Name | 8a_hal_l_hal_8aa_2jp5051_d95_0001_1_SAVE_ALL_OUT_2978422_139_0 |
Workunit | 1404804967 |
Created | 1 Jul 2024, 20:38:54 UTC |
Sent | 1 Jul 2024, 21:08:41 UTC |
Report deadline | 4 Jul 2024, 21:08:41 UTC |
Received | 1 Jul 2024, 21:58:09 UTC |
Server state | Over |
Outcome | Computation error |
Client state | Compute error |
Exit status | 1 (0x00000001) Unknown error code |
Computer ID | 6281899 |
Run time | 3 min 27 sec |
CPU time | 30 sec |
Validate state | Invalid |
Credit | 0.00 |
Device peak FLOPS | 4.73 GFLOPS |
Application version | Rosetta Beta v6.04 windows_x86_64 |
Peak working set size | 40.87 MB |
Peak swap size | 14.20 MB |
Peak disk usage | 0.01 MB |
<core_client_version>7.24.1</core_client_version> <![CDATA[ <message> Funci�n incorrecta. (0x1) - exit code 1 (0x1)</message> <stderr_txt> ror: cannot create ./database/scoring/weights/PPI_discrimination.wts Permission denied error: cannot create ./database/scoring/weights/mm_std.wts Permission denied error: cannot create ./database/scoring/weights/score12minpack.wts Permission denied error: cannot create ./database/scoring/weights/score0.wts_patch Permission denied error: cannot create ./database/scoring/weights/talaris2014_cst.wts Permission denied error: cannot create ./database/scoring/weights/score0_memb.wts Permission denied error: cannot create ./database/scoring/weights/small_radii.wts Permission denied error: cannot create ./database/scoring/weights/ref2015_cst.wts Permission denied error: cannot create ./database/scoring/weights/orbitals_talaris2013.wts Permission denied error: cannot create ./database/scoring/weights/mpframework_symdock_fa_2015.wts Permission denied error: cannot create ./database/scoring/weights/docking_occ_exact.wts_patch Permission denied error: cannot create ./database/scoring/weights/genpot_full_cart.wts Permission denied error: cannot create ./database/scoring/weights/mpframework_docking_fa_2015.wts Permission denied error: cannot create ./database/scoring/weights/trRosetta_cen1.wts Permission denied error: cannot create ./database/scoring/weights/mpframework_pHmode_fa_2015.wts Permission denied error: cannot create ./database/scoring/weights/enzdes.wts Permission denied error: cannot create ./database/scoring/weights/beta_genpot_cart.wts Permission denied error: cannot create ./database/scoring/weights/beta_nov15_soft.wts Permission denied error: cannot create ./database/scoring/weights/sasa_only.wts Permission denied error: cannot create ./database/scoring/weights/beta_nov15_cst.wts Permission denied error: cannot create ./database/scoring/weights/hpol_only_relaxed_set_5.wts Permission denied error: cannot create ./database/scoring/weights/occ_Hbond_sol_fitted_fast.wts_patch Permission denied error: cannot create ./database/scoring/weights/score12_full.wts Permission denied error: cannot create ./database/scoring/weights/antibody_design_talaris2013.wts Permission denied error: cannot create ./database/scoring/weights/ddg.wts Permission denied error: cannot create ./database/scoring/weights/mpdocking_cen_14-7-25_low-penalties.wts Permission denied error: cannot create ./database/scoring/weights/ligandprime.wts Permission denied error: cannot create ./database/scoring/weights/genpot_full.wts Permission denied error: cannot create ./database/scoring/weights/mpframework_smooth_fa_2012_cart.wts Permission denied error: cannot create ./database/scoring/weights/occ_Hbond_sol_fitted_talaris2013.wts_patch Permission denied error: cannot create ./database/scoring/weights/pre_talaris_2013_standard.wts Permission denied error: cannot create ./database/scoring/weights/score12.wts_patch Permission denied error: cannot create ./database/scoring/weights/covalent_labeling_fa.wts Permission denied error: cannot create ./database/scoring/weights/stepwise/rna/rna_hires_elec_dens.wts Permission denied error: cannot create ./database/scoring/weights/stepwise/rna/rna_res_level_energy_with_intra2.wts Permission denied error: cannot create ./database/scoring/weights/stepwise/rna/rna_helix.wts Permission denied error: cannot create ./database/scoring/weights/stepwise/rna/turner_no_zeros.wts Permission denied error: cannot create ./database/scoring/weights/stepwise/rna/LOG.txt Permission denied error: cannot create ./database/scoring/weights/stepwise/rna/rna_hires_elec_dens_CG2016.wts Permission denied error: cannot create ./database/scoring/weights/stepwise/rna/rna_res_level_energy7beta.wts Permission denied error: cannot create ./database/scoring/weights/stepwise/rna/rna_hires_fang_with_unfolded.wts Permission denied error: cannot create ./database/scoring/weights/stepwise/rna/rna_hires_07232011_with_intra_base_phosphate.wts Permission denied error: cannot create ./database/scoring/weights/stepwise/rna/rna_lores_for_stepwise.wts Permission denied error: cannot create ./database/scoring/weights/stepwise/rna/CD_geom_sol_rna_loop_hires_04092010.wts Permission denied error: cannot create ./database/scoring/weights/stepwise/rna/rna_hires_elec_dens_FCC2012.wts Permission denied error: cannot create ./database/scoring/weights/stepwise/rna/deprecated/rna_res_level_energy_AFKmod.wts Permission denied error: cannot create ./database/scoring/weights/stepwise/rna/deprecated/rna_res_level_energy6.wts Permission denied error: cannot create ./database/scoring/weights/stepwise/rna/deprecated/rna_res_level_energy5.wts Permission denied error: cannot create ./database/scoring/weights/stepwise/rna/rna_res_level_energy4.wts Permission denied error: cannot create ./database/scoring/weights/stepwise/rna/rna_hires_fang.wts Permission denied error: cannot create ./database/scoring/weights/stepwise/rna/rna_res_level_energy.wts Permission denied error: cannot create ./database/scoring/weights/stepwise/rna/rna_res_level_energy7alpha.wts Permission denied error: cannot create ./database/scoring/weights/stepwise/rna/turner.wts Permission denied error: cannot create ./database/scoring/weights/stepwise/rna/rna_loop_hires_04092010.wts Permission denied error: cannot create ./database/scoring/weights/stepwise/rna/rna_res_level_energy_with_intra.wts Permission denied error: cannot create ./database/scoring/weights/stepwise/protein/protein_res_level_energy.wts Permission denied error: cannot create ./database/scoring/weights/stepwise/protein/pack_no_hb_env_dep.wts Permission denied error: cannot create ./database/scoring/weights/stepwise/stepwise_res_level_energy.wts Permission