Task 1583982619
| Name | RosettaVS_SAVE_ALL_OUT_NOJRAN_SETDB1_6BHE_fulldb_IGNORE_THE_REST_ucyRgD_8_860_2980835_1_0 |
| Workunit | 1409328107 |
| Created | 1 Oct 2024, 9:48:28 UTC |
| Sent | 1 Oct 2024, 10:20:35 UTC |
| Report deadline | 4 Oct 2024, 10:20:35 UTC |
| Received | 2 Oct 2024, 5:28:49 UTC |
| Server state | Over |
| Outcome | Computation error |
| Client state | Compute error |
| Exit status | 194 (0x000000C2) EXIT_ABORTED_BY_CLIENT |
| Computer ID | 3785777 |
| Run time | 6 hours 12 min 14 sec |
| CPU time | 4 hours 8 min 53 sec |
| Validate state | Invalid |
| Credit | 0.00 |
| Device peak FLOPS | 4.76 GFLOPS |
| Application version | Rosetta Beta v6.06 windows_x86_64 |
| Peak working set size | 1,451.84 MB |
| Peak swap size | 1,553.74 MB |
| Peak disk usage | 0.62 MB |
Stderr output
<core_client_version>8.0.4</core_client_version>
<![CDATA[
<message>
Process still present 5 min after writing finish file; aborting</message>
<stderr_txt>
command: projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_windows_x86_64.exe @SETDB1_6BHE_fulldb_ucyRgD_8_860.flags -nstruct 10000 -cpu_run_time 28800 -boinc:max_nstruct 20000 -checkpoint_interval 120 -mute all -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -boinc::cpu_run_timeout 36000 -run::rng mt19937
Using database: database_f5ae1de8e1\database
Starting watchdog...
Watchdog active.
Starting watchdog...
Watchdog active.
Starting watchdog...
Watchdog active.
Starting watchdog...
Watchdog active.
Starting watchdog...
Watchdog active.
Starting watchdog...
Watchdog active.
02:24:18 (12444): Can't acquire lockfile (32) - waiting 35s
02:24:53 (12444): Can't acquire lockfile (32) - exiting
02:24:53 (12444): Error: The process cannot access the file because it is being used by another process.
(0x20)
02:34:56 (25756): Can't acquire lockfile (32) - waiting 35s
02:35:31 (25756): Can't acquire lockfile (32) - exiting
02:35:31 (25756): Error: The process cannot access the file because it is being used by another process.
(0x20)
02:45:34 (10080): Can't acquire lockfile (32) - waiting 35s
02:46:09 (10080): Can't acquire lockfile (32) - exiting
02:46:09 (10080): Error: The process cannot access the file because it is being used by another process.
(0x20)
02:56:12 (14320): Can't acquire lockfile (32) - waiting 35s
02:56:47 (14320): Can't acquire lockfile (32) - exiting
02:56:47 (14320): Error: The process cannot access the file because it is being used by another process.
(0x20)
03:06:51 (12400): Can't acquire lockfile (32) - waiting 35s
03:07:26 (12400): Can't acquire lockfile (32) - exiting
03:07:26 (12400): Error: The process cannot access the file because it is being used by another process.
(0x20)
03:17:28 (30612): Can't acquire lockfile (32) - waiting 35s
03:18:03 (30612): Can't acquire lockfile (32) - exiting
03:18:03 (30612): Error: The process cannot access the file because it is being used by another process.
(0x20)
03:28:06 (14664): Can't acquire lockfile (32) - waiting 35s
03:28:41 (14664): Can't acquire lockfile (32) - exiting
03:28:41 (14664): Error: The process cannot access the file because it is being used by another process.
(0x20)
03:38:45 (15376): Can't acquire lockfile (32) - waiting 35s
03:39:20 (15376): Can't acquire lockfile (32) - exiting
03:39:20 (15376): Error: The process cannot access the file because it is being used by another process.
(0x20)
======================================================
DONE :: 1 starting structures 18532.3 cpu seconds
This process generated 1 decoys from 1 attempts
======================================================
BOINC :: WS_max 1.43502e+09
BOINC :: Watchdog shutting down...
