Task 1578780503
| Name | rb_07_02_622773_616752_ab_t000__robetta_IGNORE_THE_REST_03_06_2978508_8_0 |
| Workunit | 1405018059 |
| Created | 3 Jul 2024, 5:29:35 UTC |
| Sent | 3 Jul 2024, 5:30:10 UTC |
| Report deadline | 6 Jul 2024, 5:30:10 UTC |
| Received | 5 Jul 2024, 17:11:39 UTC |
| Server state | Over |
| Outcome | Computation error |
| Client state | Compute error |
| Exit status | 194 (0x000000C2) EXIT_ABORTED_BY_CLIENT |
| Computer ID | 5980915 |
| Run time | 5 hours 33 min 27 sec |
| CPU time | 5 hours 33 min 27 sec |
| Validate state | Invalid |
| Credit | 0.00 |
| Device peak FLOPS | 5.24 GFLOPS |
| Application version | Rosetta v4.20 windows_x86_64 |
| Peak working set size | 921.38 MB |
| Peak swap size | 911.40 MB |
| Peak disk usage | 13.95 MB |
Stderr output
<core_client_version>7.16.11</core_client_version>
<![CDATA[
<message>
Process still present 5 min after writing finish file; aborting</message>
<stderr_txt>
command: projects/boinc.bakerlab.org_rosetta/rosetta_4.20_windows_x86_64.exe @rb_07_02_622773_616752_ab_t000__robetta_FLAGS -in::file::fasta t000_.fasta -in:file:boinc_wu_zip rb_07_02_622773_616752_ab_t000__robetta.zip -frag3 rb_07_02_622773_616752_ab_t000__robetta.200.3mers.index.gz -fragA rb_07_02_622773_616752_ab_t000__robetta.200.6mers.index.gz -fragB rb_07_02_622773_616752_ab_t000__robetta.200.3mers.index.gz -nstruct 10000 -cpu_run_time 28800 -boinc:max_nstruct 20000 -checkpoint_interval 120 -mute all -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -boinc::cpu_run_timeout 36000 -run::rng mt19937 -constant_seed -jran 1982249
Using database: database_357d5d93529_n_methyl\minirosetta_database
07:50:08 (47768): Can't acquire lockfile (32) - waiting 35s
07:50:43 (47768): Can't acquire lockfile (32) - exiting
07:50:43 (47768): Error: The process cannot access the file because it is being used by another process.
(0x20)
08:01:19 (57104): Can't acquire lockfile (32) - waiting 35s
08:01:54 (57104): Can't acquire lockfile (32) - exiting
08:01:54 (57104): Error: The process cannot access the file because it is being used by another process.
(0x20)
08:12:34 (8024): Can't acquire lockfile (32) - waiting 35s
08:13:09 (8024): Can't acquire lockfile (32) - exiting
08:13:09 (8024): Error: The process cannot access the file because it is being used by another process.
(0x20)
08:23:33 (54804): Can't acquire lockfile (32) - waiting 35s
08:24:08 (54804): Can't acquire lockfile (32) - exiting
08:24:08 (54804): Error: The process cannot access the file because it is being used by another process.
(0x20)
08:34:50 (6476): Can't acquire lockfile (32) - waiting 35s
08:35:25 (6476): Can't acquire lockfile (32) - exiting
08:35:25 (6476): Error: The process cannot access the file because it is being used by another process.
(0x20)
08:45:46 (18664): Can't acquire lockfile (32) - waiting 35s
08:46:21 (18664): Can't acquire lockfile (32) - exiting
08:46:21 (18664): Error: The process cannot access the file because it is being used by another process.
(0x20)
08:56:42 (45240): Can't acquire lockfile (32) - waiting 35s
08:57:17 (45240): Can't acquire lockfile (32) - exiting
08:57:17 (45240): Error: The process cannot access the file because it is being used by another process.
(0x20)
09:07:26 (51848): Can't acquire lockfile (32) - waiting 35s
09:08:01 (51848): Can't acquire lockfile (32) - exiting
09:08:01 (51848): Error: The process cannot access the file because it is being used by another process.
(0x20)
09:18:13 (12560): Can't acquire lockfile (32) - waiting 35s
09:18:48 (12560): Can't acquire lockfile (32) - exiting
09:18:48 (12560): Error: The process cannot access the file because it is being used by another process.
(0x20)
09:29:54 (54412): Can't acquire lockfile (32) - waiting 35s
09:30:29 (54412): Can't acquire lockfile (32) - exiting
09:30:29 (54412): Error: The process cannot access the file because it is being used by another process.