denied error: cannot create ./database/scoring/weights/occ_Hbond_sol_fitted.wts_patch Permission denied error: cannot create ./database/scoring/weights/score4_cenrot_cartmin.wts Permission denied error: cannot create ./database/scoring/weights/beta_genpot_cst.wts Permission denied error: cannot create ./database/scoring/weights/trRosetta_cen2.wts Permission denied error: cannot create ./database/scoring/weights/interface.wts Permission denied error: cannot create ./database/scoring/weights/score4_smooth_cart.wts Permission denied error: cannot create ./database/scoring/weights/beta_july15_cst.wts Permission denied error: cannot create ./database/scoring/weights/mm_std_fa_elec_dslf_fa13_split_unfolded.wts Permission denied error: cannot create ./database/scoring/weights/score3_smooth.wts_patch Permission denied error: cannot create ./database/scoring/weights/score1_smooth.wts Permission denied error: cannot create ./database/scoring/weights/score4_cenrot_repack.wts Permission denied error: cannot create ./database/scoring/weights/score12_justdisulfides.wts Permission denied error: cannot create ./database/scoring/weights/talaris2013_dun02.wts Permission denied error: cannot create ./database/scoring/weights/HBNet.wts Permission denied error: cannot create ./database/scoring/weights/beta_soft_rep.wts Permission denied error: cannot create ./database/scoring/weights/score1_covalentlabeling.wts_patch Permission denied error: cannot create ./database/scoring/weights/talaris2013_calibrated.wts Permission denied error: cannot create ./database/scoring/weights/score4L.wts_patch Permission denied error: cannot create ./database/scoring/weights/beta.wts Permission denied error: cannot create ./database/scoring/weights/gen_born.wts Permission denied error: cannot create ./database/scoring/weights/ref2015_cart_cst.wts Permission denied error: cannot create ./database/scoring/weights/beta_nov16_soft.wts Permission denied error: cannot create ./database/scoring/weights/beta_soft.wts Permission denied error: cannot create ./database/scoring/weights/score2_smooth.wts_patch Permission denied error: cannot create ./database/scoring/weights/ligand.wts Permission denied error: cannot create ./database/scoring/weights/latest_greatest.wts Permission denied error: cannot create ./database/scoring/weights/beta_cst.wts Permission denied error: cannot create ./database/scoring/weights/docking_min.wts_patch Permission denied error: cannot create ./database/scoring/weights/rnp_ddg_stepwise.wts Permission denied error: cannot create ./database/scoring/weights/score1_smooth.wts_patch Permission denied error: cannot create ./database/scoring/weights/score0.wts Permission denied error: cannot create ./database/scoring/weights/orbitals_dun10.wts Permission denied error: cannot create ./database/scoring/weights/make_rot_lib_orig.wts Permission denied error: cannot create ./database/scoring/weights/empty.wts Permission denied error: cannot create ./database/scoring/weights/score0_covalentlabeling.wts_patch Permission denied error: cannot create ./database/scoring/weights/rnp_ddg.wts Permission denied error: cannot create ./database/scoring/weights/talaris2013_split_unfolded.wts Permission denied error: cannot create ./database/scoring/weights/score3_memb.wts Permission denied error: cannot create ./database/scoring/weights/score12.wts Permission denied error: cannot create ./database/scoring/weights/mpframework_symdock_cen_2015.wts Permission denied error: cannot create ./database/scoring/weights/ref2015_memb.wts Permission denied error: cannot create ./database/scoring/weights/interchain_cen.wts Permission denied error: cannot create ./database/scoring/weights/soft_rep.wts Permission denied error: cannot create ./database/scoring/weights/scorefacts_cart.wts Permission denied error: cannot create ./database/scoring/weights/score12_w_corrections.wts Permission denied error: cannot create ./database/scoring/weights/beta_peptide_soft_rep_mm.wts Permission denied error: cannot create ./database/scoring/weights/hrf_ms_labeling.wts Permission denied error: cannot create ./database/scoring/weights/membrane_highres_Menv_smooth.wts Permission denied error: cannot create ./database/scoring/weights/depc_ms.wts Permission denied error: cannot create ./database/scoring/weights/score_membrane_cen.wts Permission denied error: cannot create ./database/scoring/weights/mpframework_smooth_fa_2012.wts Permission denied error: cannot create ./database/scoring/weights/mpframework_fa_2007.wts Permission denied error: cannot create ./database/scoring/weights/make_rot_lib_orig_bl_ba.wts Permission denied error: cannot create ./database/scoring/weights/mm_std_fa_elec_dslf_fa13_split_unfolded_cart.wts Permission denied error: cannot create ./database/scoring/weights/score12_cart.wts Permission denied error: cannot create ./database/scoring/weights/mm_std_cart_no_hbond.wts Permission denied error: cannot create ./database/scoring/weights/pb_elec.wts_patch Permission denied error: cannot create ./database/scoring/weights/beta_nov16_cst.wts Permission denied error: cannot create ./database/scoring/weights/muds_2021.wts Permission denied error: cannot create ./database/scoring/weights/dna.wts Permission denied error: cannot create ./database/scoring/weights/score3_smooth.wts Permission denied error: cannot create ./database/scoring/weights/score4_cenrot_desgin.wts Permission denied error: cannot create ./database/scoring/weights/membrane_highres.wts Permission denied error: cannot create ./database/scoring/weights/ProQ2.wts Permission denied error: cannot create ./database/scoring/weights/score12prime.wts Permission denied error: cannot create ./database/scoring/weights/beta_genpot_soft.wts Permission denied error: cannot create ./database/scoring/weights/allfold_soft_rep.wts Permission denied error: cannot create ./database/scoring/weights/score2_covalentlabeling.wts_patch Permission denied error: cannot create ./database/scoring/weights/orbitals.wts Permission denied error: cannot create ./database/scoring/weights/beta_nov15_cart.wts Permission denied error: cannot create ./database/scoring/weights/occ_Hbond_sol_exact_talaris2014.wts_patch Permission denied error: cannot create ./database/scoring/weights/none.wts Permission denied error: cannot create ./database/scoring/weights/beta_nov15.wts Permission denied error: cannot create ./database/scoring/weights/loop_fragsample.wts