03:47:59 (26064): called boinc_finish(0)
./input_SETDB1_6BHE_fulldb_ucyRgD_8_860/target/6BHE_holo_modify_0001.pdb: write error (disk full?). Continue? (y/n/^C)
Unhandled Exception Detected...
- Unhandled Exception Record -
Reason: Breakpoint Encountered (0x80000003) at address 0x00007FFAC9837A62
Engaging BOINC Windows Runtime Debugger...
********************
BOINC Windows Runtime Debugger Version 7.9.0
Dump Timestamp : 10/02/24 03:55:06
Install Directory : C:\Program Files\BOINC\
Data Directory : F:\BOINC
Project Symstore : https://boinc.bakerlab.org/rosetta/symstore
LoadLibraryA( F:\BOINC\dbghelp.dll ): GetLastError = 126
Loaded Library : dbghelp.dll
LoadLibraryA( F:\BOINC\symsrv.dll ): GetLastError = 126
LoadLibraryA( symsrv.dll ): GetLastError = 126
LoadLibraryA( F:\BOINC\srcsrv.dll ): GetLastError = 126
LoadLibraryA( srcsrv.dll ): GetLastError = 126
LoadLibraryA( F:\BOINC\version.dll ): GetLastError = 126
Loaded Library : version.dll
Debugger Engine : 4.0.5.0
Symbol Search Path: F:\BOINC\slots\10;F:\BOINC\projects\boinc.bakerlab.org_rosetta;srv*F:\BOINC\projects\boinc.bakerlab.org_rosetta\symbols*http://msdl.microsoft.com/download/symbols;srv*F:\BOINC\projects\boinc.bakerlab.org_rosetta\symbols*https://boinc.bakerlab.org/rosetta/symstore
ModLoad: 000000008bd50000 00000000062b2000 F:\BOINC\projects\boinc.bakerlab.org_rosetta\rosetta_beta_6.06_windows_x86_64.exe (-exported- Symbols Loaded)
ModLoad: 00000000cc290000 0000000000217000 C:\WINDOWS\SYSTEM32\ntdll.dll (6.2.22621.4111) (-exported- Symbols Loaded)
File Version : 10.0.22621.3374 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.22621.3374
ModLoad: 00000000cb7b0000 00000000000c4000 C:\WINDOWS\System32\KERNEL32.DLL (6.2.22621.3958) (-exported- Symbols Loaded)
File Version : 10.0.22621.4036 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.22621.4036
ModLoad: 00000000c9720000 00000000003ad000 C:\WINDOWS\System32\KERNELBASE.dll (6.2.22621.4111) (-exported- Symbols Loaded)
File Version : 10.0.22621.4036 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.22621.4036
ModLoad: 00000000c9bf0000 0000000000111000 C:\WINDOWS\System32\ucrtbase.dll (6.2.22621.3593) (-exported- Symbols Loaded)
File Version : 10.0.22621.3593 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.22621.3593
ModLoad: 00000000cb430000 00000000000b2000 C:\WINDOWS\System32\ADVAPI32.dll (6.2.22621.3810) (-exported- Symbols Loaded)
File Version : 10.0.22621.1 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.22621.1
ModLoad: 00000000cb4f0000 00000000000a7000 C:\WINDOWS\System32\msvcrt.dll (7.0.22621.2506) (-exported- Symbols Loaded)
File Version : 7.0.22621.2506 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 7.0.22621.2506
ModLoad: 00000000cc1a0000 00000000000a9000 C:\WINDOWS\System32\sechost.dll (6.2.22621.3810) (-exported- Symbols Loaded)
File Version : 10.0.22621.1 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.22621.1
ModLoad: 00000000c9dd0000 0000000000028000 C:\WINDOWS\System32\bcrypt.dll (6.2.22621.2506) (-exported- Symbols Loaded)
File Version : 10.0.22621.1 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.22621.1
ModLoad: 00000000cafb0000 0000000000114000 C:\WINDOWS\System32\RPCRT4.dll (6.2.22621.3810) (-exported- Symbols Loaded)
