Name | rb_07_02_622748_616730_ab_t000__robetta_cstwt_5.0_FT_IGNORE_THE_REST_06_11_2978498_39_1 |
Workunit | 1405011197 |
Created | 4 Jul 2024, 1:57:00 UTC |
Sent | 4 Jul 2024, 1:57:02 UTC |
Report deadline | 7 Jul 2024, 1:57:02 UTC |
Received | 6 Jul 2024, 2:42:33 UTC |
Server state | Over |
Outcome | Computation error |
Client state | Compute error |
Exit status | 1 (0x00000001) Unknown error code |
Computer ID | 6205255 |
Run time | 6 hours 6 min |
CPU time | 5 hours 59 min 28 sec |
Validate state | Invalid |
Credit | 0.00 |
Device peak FLOPS | 4.69 GFLOPS |
Application version | Rosetta v4.20 x86_64-apple-darwin |
Peak working set size | 2,217.46 MB |
Peak swap size | 49,109.35 MB |
Peak disk usage | 29.22 MB |
<core_client_version>7.16.21</core_client_version> <![CDATA[ <message> process exited with code 1 (0x1, -255)</message> <stderr_txt> command: rosetta_4.20_x86_64-apple-darwin @rb_07_02_622748_616730_ab_t000__robetta_FLAGS -in::file::fasta t000_.fasta -jumps:pairing_file t000_.fasta.bbcontacts.jumps -jumps:random_sheets 1 -constraints::cst_file t000_.fasta.CB.cst -constraints:cst_weight 5.0 -constraints::cst_fa_file t000_.fasta.MIN.cst -constraints:cst_fa_weight 5.0 -in:file:boinc_wu_zip rb_07_02_622748_616730_ab_t000__robetta.zip -frag3 rb_07_02_622748_616730_ab_t000__robetta.200.3mers.index.gz -fragA rb_07_02_622748_616730_ab_t000__robetta.200.11mers.index.gz -fragB rb_07_02_622748_616730_ab_t000__robetta.200.6mers.index.gz -nstruct 10000 -cpu_run_time 28800 -boinc:max_nstruct 20000 -checkpoint_interval 120 -mute all -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -boinc::cpu_run_timeout 36000 -run::rng mt19937 -constant_seed -jran 1988854 Using database: database_357d5d93529_n_methyl/minirosetta_database [ ERROR ]: Caught exception: File: src/core/pack/dunbrack/SingleResidueDunbrackLibrary.hh:306 chi angle must be between -180 and 180: nan ------------------------ Begin developer's backtrace ------------------------- BACKTRACE: 0 rosetta_4.20_x86_64-apple-darwin 0x0000000104f02630 Kernel::kernel_precomputed(int, int) const + 322720 1 rosetta_4.20_x86_64-apple-darwin 0x0000000104f01eb1 Kernel::kernel_precomputed(int, int) const + 320801 2 rosetta_4.20_x86_64-apple-darwin 0x00000001034f2751 core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 753137 3 rosetta_4.20_x86_64-apple-darwin 0x00000001034f0b7b core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 746011 4 rosetta_4.20_x86_64-apple-darwin 0x00000001036cd6d6 core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 2698614 5 rosetta_4.20_x86_64-apple-darwin 0x00000001034bcf18 core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 533944 6 rosetta_4.20_x86_64-apple-darwin 0x0000000103d361e6 boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, core::pose::Pose, core::conformation::signals::XYZEvent const&>, boost::_bi::list2<boost::_bi::value<core::pose::Pose*>, boost::arg<1> > >, void, core::conformation::signals::XYZEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::XYZEvent) + 1754614 7 rosetta_4.20_x86_64-apple-darwin 0x0000000103dd3bc6 core::scoring::compare_by_abs(void const*, void const*) + 306326 8 rosetta_4.20_x86_64-apple-darwin 0x0000000103dcd9aa core::scoring::compare_by_abs(void const*, void const*) + 281210 9 rosetta_4.20_x86_64-apple-darwin 0x0000000103436d53 boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::moves::PyMOLObserver, core::pose::signals::ConformationEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::moves::PyMOLObserver*>, boost::arg<1> > >, void, core::pose::signals::ConformationEvent>::invoke(boost::detail::function::function_buffer&, core::pose::signals::ConformationEvent) + 2466403 10 rosetta_4.20_x86_64-apple-darwin 0x000000010343f4b7 core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 19287 11 rosetta_4.20_x86_64-apple-darwin 0x000000010343f121 core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 18369 12 rosetta_4.20_x86_64-apple-darwin 0x0000000103447c7e core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 54046 13 rosetta_4.20_x86_64-apple-darwin 0x0000000103442925 core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 32709 14 rosetta_4.20_x86_64-apple-darwin 0x000000010343431e boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::moves::PyMOLObserver, core::pose::signals::ConformationEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::moves::PyMOLObserver*>, boost::arg<1> > >, void, core::pose::signals::ConformationEvent>::invoke(boost::detail::function::function_buffer&, core::pose::signals::ConformationEvent) + 2455598 15 rosetta_4.20_x86_64-apple-darwin 0x0000000102b4af14 boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1> > >, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 7259236 16 rosetta_4.20_x86_64-apple-darwin 0x0000000102b4aac2 boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1> > >, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 7258130 17 rosetta_4.20_x86_64-apple-darwin 0x0000000102b4b19d boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1> > >, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 7259885 18 rosetta_4.20_x86_64-apple-darwin 0x000000010270d013 boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1> > >, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 2811235 19 rosetta_4.20_x86_64-apple-darwin 0x000000010270e38b boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1> > >, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 2816219 20 rosetta_4.20_x86_64-apple-darwin 0x00000001027108ad boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1> > >, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 2825725 21 rosetta_4.20_x86_64-apple-darwin 0x000000010273765f boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1> > >, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 2984879 22 rosetta_4.20_x86_64-apple-darwin 0x0000000101986ea2 protocols::multistage_rosetta_scripts::cluster::complex_type_name_for_cluster_metric(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&) + 3828914 23 rosetta_4.20_x86_64-apple-darwin 0x0000000101993226 protocols::multistage_rosetta_scripts::cluster::complex_type_name_for_cluster_metric(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&) + 3878966 24 rosetta_4.20_x86_64-apple-darwin 0x0000000101995a5f protocols::multistage_rosetta_scripts::cluster::complex_type_name_for_cluster_metric(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&) + 3889263 25 rosetta_4.20_x86_64-apple-darwin 0x0000000100f2c128 rosetta_4.20_x86_64-apple-darwin + 24872 26 dyld 0x000000020739f52e start + 462 27 ??? 0x0000000000000009 0x0 + 9 ------------------------- End developer's backtrace -------------------------- </stderr_txt> ]]>
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