(0x20)
09:41:05 (48992): Can't acquire lockfile (32) - waiting 35s
09:41:40 (48992): Can't acquire lockfile (32) - exiting
09:41:40 (48992): Error: The process cannot access the file because it is being used by another process.
(0x20)
09:52:05 (44096): Can't acquire lockfile (32) - waiting 35s
09:52:40 (44096): Can't acquire lockfile (32) - exiting
09:52:40 (44096): Error: The process cannot access the file because it is being used by another process.
(0x20)
======================================================
DONE :: 1 starting structures 27469.4 cpu seconds
This process generated 15 decoys from 15 attempts
======================================================
BOINC :: WS_max 9.48228e+08
10:00:26 (49360): called boinc_finish(0)
Unhandled Exception Detected...
- Unhandled Exception Record -
Reason: Breakpoint Encountered (0x80000003) at address 0x00007FF9AC77AFA2
Engaging BOINC Windows Runtime Debugger...
********************
BOINC Windows Runtime Debugger Version 7.9.0
Dump Timestamp : 07/05/24 10:08:34
Install Directory : C:\Program Files\BOINC\
Data Directory : C:\ProgramData\BOINC
Project Symstore : https://boinc.bakerlab.org/rosetta/symstore
LoadLibraryA( C:\ProgramData\BOINC\dbghelp.dll ): GetLastError = 126
Loaded Library : dbghelp.dll
LoadLibraryA( C:\ProgramData\BOINC\symsrv.dll ): GetLastError = 126
LoadLibraryA( symsrv.dll ): GetLastError = 126
LoadLibraryA( C:\ProgramData\BOINC\srcsrv.dll ): GetLastError = 126
LoadLibraryA( srcsrv.dll ): GetLastError = 126
LoadLibraryA( C:\ProgramData\BOINC\version.dll ): GetLastError = 126
Loaded Library : version.dll
Debugger Engine : 4.0.5.0
Symbol Search Path: C:\ProgramData\BOINC\slots\13;C:\ProgramData\BOINC\projects\boinc.bakerlab.org_rosetta;srv*C:\ProgramData\BOINC\projects\boinc.bakerlab.org_rosetta\symbols*http://msdl.microsoft.com/download/symbols;srv*C:\ProgramData\BOINC\projects\boinc.bakerlab.org_rosetta\symbols*https://boinc.bakerlab.org/rosetta/symstore
ModLoad: 000000006a7a0000 00000000057ef000 C:\ProgramData\BOINC\projects\boinc.bakerlab.org_rosetta\rosetta_4.20_windows_x86_64.exe (-exported- Symbols Loaded)
Linked PDB Filename : C:\cygwin64\home\boinc\4.17\Rosetta\main\source\ide\VisualStudio\x64\BoincRelease\rosetta_4.20_windows_x86_64.pdb
ModLoad: 00000000aefd0000 00000000001f8000 C:\Windows\SYSTEM32\ntdll.dll (6.2.19041.4355) (-exported- Symbols Loaded)
Linked PDB Filename : ntdll.pdb
File Version : 10.0.19041.3636 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.19041.3636
ModLoad: 00000000aec60000 00000000000bd000 C:\Windows\System32\KERNEL32.DLL (6.2.19041.3636) (-exported- Symbols Loaded)
Linked PDB Filename : kernel32.pdb
File Version : 10.0.19041.3636 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.19041.3636
ModLoad: 00000000ac690000 00000000002f6000 C:\Windows\System32\KERNELBASE.dll (6.2.19041.4355) (-exported- Symbols Loaded)
Linked PDB Filename : kernelbase.pdb
File Version : 10.0.19041.3636 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.19041.3636
ModLoad: 00000000ad8e0000 000000000006b000 C:\Windows\System32\WS2_32.dll (6.2.19041.3636) (-exported- Symbols Loaded)
Linked PDB Filename : ws2_32.pdb
File Version : 10.0.19041.3636 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.19041.3636
ModLoad: 00000000ae150000 0000000000123000 C:\Windows\System32\RPCRT4.dll (6.2.19041.4355) (-exported- Symbols Loaded)
Linked PDB Filename : rpcrt4.pdb
File Version : 10.0.19041.3636 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.19041.3636
ModLoad: 00000000aed20000 000000000019f000 C:\Windows\System32\USER32.dll (6.2.19041.4474) (-exported- Symbols Loaded)
Linked PDB Filename : user32.pdb