File Version : 10.0.22621.2506 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.22621.2506
ModLoad: 00000000cb320000 0000000000071000 C:\WINDOWS\System32\WS2_32.dll (6.2.22621.1) (-exported- Symbols Loaded)
File Version : 10.0.22621.1 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.22621.1
ModLoad: 00000000ca330000 0000000000867000 C:\WINDOWS\System32\SHELL32.dll (6.2.22621.4111) (-exported- Symbols Loaded)
File Version : 10.0.22621.4036 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.22621.4036
ModLoad: 00000000c9ef0000 000000000009a000 C:\WINDOWS\System32\msvcp_win.dll (6.2.22621.3374) (-exported- Symbols Loaded)
File Version : 10.0.22621.3374 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.22621.3374
ModLoad: 00000000cb170000 00000000001ae000 C:\WINDOWS\System32\USER32.dll (6.2.22621.4111) (-exported- Symbols Loaded)
File Version : 10.0.22621.1 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.22621.1
ModLoad: 00000000c9f90000 0000000000026000 C:\WINDOWS\System32\win32u.dll (6.2.22621.4169) (-exported- Symbols Loaded)
File Version : 10.0.22621.4169 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.22621.4169
ModLoad: 00000000cb3a0000 0000000000029000 C:\WINDOWS\System32\GDI32.dll (6.2.22621.4036) (-exported- Symbols Loaded)
File Version : 10.0.22621.4036 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.22621.4036
ModLoad: 00000000c9ad0000 0000000000119000 C:\WINDOWS\System32\gdi32full.dll (6.2.22621.3958) (-exported- Symbols Loaded)
File Version : 10.0.22621.3958 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.22621.3958
ModLoad: 0000000085180000 0000000000100000 C:\WINDOWS\SYSTEM32\OPENGL32.dll (6.2.22621.3672) (-exported- Symbols Loaded)
File Version : 10.0.22621.3672 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.22621.3672
ModLoad: 00000000caba0000 000000000038e000 C:\WINDOWS\System32\combase.dll (6.2.22621.4111) (-exported- Symbols Loaded)
File Version : 10.0.22621.1 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.22621.1
ModLoad: 00000000aef50000 000000000002d000 C:\WINDOWS\SYSTEM32\GLU32.dll (6.2.22621.2506) (-exported- Symbols Loaded)
File Version : 10.0.22621.1 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.22621.1
ModLoad: 00000000c8d50000 000000000000c000 C:\WINDOWS\SYSTEM32\CRYPTBASE.DLL (6.2.22621.1) (-exported- Symbols Loaded)
File Version : 10.0.22621.1 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.22621.1
ModLoad: 00000000c6be0000 0000000000037000 C:\WINDOWS\SYSTEM32\dxcore.dll (6.2.22621.3958) (-exported- Symbols Loaded)
File Version : 10.0.22621.3958 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.22621.3958
ModLoad: 00000000cb0d0000 0000000000031000 C:\WINDOWS\System32\IMM32.DLL (6.2.22621.3374) (-exported- Symbols Loaded)
File Version : 10.0.22621.3374 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.22621.3374
ModLoad: 00000000c9e00000 000000000007b000 C:\WINDOWS\System32\bcryptPrimitives.dll (6.2.22621.3672) (-exported- Symbols Loaded)
File Version : 10.0.22621.3672 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.22621.3672
ModLoad: 00000000c85c0000 0000000000018000 C:\WINDOWS\SYSTEM32\kernel.appcore.dll (6.2.22621.3958) (-exported- Symbols Loaded)