Permission denied error: cannot create ./database/scoring/weights/score5_memb.wts Permission denied error: cannot create ./database/scoring/weights/mpdocking_cen_14-7-23_no-penalties.wts Permission denied error: cannot create ./database/scoring/weights/membrane_penalties.patch Permission denied error: cannot create ./database/scoring/weights/score_membrane.wts Permission denied error: cannot create ./database/scoring/weights/mm_std_fa_elec_dslf_fa13.wts Permission denied error: cannot create ./database/scoring/weights/cen_std.wts Permission denied error: cannot create ./database/scoring/weights/rna_minimize.wts Permission denied error: cannot create ./database/scoring/weights/score12_w_corrections.wts_patch Permission denied error: cannot create ./database/scoring/weights/soft_rep_design.wts Permission denied error: cannot create ./database/scoring/weights/ref2015_cart.wts Permission denied error: cannot create ./database/scoring/weights/occ_Hbond_sol_exact_talaris2013.wts_patch Permission denied error: cannot create ./database/scoring/weights/rna/denovo/coarse_rna.wts Permission denied error: cannot create ./database/scoring/weights/rna/denovo/rna_lores_with_rnp.wts Permission denied error: cannot create ./database/scoring/weights/rna/denovo/rna_and_rnp_vdw.wts Permission denied error: cannot create ./database/scoring/weights/rna/denovo/rna_lores_plus_hires.wts Permission denied error: cannot create ./database/scoring/weights/rna/denovo/rna_lores_with_rnp_june05.wts Permission denied error: cannot create ./database/scoring/weights/rna/denovo/rna_lores.wts Permission denied error: cannot create ./database/scoring/weights/rna/denovo/rna_hires_with_protein.wts Permission denied error: cannot create ./database/scoring/weights/rna/denovo/rna_hires_nextgen.wts Permission denied error: cannot create ./database/scoring/weights/rna/denovo/rna_hires.wts Permission denied error: cannot create ./database/scoring/weights/rna/denovo/rna_lores_with_rnp_aug.wts Permission denied error: cannot create ./database/scoring/weights/score4_smooth.wts Permission denied error: cannot create ./database/scoring/weights/talaris2013_cst.wts Permission denied error: cannot create ./database/scoring/weights/ProQM.wts Permission denied error: cannot create ./database/scoring/weights/mm_std_cart.wts Permission denied error: cannot create ./database/scoring/weights/score5_smooth.wts_patch Permission denied error: cannot create ./database/scoring/weights/score3_covalentlabeling.wts_patch Permission denied error: cannot create ./database/scoring/weights/score13.wts Permission denied error: cannot create ./database/scoring/weights/talaris2014.wts Permission denied error: cannot create ./database/scoring/weights/docking.wts_patch Permission denied error: cannot create ./database/scoring/weights/score2_memb.wts Permission denied error: cannot create ./database/scoring/weights/score13_env_hb.wts Permission denied error: cannot create ./database/scoring/weights/occ_Hbond_sol_exact__deprecated.wts_patch Permission denied error: cannot create ./database/scoring/weights/talaris2013.wts Permission denied error: cannot create ./database/scoring/weights/score1.wts Permission denied error: cannot create ./database/scoring/weights/fldsgn_cen.wts Permission denied error: cannot create ./database/scoring/weights/nv_env_design.wts Permission denied error: cannot create ./database/citations/rosetta_citations.txt Permission denied warning: set times/attribs failed for ./database/virtual_enzymes/kinases/h_sapiens/ warning: set times/attribs failed for ./database/virtual_enzymes/kinases/ warning: set times/attribs failed for ./database/virtual_enzymes/glycosyltransferases/h_sapiens/ warning: set times/attribs failed for ./database/virtual_enzymes/glycosyltransferases/c_jejuni/ warning: set times/attribs failed for ./database/virtual_enzymes/glycosyltransferases/ warning: set times/attribs failed for ./database/virtual_enzymes/N-terminal_acetyltransferases/s_solfataricus/ warning: set times/attribs failed for ./database/virtual_enzymes/N-terminal_acetyltransferases/h_sapiens/ warning: set times/attribs failed for ./database/virtual_enzymes/N-terminal_acetyltransferases/ warning: set times/attribs failed for ./database/virtual_enzymes/DNA_methyltransferases/h_sapiens/ warning: set times/attribs failed for ./database/virtual_enzymes/DNA_methyltransferases/ warning: set times/attribs failed for ./database/virtual_enzymes/ warning: set times/attribs failed for ./database/utilities/ warning: set times/attribs failed for ./database/symmetry/cyclic/ warning: set times/attribs failed for ./database/symmetry/ warning: set times/attribs failed for ./database/sequence/tcell_ep_9mers/ warning: set times/attribs failed for ./database/sequence/substitution_matrix/ warning: set times/attribs failed for ./database/sequence/mhc_rank_svm_scores/ warning: set times/attribs failed for ./database/sequence/mhc_pssms/ warning: set times/attribs failed for ./database/sequence/ warning: set times/attribs failed for ./database/scoring/weights/stepwise/rna/deprecated/ warning: set times/attribs failed for ./database/scoring/weights/stepwise/rna/ warning: set times/attribs failed for ./database/scoring/weights/stepwise/protein/ warning: set times/attribs failed for ./database/scoring/weights/stepwise/ warning: set times/attribs failed for ./database/scoring/weights/rna/denovo/ warning: set times/attribs failed for ./database/scoring/weights/rna/ warning: set times/attribs failed for ./database/scoring/weights/ warning: set times/attribs failed for ./database/scoring/sucker/ warning: set times/attribs failed for ./database/scoring/score_functions/unfolded/ warning: set times/attribs failed for ./database/scoring/score_functions/split_unfolded/ warning: set times/attribs failed for ./database/scoring/score_functions/sc/ warning: set times/attribs failed for ./database/scoring/score_functions/saxs/ warning: set times/attribs failed for ./database/scoring/score_functions/rama/shapovalov/kappa75/ warning: set times/attribs failed for ./database/scoring/score_functions/rama/shapovalov/kappa50/ warning: set times/attribs failed for ./database/scoring/score_functions/rama/shapovalov/kappa37.5/ warning: set times/attribs failed for ./database/scoring/score_functions/rama/shapovalov/kappa25/ warning: set times/attribs failed for ./database/scoring/score_functions/rama/shapovalov/ warning: set times/attribs failed