Task 1578784732

Name rb_07_02_622748_616730_ab_t000__robetta_cstwt_5.0_FT_IGNORE_THE_REST_04_05_2978498_14_1
Workunit 1405010013
Created 3 Jul 2024, 10:09:25 UTC
Sent 3 Jul 2024, 10:09:30 UTC
Report deadline 6 Jul 2024, 10:09:30 UTC
Received 3 Jul 2024, 13:35:54 UTC
Server state Over
Outcome Computation error
Client state Compute error
Exit status 1 (0x00000001) Unknown error code
Computer ID 6271076
Run time 24 min 31 sec
CPU time 23 min 51 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 4.84 GFLOPS
Application version Rosetta v4.20
x86_64-apple-darwin
Peak working set size 199.19 MB
Peak swap size 35,510.87 MB
Peak disk usage 24.39 MB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<message>
process exited with code 1 (0x1, -255)</message>
<stderr_txt>
command: rosetta_4.20_x86_64-apple-darwin @rb_07_02_622748_616730_ab_t000__robetta_FLAGS -in::file::fasta t000_.fasta -jumps:pairing_file t000_.fasta.bbcontacts.jumps -jumps:random_sheets 1 -constraints::cst_file t000_.fasta.CB.cst -constraints:cst_weight 5.0 -constraints::cst_fa_file t000_.fasta.MIN.cst -constraints:cst_fa_weight 5.0 -in:file:boinc_wu_zip rb_07_02_622748_616730_ab_t000__robetta.zip -frag3 rb_07_02_622748_616730_ab_t000__robetta.200.3mers.index.gz -fragA rb_07_02_622748_616730_ab_t000__robetta.200.5mers.index.gz -fragB rb_07_02_622748_616730_ab_t000__robetta.200.4mers.index.gz -nstruct 10000 -cpu_run_time 28800 -boinc:max_nstruct 20000 -checkpoint_interval 120 -mute all -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -boinc::cpu_run_timeout 36000 -run::rng mt19937 -constant_seed -jran 1990375
Using database: database_357d5d93529_n_methyl/minirosetta_database

[ ERROR ]: Caught exception:


File: src/core/pack/dunbrack/SingleResidueDunbrackLibrary.hh:306
chi angle must be between -180 and 180: nan
 ------------------------ Begin developer's backtrace ------------------------- 
BACKTRACE:
0   rosetta_4.20_x86_64-apple-darwin    0x00000001087f5630 Kernel::kernel_precomputed(int, int) const + 322720
1   rosetta_4.20_x86_64-apple-darwin    0x00000001087f4eb1 Kernel::kernel_precomputed(int, int) const + 320801
2   rosetta_4.20_x86_64-apple-darwin    0x0000000106de5751 core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 753137
3   rosetta_4.20_x86_64-apple-darwin    0x0000000106de3b7b core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 746011
4   rosetta_4.20_x86_64-apple-darwin    0x0000000106daff18 core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 533944
5   rosetta_4.20_x86_64-apple-darwin    0x00000001076291e6 boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, core::pose::Pose, core::conformation::signals::XYZEvent const&>, boost::_bi::list2<boost::_bi::value<core::pose::Pose*>, boost::arg<1>>>, void, core::conformation::signals::XYZEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::XYZEvent) + 1754614
6   rosetta_4.20_x86_64-apple-darwin    0x00000001076c6bc6 core::scoring::compare_by_abs(void const*, void const*) + 306326
7   rosetta_4.20_x86_64-apple-darwin    0x00000001076c09aa core::scoring::compare_by_abs(void const*, void const*) + 281210
8   rosetta_4.20_x86_64-apple-darwin    0x0000000106d29d53 boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::moves::PyMOLObserver, core::pose::signals::ConformationEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::moves::PyMOLObserver*>, boost::arg<1>>>, void, core::pose::signals::ConformationEvent>::invoke(boost::detail::function::function_buffer&, core::pose::signals::ConformationEvent) + 2466403
9   rosetta_4.20_x86_64-apple-darwin    0x0000000106d324b7 core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 19287
10  rosetta_4.20_x86_64-apple-darwin    0x0000000106d32121 core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 18369
11  rosetta_4.20_x86_64-apple-darwin    0x0000000106d3ac7e core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 54046
12  rosetta_4.20_x86_64-apple-darwin    0x0000000106d35925 core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 32709
13  rosetta_4.20_x86_64-apple-darwin    0x0000000106d2731e boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::moves::PyMOLObserver, core::pose::signals::ConformationEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::moves::PyMOLObserver*>, boost::arg<1>>>, void, core::pose::signals::ConformationEvent>::invoke(boost::detail::function::function_buffer&, core::pose::signals::ConformationEvent) + 2455598
14  rosetta_4.20_x86_64-apple-darwin    0x000000010643df14 boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1>>>, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 7259236
15  rosetta_4.20_x86_64-apple-darwin    0x000000010643dac2 boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1>>>, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 7258130
16  rosetta_4.20_x86_64-apple-darwin    0x000000010643e19d boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1>>>, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 7259885
17  rosetta_4.20_x86_64-apple-darwin    0x0000000106000013 boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1>>>, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 2811235
18  rosetta_4.20_x86_64-apple-darwin    0x000000010600138b boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1>>>, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 2816219
19  rosetta_4.20_x86_64-apple-darwin    0x00000001060038ad boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1>>>, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 2825725
20  rosetta_4.20_x86_64-apple-darwin    0x000000010602a65f boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1>>>, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 2984879
21  rosetta_4.20_x86_64-apple-darwin    0x0000000105279ea2 protocols::multistage_rosetta_scripts::cluster::complex_type_name_for_cluster_metric(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>> const&) + 3828914
22  rosetta_4.20_x86_64-apple-darwin    0x0000000105286226 protocols::multistage_rosetta_scripts::cluster::complex_type_name_for_cluster_metric(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>> const&) + 3878966
23  rosetta_4.20_x86_64-apple-darwin    0x0000000105288a5f protocols::multistage_rosetta_scripts::cluster::complex_type_name_for_cluster_metric(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>> const&) + 3889263
24  rosetta_4.20_x86_64-apple-darwin    0x000000010481f128 rosetta_4.20_x86_64-apple-darwin + 24872
25  dyld                                0x000000020ab82366 start + 1942
 ------------------------- End developer's backtrace -------------------------- 

</stderr_txt>
]]>




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