File Version : 10.0.19041.1 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.19041.1
ModLoad: 00000000acb00000 0000000000022000 C:\Windows\System32\win32u.dll (6.2.19041.4474) (-exported- Symbols Loaded)
Linked PDB Filename : win32u.pdb
File Version : 10.0.19041.4474 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.19041.4474
ModLoad: 00000000ae280000 000000000002b000 C:\Windows\System32\GDI32.dll (6.2.19041.4474) (-exported- Symbols Loaded)
Linked PDB Filename : gdi32.pdb
File Version : 10.0.19041.4474 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.19041.4474
ModLoad: 00000000ac990000 0000000000117000 C:\Windows\System32\gdi32full.dll (6.2.19041.4474) (-exported- Symbols Loaded)
Linked PDB Filename : gdi32full.pdb
File Version : 10.0.19041.4474 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.19041.4474
ModLoad: 00000000acd20000 000000000009d000 C:\Windows\System32\msvcp_win.dll (6.2.19041.3636) (-exported- Symbols Loaded)
Linked PDB Filename : msvcp_win.pdb
File Version : 10.0.19041.3636 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.19041.3636
ModLoad: 00000000acdc0000 0000000000100000 C:\Windows\System32\ucrtbase.dll (6.2.19041.3636) (-exported- Symbols Loaded)
Linked PDB Filename : ucrtbase.pdb
File Version : 10.0.19041.3636 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.19041.3636
ModLoad: 00000000ad6d0000 00000000000b0000 C:\Windows\System32\ADVAPI32.dll (6.2.19041.4355) (-exported- Symbols Loaded)
Linked PDB Filename : advapi32.pdb
File Version : 10.0.19041.1 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.19041.1
ModLoad: 00000000aebc0000 000000000009e000 C:\Windows\System32\msvcrt.dll (7.0.19041.3636) (-exported- Symbols Loaded)
Linked PDB Filename : msvcrt.pdb
File Version : 7.0.19041.3636 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 7.0.19041.3636
ModLoad: 00000000ad100000 00000000000a0000 C:\Windows\System32\sechost.dll (6.2.19041.4355) (-exported- Symbols Loaded)
Linked PDB Filename : sechost.pdb
File Version : 10.0.19041.1 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.19041.1
ModLoad: 00000000acf70000 0000000000027000 C:\Windows\System32\bcrypt.dll (6.2.19041.3636) (-exported- Symbols Loaded)
Linked PDB Filename : bcrypt.pdb
File Version : 10.0.19041.1 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.19041.1
ModLoad: 00000000ad8b0000 000000000002f000 C:\Windows\System32\IMM32.DLL (6.2.19041.4474) (-exported- Symbols Loaded)
Linked PDB Filename : imm32.pdb
File Version : 10.0.19041.4474 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.19041.4474
ModLoad: 00000000aa410000 0000000000012000 C:\Windows\SYSTEM32\kernel.appcore.dll (6.2.19041.3758) (-exported- Symbols Loaded)
Linked PDB Filename : Kernel.Appcore.pdb
File Version : 10.0.19041.3758 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.19041.3758
ModLoad: 00000000ab7a0000 0000000000033000 C:\Windows\SYSTEM32\ntmarta.dll (6.2.19041.3636) (-exported- Symbols Loaded)
Linked PDB Filename : ntmarta.pdb
File Version : 10.0.19041.1 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.19041.1
ModLoad: 00000000a5100000 00000000001e4000 C:\Windows\SYSTEM32\dbghelp.dll (6.2.19041.3636) (-exported- Symbols Loaded)
Linked PDB Filename : dbghelp.pdb
File Version : 10.0.19041.3636 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.19041.3636
ModLoad: 00000000a56a0000 000000000000a000 C:\Windows\SYSTEM32\version.dll (6.2.19041.3636) (-exported- Symbols Loaded)
Linked PDB Filename : version.pdb
File Version : 10.0.19041.3636 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.19041.3636
ModLoad: 00000000acb30000 0000000000082000 C:\Windows\System32\bcryptPrimitives.dll (6.2.19041.3636) (-exported- Symbols Loaded)