for ./database/scoring/score_functions/rama/oligourea/ warning: set times/attribs failed for ./database/scoring/score_functions/rama/n_methyl/ warning: set times/attribs failed for ./database/scoring/score_functions/rama/flat/ warning: set times/attribs failed for ./database/scoring/score_functions/rama/fd_beta_nov2016/ warning: set times/attribs failed for ./database/scoring/score_functions/rama/fd/ warning: set times/attribs failed for ./database/scoring/score_functions/rama/beta_aa/ warning: set times/attribs failed for ./database/scoring/score_functions/rama/aramid/ warning: set times/attribs failed for ./database/scoring/score_functions/rama/alpha_ncaa/ warning: set times/attribs failed for ./database/scoring/score_functions/rama/ warning: set times/attribs failed for ./database/scoring/score_functions/pointwater/norm_trunc6/ warning: set times/attribs failed for ./database/scoring/score_functions/pointwater/ warning: set times/attribs failed for ./database/scoring/score_functions/orbitals/ warning: set times/attribs failed for ./database/scoring/score_functions/omega/ warning: set times/attribs failed for ./database/scoring/score_functions/netcharge/ warning: set times/attribs failed for ./database/scoring/score_functions/mhc_epitope/ warning: set times/attribs failed for ./database/scoring/score_functions/lipid_orientation/ warning: set times/attribs failed for ./database/scoring/score_functions/hbonds/sp2_params/ warning: set times/attribs failed for ./database/scoring/score_functions/hbonds/sp2_elec_params/ warning: set times/attribs failed for ./database/scoring/score_functions/hbonds/score12_params/ warning: set times/attribs failed for ./database/scoring/score_functions/hbonds/ref2015_params/ warning: set times/attribs failed for ./database/scoring/score_functions/hbonds/no_lr_params/ warning: set times/attribs failed for ./database/scoring/score_functions/hbonds/newOH_params/ warning: set times/attribs failed for ./database/scoring/score_functions/hbonds/newCHI_params/ warning: set times/attribs failed for ./database/scoring/score_functions/hbonds/helix_hb_06_2009/ warning: set times/attribs failed for ./database/scoring/score_functions/hbonds/extended_BAH_params/ warning: set times/attribs failed for ./database/scoring/score_functions/hbonds/experimental_params/ warning: set times/attribs failed for ./database/scoring/score_functions/hbonds/correct_params/ warning: set times/attribs failed for ./database/scoring/score_functions/hbonds/correct_no_lr_params/ warning: set times/attribs failed for ./database/scoring/score_functions/hbonds/OLF_params_4/ warning: set times/attribs failed for ./database/scoring/score_functions/hbonds/His_Phil_fix/ warning: set times/attribs failed for ./database/scoring/score_functions/hbonds/BBasSC_params/ warning: set times/attribs failed for ./database/scoring/score_functions/hbonds/ warning: set times/attribs failed for ./database/scoring/score_functions/goap/ warning: set times/attribs failed for ./database/scoring/score_functions/generic_potential/ warning: set times/attribs failed for ./database/scoring/score_functions/facts/test/ warning: set times/attribs failed for ./database/scoring/score_functions/facts/modified/ warning: set times/attribs failed for ./database/scoring/score_functions/facts/eff/ warning: set times/attribs failed for ./database/scoring/score_functions/facts/ warning: set times/attribs failed for ./database/scoring/score_functions/etable/ warning: set times/attribs failed for ./database/scoring/score_functions/envsmooth/ warning: set times/attribs failed for ./database/scoring/score_functions/disulfides/ warning: set times/attribs failed for ./database/scoring/score_functions/custom_pair_distance/ warning: set times/attribs failed for ./database/scoring/score_functions/centroid_smooth/ warning: set times/attribs failed for ./database/scoring/score_functions/carbon_hbond/ warning: set times/attribs failed for ./database/scoring/score_functions/carbohydrates/ warning: set times/attribs failed for ./database/scoring/score_functions/bondlength_bondangle_talaris/ warning: set times/attribs failed for ./database/scoring/score_functions/bondlength_bondangle_beta/ warning: set times/attribs failed for ./database/scoring/score_functions/bondlength_bondangle/ warning: set times/attribs failed for ./database/scoring/score_functions/aa_repeat_energy/ warning: set times/attribs failed for ./database/scoring/score_functions/aa_composition/ warning: set times/attribs failed for ./database/scoring/score_functions/SurfacePotential/ warning: set times/attribs failed for ./database/scoring/score_functions/SecondaryStructurePotential/ warning: set times/attribs failed for ./database/scoring/score_functions/PairEPotential/ warning: set times/attribs failed for ./database/scoring/score_functions/P_AA_pp/shapovalov/2.5deg/kappa50/ warning: set times/attribs failed for ./database/scoring/score_functions/P_AA_pp/shapovalov/2.5deg/kappa131/ warning: set times/attribs failed for ./database/scoring/score_functions/P_AA_pp/shapovalov/2.5deg/ warning: set times/attribs failed for ./database/scoring/score_functions/P_AA_pp/shapovalov/10deg/kappa50/ warning: set times/attribs failed for ./database/scoring/score_functions/P_AA_pp/shapovalov/10deg/kappa131/ warning: set times/attribs failed for ./database/scoring/score_functions/P_AA_pp/shapovalov/10deg/ warning: set times/attribs failed for ./database/scoring/score_functions/P_AA_pp/shapovalov/ warning: set times/attribs failed for ./database/scoring/score_functions/P_AA_pp/ warning: set times/attribs failed for ./database/scoring/score_functions/P_AA_SS_cen6/ warning: set times/attribs failed for ./database/scoring/score_functions/NV/ warning: set times/attribs failed for ./database/scoring/score_functions/MembranePotential/ warning: set times/attribs failed for ./database/scoring/score_functions/InterchainPotential/ warning: set times/attribs failed for ./database/scoring/score_functions/EnvPairPotential/ warning: set times/attribs failed for ./database/scoring/score_functions/DDPscore/ warning: set times/attribs failed for ./database/scoring/score_functions/ warning: set times/attribs failed for ./database/scoring/sasa_scores/ warning: set times/attribs failed for ./database/scoring/rosettaholes/ warning: set times/attribs failed for ./database/scoring/qsar/weights/ warning: set times/attribs failed for ./database/scoring/qsar/ warning: set times/attribs failed for ./database/scoring/nmr/spinlabel/ warning: set times/attribs failed for ./database/scoring/nmr/ warning: set times/attribs failed for ./database/scoring/epr_deer/ warning: set times/attribs failed for ./database/scoring/electron_density/ warning: set times/attribs failed for ./database/scoring/dna/ warning: set times/attribs failed for ./database/scoring/dfire/ warning: set times/attribs failed for ./database/scoring/constraints/ warning: set times/attribs failed for ./database/scoring/ProQ/ warning: set times/attribs failed for ./database/scoring/AtomVDW/ warning: set times/attribs failed for ./database/scoring/ warning: set times/attribs failed for ./database/sampling/waterrots/ warning: set times/attribs failed for ./database/sampling/ss_fragfiles/ warning: set times/attribs failed for ./database/sampling/spheres/ warning: set times/attribs failed for ./database/sampling/relax_scripts/ warning: set times/attribs failed for ./database/sampling/orientations/orientgridall/data/ warning: set times/attribs failed for ./database/sampling/orientations/orientgridall/ warning: set times/attribs failed for ./database/sampling/orientations/ warning: set times/attribs failed for ./database/sampling/fragpicker_rama_tables/ warning: set times/attribs failed for ./database/sampling/cen_relax/ warning: set times/attribs failed for ./database/sampling/branch_angle/ warning: set times/attribs failed for ./database/sampling/ warning: set times/attribs failed for ./database/rotamer/shapovalov/StpDwn_0-0-0/ warning: set times/attribs failed for ./database/rotamer/shapovalov/ warning: set times/attribs failed for ./database/rotamer/peptoid_rotlibs/ warning: set times/attribs failed for ./database/rotamer/ncaa_rotlibs/ncaa_rotamer_libraries/oligourea/ warning: set times/attribs failed for ./database/rotamer/ncaa_rotlibs/ncaa_rotamer_libraries/n_methyl_amino_acid/ warning: set times/attribs failed for ./database/rotamer/ncaa_rotlibs/ncaa_rotamer_libraries/beta_amino_acid/ warning: set times/attribs failed for ./database/rotamer/ncaa_rotlibs/ncaa_rotamer_libraries/alpha_amino_acid/ warning: set times/attribs failed for ./database/rotamer/ncaa_rotlibs/ncaa_rotamer_libraries/ warning: set times/attribs failed for ./database/rotamer/ncaa_rotlibs/ warning: set times/attribs failed for ./database/rotamer/dna/ warning: set times/attribs failed for ./database/rotamer/corrections_conway2016/ warning: set times/attribs failed for ./database/rotamer/beta_nov2016/ warning: set times/attribs failed for ./database/rotamer/ExtendedOpt1-5/ warning: set times/attribs failed for ./database/rotamer/ warning: set times/attribs failed for ./database/protocol_data/tensorflow_graphs/tensorflow_graph_repo_submodule/ warning: set times/attribs failed for ./database/protocol_data/tensorflow_graphs/smart_annealer/generation2/variables/ warning: set times/attribs failed for ./database/protocol_data/tensorflow_graphs/smart_annealer/generation2/assets/ warning: set times/attribs failed for ./database/protocol_data/tensorflow_graphs/smart_annealer/generation2/ warning: set times/attribs failed for ./database/protocol_data/tensorflow_graphs/smart_annealer/generation1/variables/ warning: set times/attribs failed for ./database/protocol_data/tensorflow_graphs/smart_annealer/generation1/assets/ warning: set times/attribs failed for ./database/protocol_data/tensorflow_graphs/smart_annealer/generation1/ warning: set times/attribs failed for ./database/protocol_data/tensorflow_graphs/smart_annealer/debug/variables/ warning: set times/attribs failed for ./database/protocol_data/tensorflow_graphs/smart_annealer/debug/assets/ warning: set times/attribs failed for ./database/protocol_data/tensorflow_graphs/smart_annealer/debug/ warning: set times/attribs failed for ./database/protocol_data/tensorflow_graphs/smart_annealer/ warning: set times/attribs failed for ./database/protocol_data/tensorflow_graphs/peptide_fold_propensity/ warning: set times/attribs failed for ./database/protocol_data/tensorflow_graphs/gcn_test_model/variables/ warning: set times/attribs failed for ./database/protocol_data/tensorflow_graphs/gcn_test_model/ warning: set times/attribs failed for ./database/protocol_data/tensorflow_graphs/ warning: set times/attribs failed for ./database/protocol_data/generalizedKIC/bin_params/ warning: set times/attribs failed for ./database/protocol_data/generalizedKIC/ warning: set times/attribs failed for ./database/protocol_data/denovo_design/ warning: set times/attribs failed for ./database/protocol_data/crick_parameters/ warning: set times/attribs failed for ./database/protocol_data/SDE/ warning: set times/attribs failed for ./database/protocol_data/ warning: set times/attribs failed for ./database/membrane/ warning: set times/attribs failed for ./database/input_output/3-letter_codes/ warning: set times/attribs failed for ./database/input_output/ warning: set times/attribs failed for ./database/gpu/ warning: set times/attribs failed for ./database/external/SPARTA+/tab/errorSurface/N/ warning: set times/attribs failed for ./database/external/SPARTA+/tab/errorSurface/HN/ warning: set times/attribs failed for ./database/external/SPARTA+/tab/errorSurface/HA/ warning: set times/attribs failed for ./database/external/SPARTA+/tab/errorSurface/CB/ warning: set times/attribs failed for ./database/external/SPARTA+/tab/errorSurface/CA/ warning: set times/attribs failed for ./database/external/SPARTA+/tab/errorSurface/C/ warning: set times/attribs failed for ./database/external/SPARTA+/tab/errorSurface/ warning: set times/attribs failed for ./database/external/SPARTA+/tab/ warning: set times/attribs failed for ./database/external/SPARTA+/ warning: set times/attribs failed for ./database/external/ warning: set times/attribs failed for ./database/citations/ warning: set times/attribs failed for ./database/chemical/ring_conformer_sets/fd_alternate/ warning: set times/attribs failed for ./database/chemical/ring_conformer_sets/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/residue_types/water/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/residue_types/terpenes/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/residue_types/terminal/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/residue_types/staple/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/residue_types/spin_labels/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/residue_types/sidechain_conjugation/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/residue_types/rosetta_specific/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/residue_types/ptm-caa/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/residue_types/protonation_states/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/residue_types/pna/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/residue_types/peptoids/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/residue_types/nucleic/rna_phenix/ideal_geometry/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/residue_types/nucleic/rna_phenix/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/residue_types/nucleic/rna_nonnatural/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/residue_types/nucleic/rna_legacy/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/residue_types/nucleic/dna/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/residue_types/nucleic/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/residue_types/mineral_surface/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/residue_types/metal_ions/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/residue_types/metal_binding_ncaa/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/residue_types/membrane/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/residue_types/lipids/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/residue_types/l-ncaa/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/residue_types/l-caa/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/residue_types/gamma-peptide/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/residue_types/extra/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/residue_types/cyclosporin/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/residue_types/crosslinker/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/residue_types/coenzymes/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/residue_types/carbohydrates/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/residue_types/beta-peptide/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/residue_types/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/patches/water/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/patches/terpenes/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/patches/nucleic/rna/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/patches/nucleic/dna/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/patches/nucleic/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/patches/carbohydrates/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/patches/branching/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/patches/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/metapatches/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_talaris/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_pre_talaris2013/residue_types/water/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_pre_talaris2013/residue_types/staple/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_pre_talaris2013/residue_types/spin_labels/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_pre_talaris2013/residue_types/sidechain_conjugation/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_pre_talaris2013/residue_types/rosetta_specific/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_pre_talaris2013/residue_types/ptm-caa/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_pre_talaris2013/residue_types/protonation_states/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_pre_talaris2013/residue_types/peptoids/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_pre_talaris2013/residue_types/nucleic/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_pre_talaris2013/residue_types/mineral_surface/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_pre_talaris2013/residue_types/metal_ions/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_pre_talaris2013/residue_types/l-ncaa/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_pre_talaris2013/residue_types/l-caa/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_pre_talaris2013/residue_types/carbohydrates/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_pre_talaris2013/residue_types/beta-peptide/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_pre_talaris2013/residue_types/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_pre_talaris2013/patches/carbohydrates/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_pre_talaris2013/patches/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_pre_talaris2013/metapatches/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_pre_talaris2013/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_05.2009_icoor/residue_types_HOMOGENEOUS/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_05.2009_icoor/residue_types/metal_ions/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_05.2009_icoor/residue_types/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_05.2009_icoor/patches/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_05.2009_icoor/metapatches/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard_05.2009_icoor/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/water/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/terpenes/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/terminal/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/staple/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/spin_labels/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/sidechain_conjugation/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/rosetta_specific/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/ptm-caa/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/protonation_states/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/polyaramids/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/pna/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/peptoids/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/oligourea/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/nucleic/tna/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/nucleic/rna_phenix/ideal_geometry/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/nucleic/rna_phenix/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/nucleic/rna_nonnatural/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/nucleic/rna_legacy/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