning: set times/attribs failed for ./database/scoring/score_functions/facts/
warning: set times/attribs failed for ./database/scoring/score_functions/etable/
warning: set times/attribs failed for ./database/scoring/score_functions/envsmooth/
warning: set times/attribs failed for ./database/scoring/score_functions/disulfides/
warning: set times/attribs failed for ./database/scoring/score_functions/custom_pair_distance/
warning: set times/attribs failed for ./database/scoring/score_functions/centroid_smooth/
warning: set times/attribs failed for ./database/scoring/score_functions/carbon_hbond/
warning: set times/attribs failed for ./database/scoring/score_functions/carbohydrates/
warning: set times/attribs failed for ./database/scoring/score_functions/bondlength_bondangle_talaris/
warning: set times/attribs failed for ./database/scoring/score_functions/bondlength_bondangle_beta/
warning: set times/attribs failed for ./database/scoring/score_functions/bondlength_bondangle/
warning: set times/attribs failed for ./database/scoring/score_functions/aa_repeat_energy/
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warning: set times/attribs failed for ./database/scoring/score_functions/PairEPotential/
warning: set times/attribs failed for ./database/scoring/score_functions/P_AA_pp/shapovalov/2.5deg/kappa50/
warning: set times/attribs failed for ./database/scoring/score_functions/P_AA_pp/shapovalov/2.5deg/kappa131/
warning: set times/attribs failed for ./database/scoring/score_functions/P_AA_pp/shapovalov/2.5deg/
warning: set times/attribs failed for ./database/scoring/score_functions/P_AA_pp/shapovalov/10deg/kappa50/
warning: set times/attribs failed for ./database/scoring/score_functions/P_AA_pp/shapovalov/10deg/kappa131/
warning: set times/attribs failed for ./database/scoring/score_functions/P_AA_pp/shapovalov/10deg/
warning: set times/attribs failed for ./database/scoring/score_functions/P_AA_pp/shapovalov/
warning: set times/attribs failed for ./database/scoring/score_functions/P_AA_pp/
warning: set times/attribs failed for ./database/scoring/score_functions/P_AA_SS_cen6/
warning: set times/attribs failed for ./database/scoring/score_functions/NV/
warning: set times/attribs failed for ./database/scoring/score_functions/MembranePotential/
warning: set times/attribs failed for ./database/scoring/score_functions/InterchainPotential/
warning: set times/attribs failed for ./database/scoring/score_functions/EnvPairPotential/
warning: set times/attribs failed for ./database/scoring/score_functions/DDPscore/
warning: set times/attribs failed for ./database/scoring/score_functions/
warning: set times/attribs failed for ./database/scoring/sasa_scores/
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warning: set times/attribs failed for ./database/scoring/electron_density/
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warning: set times/attribs failed for ./database/rotamer/dna/
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warning: set times/attribs failed for ./database/rotamer/ExtendedOpt1-5/
warning: set times/attribs failed for ./database/rotamer/
warning: set times/attribs failed for ./database/protocol_data/tensorflow_graphs/tensorflow_graph_repo_submodule/
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warning: set times/attribs failed for ./database/protocol_data/tensorflow_graphs/smart_annealer/debug/variables/
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warning: set times/attribs failed for ./database/protocol_data/tensorflow_graphs/peptide_fold_propensity/
warning: set times/attribs failed for ./database/protocol_data/tensorflow_graphs/gcn_test_model/variables/
warning: set times/attribs failed for ./database/protocol_data/tensorflow_graphs/gcn_test_model/
warning: set times/attribs failed for ./database/protocol_data/tensorflow_graphs/
warning: set times/attribs failed for ./database/protocol_data/protein_mpnn/
warning: set times/attribs failed for ./database/protocol_data/inverse_folding/mifst/
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warning: set times/attribs failed for ./database/protocol_data/generalizedKIC/bin_params/
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warning: set times/attribs failed for ./database/external/SPARTA+/tab/errorSurface/N/
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warning: set times/attribs failed for ./database/external/SPARTA+/tab/
warning: set times/attribs failed for ./database/external/SPARTA+/
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warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/residue_types/water/
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warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/residue_types/nucleic/rna_nonnatural/
warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/residue_types/nucleic/rna_legacy/
warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/residue_types/nucleic/dna/
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warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_pre_talaris2013/residue_types/rosetta_specific/
warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_pre_talaris2013/residue_types/ptm-caa/
warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_pre_talaris2013/residue_types/protonation_states/
warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_pre_talaris2013/residue_types/peptoids/
warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_pre_talaris2013/residue_types/nucleic/
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warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_pre_talaris2013/residue_types/metal_ions/
warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_pre_talaris2013/residue_types/l-ncaa/
warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_pre_talaris2013/residue_types/l-caa/
warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_pre_talaris2013/residue_types/carbohydrates/
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warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_05.2009_icoor/residue_types_HOMOGENEOUS/
warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_05.2009_icoor/residue_types/metal_ions/
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warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/water/
warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/terpenes/