Linked PDB Filename : bcryptprimitives.pdb
File Version : 10.0.19041.3636 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.19041.3636
*** Dump of the Process Statistics: ***
- I/O Operations Counters -
Read: 27539, Write: 263, Other 28986
- I/O Transfers Counters -
Read: 105900925, Write: 338462, Other 82660
- Paged Pool Usage -
QuotaPagedPoolUsage: 317872, QuotaPeakPagedPoolUsage: 317992
QuotaNonPagedPoolUsage: 10192, QuotaPeakNonPagedPoolUsage: 10192
- Virtual Memory Usage -
VirtualSize: 356282368, PeakVirtualSize: 955191296
- Pagefile Usage -
PagefileUsage: 356282368, PeakPagefileUsage: 356294656
- Working Set Size -
WorkingSetSize: 374329344, PeakWorkingSetSize: 374333440, PageFaultCount: 168980
*** Dump of thread ID 34272 (state: Initialized): ***
- Information -
Status: Base Priority: Normal, Priority: Normal, , Kernel Time: 0.000000, User Time: 0.000000, Wait Time: 0.000000
- Unhandled Exception Record -
Reason: Breakpoint Encountered (0x80000003) at address 0x00007FF9AC77AFA2
- Registers -
rax=0000000000000000 rbx=0000000000000001 rcx=000000006e338060 rdx=00000000f1a3f600 rsi=0000000000000000 rdi=0000000000000000
r8=00000000f1a3f600 r9=000000006e338050 r10=0000000000000001 r11=0000000000000fff r12=0000000000000000 r13=0000000000000000
r14=0000000000000000 r15=0000000000000000 rip=00000000ac77afa2 rsp=00000000f1a3f5d8 rbp=0000000000000000
cs=0033 ss=002b ds=002b es=002b fs=0053 gs=002b efl=00000246
- Callstack -
ChildEBP RetAddr Args to Child
f1a3f5d0 6ac66f1e 00000001 f1a3f600 f1a3f600 6e338050 KERNELBASE!DebugBreak+0x0
f1a3fa10 6ac67f10 00000000 00000000 00000000 00000000 rosetta_4.20_windows_x86_64!xmlParserInputRead+0x0
f1a3fc70 aec77344 00000000 00000000 00000000 00000000 rosetta_4.20_windows_x86_64!xmlParserInputRead+0x0
f1a3fca0 af0226b1 00000000 00000000 00000000 00000000 KERNEL32!BaseThreadInitThunk+0x0
f1a3fd20 00000000 00000000 00000000 00000000 00000000 ntdll!RtlUserThreadStart+0x0
*** Dump of thread ID 32761 (state: Initialized): ***
- Information -
Status: Base Priority: Normal, Priority: Unknown, , Kernel Time: 5.000000, User Time: 156250.000000, Wait Time: 1042656960.000000
- Registers -
rax=0000000000001486 rbx=0000000058854b00 rcx=0000000000000001 rdx=0000000058854b20 rsi=00000000689c0000 rdi=00000000031a1180
r8=00000000da4ff978 r9=00000000da4ffac0 r10=0000000000000000 r11=0000000000000246 r12=0000000000000000 r13=0000000000000000
r14=0000000000000000 r15=0000000000000000 rip=00000000acb0a104 rsp=00000000da4ff978 rbp=00000000da4ffac0
cs=0033 ss=002b ds=0000 es=0000 fs=0000 gs=0000 efl=00000246
- Callstack -
ChildEBP RetAddr Args to Child
da4ffac0 00000000 00000000 00000000 00000000 00000000 win32u!NtUserMsgWaitForMultipleObjectsEx+0x0
*** Dump of thread ID 31117053 (state: Unknown): ***
- Information -
Status: Base Priority: Normal, Priority: Unknown, , Kernel Time: 17179869184.000000, User Time: 21474840576.000000, Wait Time: 0.000000
- Registers -
rax=0000000000000000 rbx=0000000000000000 rcx=0000000000000000 rdx=0000000000000000 rsi=0000000000000000 rdi=0000000000000000
r8=0000000000000000 r9=0000000000000000 r10=0000000000000000 r11=0000000000000000 r12=0000000000000000 r13=0000000000000000
r14=0000000000000000 r15=0000000000000000 rip=0000000000000000 rsp=0000000000000000 rbp=0000000000000000
cs=0000 ss=0000 ds=0000 es=0000 fs=0000 gs=0000 efl=00000000
- Callstack -
ChildEBP RetAddr Args to Child
(-nosymbols- PC == 0)
00000000 00000000 00000000 00000000 00000000 00000000 !+0x0
*** Debug Message Dump ****
*** Foreground Window Data ***
Window Name :
Window Class :
Window Process ID: 0
Window Thread ID : 0
Exiting...
</stderr_txt>
]]>
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