Task 1577860704

Name RosettaVS_SAVE_ALL_OUT_NOJRAN_ctps_boinc_fulldb_IGNORE_THE_REST_yPIxHW_9_374_2978453_3_0
Workunit 1404197047
Created 28 Jun 2024, 18:52:41 UTC
Sent 28 Jun 2024, 19:36:58 UTC
Report deadline 1 Jul 2024, 19:36:58 UTC
Received 29 Jun 2024, 3:46:39 UTC
Server state Over
Outcome Computation error
Client state Compute error
Exit status 11 (0x0000000B) Unknown error code
Computer ID 6287216
Run time 6 hours 58 min 26 sec
CPU time 6 hours 58 min 14 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 6.89 GFLOPS
Application version Rosetta Beta v6.05
x86_64-pc-linux-gnu
Peak working set size 1,481.05 MB
Peak swap size 1,619.41 MB
Peak disk usage 24.88 MB

Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<message>
process got signal 11</message>
<stderr_txt>
command: ../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.05_x86_64-pc-linux-gnu @ctps_boinc_fulldb_yPIxHW_9_374.flags -nstruct 10000 -cpu_run_time 28800 -boinc:max_nstruct 20000 -checkpoint_interval 120 -mute all -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -boinc::cpu_run_timeout 36000 -run::rng mt19937
Using database: database_0f7f01a1b07/database
Starting watchdog...
Watchdog active.

[ ERROR ]: Caught exception:


File: src/core/kinematics/Stub.cc:106
Error in Stub::from_four_points(): 

File: src/numeric/xyzVector.hh:654
Cannot create normalized xyzVector from vector of length() zero.  Error occurred when trying to normalize the vector between points A and B.  A=[-90586705525865225815498686464.000000,26398097481527485039512649728.000000,242696113640410543233158873088.000000], B=[-90586705525865225815498686464.000000,26398097481527485039512649728.000000,242696113640410543233158873088.000000].
 ------------------------ Begin developer's backtrace ------------------------- 
BACKTRACE:
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.05_x86_64-pc-linux-gnu(+0x84c4b24) [0x5610ca893b24]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.05_x86_64-pc-linux-gnu(+0x84dd6f4) [0x5610ca8ac6f4]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.05_x86_64-pc-linux-gnu(+0xbf321d) [0x5610c2fc221d]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.05_x86_64-pc-linux-gnu(+0x757068f) [0x5610c993f68f]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.05_x86_64-pc-linux-gnu(+0x758231f) [0x5610c995131f]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.05_x86_64-pc-linux-gnu(+0x325c1ab) [0x5610c562b1ab]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.05_x86_64-pc-linux-gnu(+0x61b7772) [0x5610c8586772]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.05_x86_64-pc-linux-gnu(+0x5a67b4e) [0x5610c7e36b4e]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.05_x86_64-pc-linux-gnu(+0x5a6e0d5) [0x5610c7e3d0d5]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.05_x86_64-pc-linux-gnu(+0x322807e) [0x5610c55f707e]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.05_x86_64-pc-linux-gnu(+0x314a464) [0x5610c5519464]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.05_x86_64-pc-linux-gnu(+0x315739c) [0x5610c552639c]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.05_x86_64-pc-linux-gnu(+0x315d12c) [0x5610c552c12c]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.05_x86_64-pc-linux-gnu(+0x577cdc1) [0x5610c7b4bdc1]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.05_x86_64-pc-linux-gnu(+0x577d49e) [0x5610c7b4c49e]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.05_x86_64-pc-linux-gnu(+0x577da0e) [0x5610c7b4ca0e]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.05_x86_64-pc-linux-gnu(+0x577ec46) [0x5610c7b4dc46]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.05_x86_64-pc-linux-gnu(+0x54de7aa) [0x5610c78ad7aa]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.05_x86_64-pc-linux-gnu(+0x54dfcce) [0x5610c78aecce]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.05_x86_64-pc-linux-gnu(+0x57e1247) [0x5610c7bb0247]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.05_x86_64-pc-linux-gnu(+0x57dfc0a) [0x5610c7baec0a]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.05_x86_64-pc-linux-gnu(+0xcce7a3) [0x5610c309d7a3]
/lib/x86_64-linux-gnu/libc.so.6(+0x2724a) [0x7f861736724a]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7f8617367305]
../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.05_x86_64-pc-linux-gnu(+0xf0f59a) [0x5610c32de59a]
 ------------------------- End developer's backtrace -------------------------- 

</stderr_txt>
]]>




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