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warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/spin_labels/
warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/sidechain_conjugation/
warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/rosetta_specific/
warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/ptm-caa/
warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/protonation_states/
warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/polyaramids/
warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/pna/
warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/peptoids/
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warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/nucleic/rna_phenix/ideal_geometry/
warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/nucleic/rna_phenix/
warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/nucleic/rna_nonnatural/
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warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/mineral_surface/
warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/metal_ions/
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warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/membrane/
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warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/l-caa/
warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/gamma-peptide/
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warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/coenzymes/
warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/ketoses/trioses/dihydroxyacetones/
warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/ketoses/trioses/
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warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/ketoses/pentoses/xyluloses/
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warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/taloses/
warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/mannoses/
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warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/patches/nucleic/
warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/patches/metals/
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warning: set times/attribs failed for ./database/chemical/residue_type_sets/coarse_two_bead/residue_types/
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warning: set times/attribs failed for ./database/chemical/residue_type_sets/coarse_rna/
warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid_rot/residue_types/
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warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/nucleic/rna_phenix/
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warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/extra/
warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/coenzymes/
warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/ketoses/trioses/dihydroxyacetones/
warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/ketoses/trioses/
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warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/ketoses/pentoses/xyluloses/
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warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/ketoses/hexoses/fructoses/
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warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/aldoses/trioses/glyceraldehydes/
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warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/aldoses/tetroses/threoses/
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warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/aldoses/hexoses/taloses/
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warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/aldoses/hexoses/galactoses/
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warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/achiral_ncaa/
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warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/patches/nucleic/rna/
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warning: set times/attribs failed for ./database/chemical/orbital_type_sets/fa_standard/
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warning: set times/attribs failed for ./database/chemical/csd_atom_type_sets/fa_standard/
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warning: set times/attribs failed for ./database/chemical/carbohydrates/linkage_conformers/
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warning: set times/attribs failed for ./database/chemical/atom_type_sets/fa_standard_talaris/extras/
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warning: set times/attribs failed for ./database/chemical/atom_type_sets/coarse_two_bead/
warning: set times/attribs failed for ./database/chemical/atom_type_sets/coarse_rna/
warning: set times/attribs failed for ./database/chemical/atom_type_sets/centroid_rot/
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Using database: database\
error: cannot create ./input_SETDB1_6BHE_fulldb_ucyRgD_6_6644/target/6BHE_ligand.params
Permission denied
error: cannot create ./input_SETDB1_6BHE_fulldb_ucyRgD_6_6644/target/._CHIP_6EFK_holo.pepmol.pdb
Permission denied
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error: cannot create ./input_SETDB1_6BHE_fulldb_ucyRgD_6_6644/liglist.txt
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error: cannot create ./input_SETDB1_6BHE_fulldb_ucyRgD_6_6644/params/Z6642204878.params
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warning: set times/attribs failed for ./input_SETDB1_6BHE_fulldb_ucyRgD_6_6644/target/
warning: set times/attribs failed for ./input_SETDB1_6BHE_fulldb_ucyRgD_6_6644/params/
warning: set times/attribs failed for ./input_SETDB1_6BHE_fulldb_ucyRgD_6_6644/
Starting watchdog...
Watchdog active.
ERROR: Unable to open file: database\chemical/residue_type_sets/fa_standard/residue_types.txt
ERROR:: Exit from: src/core/chemical/GlobalResidueTypeSet.cc line: 147
BOINC:: Error reading and gzipping output datafile: default.out
13:26:13 (18728): called boinc_finish(1)
</stderr_txt>
]]>
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