/nucleic/dna_nonnatural/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/nucleic/dna/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/nucleic/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/mineral_surface/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/metal_ions/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/metal_binding_ncaa/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/membrane/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/lipids/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/l-ncaa/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/l-caa/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/gamma-peptide/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/extra/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/cyclosporin/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/crosslinker/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/coenzymes/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/ketoses/trioses/dihydroxyacetones/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/ketoses/trioses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/ketoses/tetroses/erythruloses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/ketoses/tetroses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/ketoses/pentoses/xyluloses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/ketoses/pentoses/ribuloses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/ketoses/pentoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/ketoses/octoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/ketoses/nonoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/ketoses/hexoses/tagatoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/ketoses/hexoses/sorboses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/ketoses/hexoses/psicoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/ketoses/hexoses/fructoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/ketoses/hexoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/ketoses/heptoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/ketoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/trioses/glyceraldehydes/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/trioses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/tetroses/threoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/tetroses/erythroses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/tetroses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/pentoses/xyloses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/pentoses/riboses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/pentoses/lyxoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/pentoses/arabinoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/pentoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/taloses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/mannoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/idoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/guloses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/glucoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/galactoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/altroses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/alloses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/hexoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/aldoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/carbohydrates/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/beta-peptide/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/anions/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/achiral_ncaa/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/residue_types/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/patches/water/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/patches/terpenes/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/patches/nucleic/rna/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/patches/nucleic/dna/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/patches/nucleic/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/patches/metals/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/patches/coenzymes/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/patches/carbohydrates/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/patches/branching/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/patches/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/metapatches/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/fa_standard/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/coarse_two_bead/residue_types/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/coarse_two_bead/patches/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/coarse_two_bead/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/coarse_rna/residue_types/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/coarse_rna/patches/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/coarse_rna/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid_rot/residue_types/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid_rot/patches/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid_rot/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid_pre_talaris2013/residue_types/metal_ions/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid_pre_talaris2013/residue_types/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid_pre_talaris2013/patches/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid_pre_talaris2013/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/staple/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/rosetta_specific/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/nucleic/rna_phenix/ideal_geometry/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/nucleic/rna_phenix/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/nucleic/dna/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/nucleic/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/metal_ions/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/membrane/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/lipids/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/l-ncaa/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/l-caa/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/extra/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/coenzymes/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/ketoses/trioses/dihydroxyacetones/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/ketoses/trioses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/ketoses/tetroses/erythruloses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/ketoses/tetroses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/ketoses/pentoses/xyluloses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/ketoses/pentoses/ribuloses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/ketoses/pentoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/ketoses/octoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/ketoses/nonoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/ketoses/hexoses/tagatoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/ketoses/hexoses/sorboses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/ketoses/hexoses/psicoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/ketoses/hexoses/fructoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/ketoses/hexoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/ketoses/heptoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/ketoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/aldoses/trioses/glyceraldehydes/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/aldoses/trioses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/aldoses/tetroses/threoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/aldoses/tetroses/erythroses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/aldoses/tetroses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/aldoses/pentoses/xyloses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/aldoses/pentoses/riboses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/aldoses/pentoses/lyxoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/aldoses/pentoses/arabinoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/aldoses/pentoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/aldoses/hexoses/taloses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/aldoses/hexoses/mannoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/aldoses/hexoses/idoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/aldoses/hexoses/guloses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/aldoses/hexoses/glucoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/aldoses/hexoses/galactoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/aldoses/hexoses/altroses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/aldoses/hexoses/alloses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/aldoses/hexoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/aldoses/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/carbohydrates/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/achiral_ncaa/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/residue_types/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/patches/nucleic/rna/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/patches/nucleic/dna/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/patches/nucleic/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/patches/carbohydrates/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/patches/branching/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/patches/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/metapatches/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/centroid/ warning: set times/attribs failed for ./database/chemical/residue_type_sets/ warning: set times/attribs failed for ./database/chemical/pdb_components/override/ warning: set times/attribs failed for ./database/chemical/pdb_components/ warning: set times/attribs failed for ./database/chemical/orbital_type_sets/fa_standard/ warning: set times/attribs failed for ./database/chemical/orbital_type_sets/ warning: set times/attribs failed for ./database/chemical/mm_atom_type_sets/fa_standard/ warning: set times/attribs failed for ./database/chemical/mm_atom_type_sets/ warning: set times/attribs failed for ./database/chemical/gasteiger/default/ warning: set times/attribs failed for ./database/chemical/gasteiger/ warning: set times/attribs failed for ./database/chemical/element_sets/default/ warning: set times/attribs failed for ./database/chemical/element_sets/ warning: set times/attribs failed for ./database/chemical/csd_atom_type_sets/fa_standard/ warning: set times/attribs failed for ./database/chemical/csd_atom_type_sets/ warning: set times/attribs failed for ./database/chemical/carbohydrates/linkage_conformers/ warning: set times/attribs failed for ./database/chemical/carbohydrates/common_glycans/ warning: set times/attribs failed for ./database/chemical/carbohydrates/ warning: set times/attribs failed for ./database/chemical/atom_type_sets/fa_standard_talaris/extras/ warning: set times/attribs failed for ./database/chemical/atom_type_sets/fa_standard_talaris/ warning: set times/attribs failed for ./database/chemical/atom_type_sets/fa_standard_genpot/extras/ warning: set times/attribs failed for ./database/chemical/atom_type_sets/fa_standard_genpot/ warning: set times/attribs failed for ./database/chemical/atom_type_sets/fa_standard/extras/ warning: set times/attribs failed for ./database/chemical/atom_type_sets/fa_standard/ warning: set times/attribs failed for ./database/chemical/atom_type_sets/coarse_two_bead/ warning: set times/attribs failed for ./database/chemical/atom_type_sets/coarse_rna/ warning: set times/attribs failed for ./database/chemical/atom_type_sets/centroid_rot/ warning: set times/attribs failed for ./database/chemical/atom_type_sets/centroid_min/ warning: set times/attribs failed for ./database/chemical/atom_type_sets/centroid/ warning: set times/attribs failed for ./database/chemical/atom_type_sets/ warning: set times/attribs failed for ./database/chemical/amoeba/ warning: set times/attribs failed for ./database/chemical/ warning: set times/attribs failed for ./database/additional_protocol_data/ warning: set times/attribs failed for ./database/ Using database: database\ error: cannot create ./native.pdb Permission denied error: cannot create ./seq.txt Permission denied ERROR: Unable to open file: database\chemical/residue_type_sets/fa_standard/residue_types.txt ERROR:: Exit from: src/core/chemical/GlobalResidueTypeSet.cc line: 145 BOINC:: Error reading and gzipping output datafile: default.out 23:52:13 (21764): called boinc_finish(1) </stderr_txt> ]]>
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