File Version : 10.0.22621.3958 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.22621.3958
ModLoad: 00000000c86d0000 0000000000034000 C:\WINDOWS\SYSTEM32\ntmarta.dll (6.2.22621.1) (-exported- Symbols Loaded)
File Version : 10.0.22621.1 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.22621.1
ModLoad: 00000000c2a30000 0000000000232000 C:\WINDOWS\SYSTEM32\dbghelp.dll (6.2.22621.3593) (-exported- Symbols Loaded)
File Version : 10.0.22621.3593 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.22621.3593
ModLoad: 00000000cbf50000 00000000000d7000 C:\WINDOWS\System32\OLEAUT32.dll (6.2.22621.3672) (-exported- Symbols Loaded)
File Version : 10.0.22621.3672 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.22621.3672
ModLoad: 00000000c5c10000 000000000000a000 C:\WINDOWS\SYSTEM32\version.dll (6.2.22621.1) (-exported- Symbols Loaded)
File Version : 10.0.22621.1 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.22621.1
*** Dump of the Process Statistics: ***
- I/O Operations Counters -
Read: 40, Write: 139, Other 2429
- I/O Transfers Counters -
Read: 156181, Write: 321186, Other 44770
- Paged Pool Usage -
QuotaPagedPoolUsage: 10640, QuotaPeakPagedPoolUsage: 371984
QuotaNonPagedPoolUsage: 14729216, QuotaPeakNonPagedPoolUsage: 9240
- Virtual Memory Usage -
VirtualSize: 14198, PeakVirtualSize: 244674560
- Pagefile Usage -
PagefileUsage: 14729216, PeakPagefileUsage: 14729216
- Working Set Size -
WorkingSetSize: 371984, PeakWorkingSetSize: 57573376, PageFaultCount: 57573376
*** Dump of thread ID 18684 (state: Waiting): ***
- Information -
Status: Wait Reason: UserRequest, , Kernel Time: 312500.000000, User Time: 625000.000000, Wait Time: 112268208.000000
- Unhandled Exception Record -
Reason: Breakpoint Encountered (0x80000003) at address 0x00007FFAC9837A62
- Registers -
rax=0000000000000000 rbx=000000003c8fe780 rcx=00000000908cbae2 rdx=000000003c8fe780 rsi=000000003c8fe7ac rdi=00000000c9c09f60
r8=000000003c8fe780 r9=00000000908cbad9 r10=0000000000000fff r11=0000000000000ff0 r12=00000000cb7c8650 r13=000000003c8fe058
r14=000000003c8fe08a r15=000000003c8fe080 rip=00000000c9837a62 rsp=000000003c8fdfd8 rbp=000000003c8fe021
cs=0033 ss=002b ds=002b es=002b fs=0053 gs=002b efl=00000246
- Callstack -
ChildEBP RetAddr Args to Child
3c8fdfd0 8bfec9f6 3c8fe780 3c8fe7ac c9c09f60 000001f4 KERNELBASE!DebugBreak+0x0
3c8ff800 cb7c257d 00000000 00000000 00000000 00000000 rosetta_beta_6.06_windows_x86_6!+0x0
3c8ff830 cc2eaf28 00000000 00000000 00000000 00000000 KERNEL32!BaseThreadInitThunk+0x0
3c8ff8b0 00000000 00000000 00000000 00000000 00000000 ntdll!RtlUserThreadStart+0x0
*** Dump of thread ID 17684 (state: Waiting): ***
- Information -
Status: Wait Reason: Executive, , Kernel Time: 468750.000000, User Time: 468750.000000, Wait Time: 112249416.000000
- Registers -
rax=0000000000000006 rbx=000000003c4ea768 rcx=000000000000005c rdx=0000000000000000 rsi=000000000000005c rdi=0000000000000000
r8=000000003c4ea7c0 r9=000000003c4ea7b8 r10=0000000000000000 r11=000000003c4ea6b0 r12=0000000000001000 r13=0000000000000000
r14=000000007d6d5f20 r15=0000000000000000 rip=00000000cc3301f7 rsp=000000003c4ea638 rbp=0000000000001000
cs=0033 ss=002b ds=0000 es=0000 fs=0000 gs=0000 efl=00000202
- Callstack -
ChildEBP RetAddr Args to Child
