Task 1583867757

Name srhallu__10_hallucinated_187_143.cyclic_predicted.r1_SAVE_ALL_OUT_2980413_505_1
Workunit 1408919230
Created 24 Sep 2024, 3:26:02 UTC
Sent 24 Sep 2024, 3:26:06 UTC
Report deadline 27 Sep 2024, 3:26:06 UTC
Received 24 Sep 2024, 22:24:34 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4684952
Run time 3 hours 59 min 20 sec
CPU time 2 hours 59 min 45 sec
Validate state Valid
Credit 138.12
Device peak FLOPS 5.60 GFLOPS
Application version Rosetta Beta v6.06
windows_x86_64
Peak working set size 282.10 MB
Peak swap size 253.05 MB
Peak disk usage 1,182.80 MB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
command: projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_windows_x86_64.exe @srhallu__10_hallucinated_187_143.cyclic_predicted.r1.flags -nstruct 10000 -cpu_run_time 28800 -boinc:max_nstruct 20000 -checkpoint_interval 120 -mute all -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -boinc::cpu_run_timeout 36000 -run::rng mt19937 -constant_seed -jran 2653553
Extracting in project directory: database_f5ae1de8e1.zip
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/trioses/glyceraldehydes/D-Gly.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/pentoses/lyxoses/to4-alpha-L-Lyxp.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/pentoses/xyloses/to5-alpha-D-Xylf.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/pentoses/xyloses/to2-beta-L-Xylf.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/pentoses/arabinoses/to2-alpha-D-Araf.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/pentoses/arabinoses/to2-beta-L-Arap.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/polyaramids/UAC.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/polyaramids/KAC.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/polyaramids/SAH.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/polyaramids/MAH.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/polyaramids/OA1.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/l-caa/SER.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard/residue_types/gamma-peptide/4D3L2L_GALA.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_pre_talaris2013/residue_types/l-ncaa/alpha-methyl-3-hydroxy-tyrosine.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_pre_talaris2013/residue_types/protonation_states/HIS_P.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_pre_talaris2013/residue_types/metal_ions/FE2.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_pre_talaris2013/residue_types/l-caa/ASP.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_pre_talaris2013/residue_types/mineral_surface/OPH.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_pre_talaris2013/residue_types/spin_labels/R1A_rotamers_nonclashing_moe_saved.pdb
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_pre_talaris2013/patches/NtermProteinFull.txt
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_pre_talaris2013/patches/protein_cutpoint_lower.txt
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_pre_talaris2013/patches/oop_pre.txt
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_pre_talaris2013/metapatches/aromatic_methylation.txt
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_pre_talaris2013/metapatches/aromatic_bromination.txt
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/coarse_two_bead/residue_types/HIS.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_05.2009_icoor/metapatches/aromatic_iodination.txt
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_05.2009_icoor/metapatches/aromatic_fluorination.txt
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/residue_type_sets/fa_standard_05.2009_icoor/residue_types_HOMOGENEOUS/PRO.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/ring_conformer_sets/fd_alternate/5-membered_aromatic_ring_conformers.data
        Permission denied

CreateFile() error 32 when trying set file time
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/atom_type_sets/fa_standard/extras/NACCESS_sasa_radii.txt
        Permission denied

CreateFile() error 32 when trying set file time
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/carbohydrates/common_glycans/common_names.txt
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/carbohydrates/common_glycans/core_3_O-glycan.iupac
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/chemical/carbohydrates/common_glycans/core_4_O-glycan.iupac
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/virtual_enzymes/glycosyltransferases/c_jejuni/PglB
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/virtual_enzymes/glycosyltransferases/h_sapiens/OGT
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/virtual_enzymes/DNA_methyltransferases/h_sapiens/generic
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/virtual_enzymes/kinases/h_sapiens/CaMK1
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/virtual_enzymes/kinases/h_sapiens/PAK
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/virtual_enzymes/kinases/h_sapiens/PKCmu
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/bondlength_bondangle/default-angles.txt
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/facts/GB_AA_PLACEHOLDER.params
        No such file or directory
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/facts/modified/GLU.params
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/mhc_epitope/iedb_data.db
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/mhc_epitope/Distribution of IEDB-derived data with Rosetta.pdf
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/saxs/CYS__CEN.ff
        Permission denied

CreateFile() error 32 when trying set file time
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/hbonds/correct_no_lr_params/HBDonChemType.csv
        No such file or directory
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/hbonds/BBasSC_params/HBSeqSep.csv
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/hbonds/newOH_params/HBEval.csv
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/hbonds/newCHI_params/HBAccHybridization.csv
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/hbonds/newCHI_params/HBEval.csv
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/hbonds/score12_params/HybridizationType.csv
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/hbonds/score12_params/HBEval.csv
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/hbonds/no_lr_params/HBFadeIntervals.csv
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/sc/sc_radii.lib
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/centroid_smooth/cen_rot_pair_ang_params.txt
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/goap/dist_table.dat.gz
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/goap/angle_table.dat.gz
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/carbon_hbond/ch_o_bond_potential.dat
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/pointwater/norm_trunc6/E_TYR_OH_CZ.dat
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/score_functions/pointwater/norm_trunc6/E_HIS_ND1_XXX.dat
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/qsar/shape_histogram_data.js
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/ProQ/ProQM_model.3.linear
        Permission denied
error:  cannot delete old C:/ProgramData/BOINC/projects/boinc.bakerlab.org_rosetta/database_f5ae1de8e1/database/scoring/dna/bound_dna_dihedrals.txt
        Permission denied
Extracting in slot directory: minirosetta_database.zip
Using database: database\
======================================================
DONE ::     1 starting structures  10791.7 cpu seconds
This process generated     61 decoys from      61 attempts
======================================================
BOINC :: WS_max 0

BOINC :: Watchdog shutting down...
16:22:14 (6408): called boinc_finish(0)

</stderr_txt>
]]>




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