3c4ea630 c974baeb 00000000 00001010 7b733920 c9762cd3 ntdll!ZwReadFile+0x0
3c4ea6a0 c9bf7693 00000000 00000000 00000079 3c4ea768 KERNELBASE!ReadFile+0x0
3c4ea740 c9bf77ef c9cef400 7d6d5f20 00001000 00000000 ucrtbase!_fread_nolock_s+0x0
3c4ea780 c9bf7a0e 00000000 c9cef4a0 7d6d5f20 7f215f64 ucrtbase!_read+0x0
3c4ea7b0 c9c1b162 c9cef4a0 7f215f64 00000032 8d775100 ucrtbase!_fgetc_nolock+0x0
3c4ea810 8d774f03 7d54eb01 8d775100 c9cef4a0 7f215e40 ucrtbase!fgets+0x0
3c4ea850 8d774e67 0000c800 00000000 0000000a c9bf69d8 rosetta_beta_6.06_windows_x86_6!_ZN5cppdb14version_numberEv+0x0
3c4ea8f0 8f1b086d 00000000 00000000 00000000 00000000 rosetta_beta_6.06_windows_x86_6!_ZN5cppdb14version_numberEv+0x0
3c4ea980 8f1b1d7c 00000000 00000000 00000000 cc2cc350 rosetta_beta_6.06_windows_x86_6!xmlUTF8Strsub+0x0
3c4eafe0 8f1abeda 00000000 00000000 00028000 00000230 rosetta_beta_6.06_windows_x86_6!xmlUTF8Strsub+0x0
3c4eb1a0 8d7736ed 7d5b8370 00000000 00000000 cc2e3800 rosetta_beta_6.06_windows_x86_6!xmlUTF8Strsub+0x0
3c4eb2a0 8d771eb2 00000001 8d76d520 7d832200 7d29f4d0 rosetta_beta_6.06_windows_x86_6!_ZN5cppdb14version_numberEv+0x0
3c4eb320 8cb5d464 7d832200 7d29f4d0 7f215e40 7d832200 rosetta_beta_6.06_windows_x86_6!_ZN5cppdb14version_numberEv+0x0
3c4eb3b0 8cb5cd31 00000005 3c4eb4b8 00000000 00000104 rosetta_beta_6.06_windows_x86_6!+0x0
3c4eb3f0 8bff337c 3c4eb4b8 0000005f 7d29fa91 01010100 rosetta_beta_6.06_windows_x86_6!+0x0
3c4eb470 8bff30b8 3c4eb4a8 3c4eb4b0 3c4ff8e0 8bd55d56 rosetta_beta_6.06_windows_x86_6!+0x0
3c4eb4e0 8bd54e1e 00000015 00000000 00000000 00000000 rosetta_beta_6.06_windows_x86_6!+0x0
3c4ffe00 8bd51315 00000015 91c09110 91c09108 00000000 rosetta_beta_6.06_windows_x86_6!+0x0
3c4ffe50 8bd51366 00000000 00000000 00000000 00000000 rosetta_beta_6.06_windows_x86_6!+0x0
3c4ffe80 cb7c257d 00000000 00000000 00000000 00000000 rosetta_beta_6.06_windows_x86_6!+0x0
3c4ffeb0 cc2eaf28 00000000 00000000 00000000 00000000 KERNEL32!BaseThreadInitThunk+0x0
3c4fff30 00000000 00000000 00000000 00000000 00000000 ntdll!RtlUserThreadStart+0x0
*** Dump of thread ID 12420 (state: Waiting): ***
- Information -
Status: Wait Reason: EventPairLow, , Kernel Time: 0.000000, User Time: 0.000000, Wait Time: 112267800.000000
- Registers -
rax=00000000000001e3 rbx=000000007b730c50 rcx=0000000000000018 rdx=000000007b74c6d0 rsi=0000000000000001 rdi=000000007b74ca50
r8=000000007d40b190 r9=000000007ffe03b0 r10=000000001ade1170 r11=000000007d6cf110 r12=0000000000000000 r13=0000000000000000
r14=000000000000ffff r15=0000000000000002 rip=00000000cc333d87 rsp=000000003c5ffc08 rbp=0000000000000000
cs=0033 ss=002b ds=0000 es=0000 fs=0000 gs=0000 efl=00000202
- Callstack -
ChildEBP RetAddr Args to Child
3c5ffc00 cc2c585e 7b730c50 7b730c50 00000001 7b730c50 ntdll!NtWaitForWorkViaWorkerFactory+0x0
3c5ffee0 cb7c257d 00000000 00000000 00000000 00000000 ntdll!RtlClearThreadWorkOnBehalfTicket+0x0
3c5fff10 cc2eaf28 00000000 00000000 00000000 00000000 KERNEL32!BaseThreadInitThunk+0x0
3c5fff90 00000000 00000000 00000000 00000000 00000000 ntdll!RtlUserThreadStart+0x0
*** Debug Message Dump ****
*** Foreground Window Data ***
Window Name :
Window Class :
Window Process ID: 0
Window Thread ID : 0
Exiting...
</stderr_txt>
]]>
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