Task 1575918085
| Name | rb_06_21_621089_615108_ab_t000__robetta_cstwt_5.0_FT_IGNORE_THE_REST_05_08_2978402_83_0 |
| Workunit | 1402387044 |
| Created | 21 Jun 2024, 14:59:44 UTC |
| Sent | 21 Jun 2024, 15:05:09 UTC |
| Report deadline | 24 Jun 2024, 15:05:09 UTC |
| Received | 23 Jun 2024, 15:03:21 UTC |
| Server state | Over |
| Outcome | Computation error |
| Client state | Compute error |
| Exit status | 1 (0x00000001) Unknown error code |
| Computer ID | 6161741 |
| Run time | 1 hours 29 min 30 sec |
| CPU time | 1 hours 27 min 6 sec |
| Validate state | Invalid |
| Credit | 0.00 |
| Device peak FLOPS | 4.82 GFLOPS |
| Application version | Rosetta v4.20 x86_64-apple-darwin |
| Peak working set size | 482.90 MB |
| Peak swap size | 38,643.63 MB |
| Peak disk usage | 25.76 MB |
Stderr output
<core_client_version>7.16.19</core_client_version> <![CDATA[ <message> process exited with code 1 (0x1, -255)</message> <stderr_txt> command: rosetta_4.20_x86_64-apple-darwin @rb_06_21_621089_615108_ab_t000__robetta_FLAGS -in::file::fasta t000_.fasta -jumps:pairing_file t000_.fasta.bbcontacts.jumps -jumps:random_sheets 1 1 -constraints::cst_file t000_.fasta.CB.cst -constraints:cst_weight 5.0 -constraints::cst_fa_file t000_.fasta.MIN.cst -constraints:cst_fa_weight 5.0 -in:file:boinc_wu_zip rb_06_21_621089_615108_ab_t000__robetta.zip -frag3 rb_06_21_621089_615108_ab_t000__robetta.200.3mers.index.gz -fragA rb_06_21_621089_615108_ab_t000__robetta.200.8mers.index.gz -fragB rb_06_21_621089_615108_ab_t000__robetta.200.5mers.index.gz -nstruct 10000 -cpu_run_time 28800 -boinc:max_nstruct 20000 -checkpoint_interval 120 -mute all -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -boinc::cpu_run_timeout 36000 -run::rng mt19937 -constant_seed -jran 1613532 Using database: database_357d5d93529_n_methyl/minirosetta_database [ ERROR ]: Caught exception: File: src/core/pack/dunbrack/SingleResidueDunbrackLibrary.hh:306 chi angle must be between -180 and 180: nan ------------------------ Begin developer's backtrace ------------------------- BACKTRACE: 0 rosetta_4.20_x86_64-apple-darwin 0x0000000106f46630 Kernel::kernel_precomputed(int, int) const + 322720 1 rosetta_4.20_x86_64-apple-darwin 0x0000000106f45eb1 Kernel::kernel_precomputed(int, int) const + 320801 2 rosetta_4.20_x86_64-apple-darwin 0x0000000105536751 core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 753137 3 rosetta_4.20_x86_64-apple-darwin 0x0000000105534b7b core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 746011 4 rosetta_4.20_x86_64-apple-darwin 0x00000001057116d6 core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 2698614 5 rosetta_4.20_x86_64-apple-darwin 0x0000000105500f18 core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 533944 6 rosetta_4.20_x86_64-apple-darwin 0x0000000105d7a1e6 boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, core::pose::Pose, core::conformation::signals::XYZEvent const&>, boost::_bi::list2<boost::_bi::value<core::pose::Pose*>, boost::arg<1> > >, void, core::conformation::signals::XYZEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::XYZEvent) + 1754614 7 rosetta_4.20_x86_64-apple-darwin 0x0000000105e17bc6 core::scoring::compare_by_abs(void const*, void const*) + 306326 8 rosetta_4.20_x86_64-apple-darwin 0x0000000105e119aa core::scoring::compare_by_abs(void const*, void const*) + 281210 9 rosetta_4.20_x86_64-apple-darwin 0x000000010547ad53 boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::moves::PyMOLObserver, core::pose::signals::ConformationEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::moves::PyMOLObserver*>, boost::arg<1> > >, void, core::pose::signals::ConformationEvent>::invoke(boost::detail::function::function_buffer&, core::pose::signals::ConformationEvent) + 2466403 10 rosetta_4.20_x86_64-apple-darwin 0x00000001054834b7 core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 19287 11 rosetta_4.20_x86_64-apple-darwin 0x0000000105483121 core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 18369 12 rosetta_4.20_x86_64-apple-darwin 0x000000010548bc7e core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 54046 13 rosetta_4.20_x86_64-apple-darwin 0x0000000105486925 core::optimization::EItem::sort_R_function(core::optimization::EItem const&, core::optimization::EItem const&) + 32709 14 rosetta_4.20_x86_64-apple-darwin 0x000000010547831e boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::moves::PyMOLObserver, core::pose::signals::ConformationEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::moves::PyMOLObserver*>, boost::arg<1> > >, void, core::pose::signals::ConformationEvent>::invoke(boost::detail::function::function_buffer&, core::pose::signals::ConformationEvent) + 2455598 15 rosetta_4.20_x86_64-apple-darwin 0x0000000104b8ef14 boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1> > >, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 7259236 16 rosetta_4.20_x86_64-apple-darwin 0x0000000104b8eac2 boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1> > >, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 7258130 17 rosetta_4.20_x86_64-apple-darwin 0x0000000104b8f19d boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1> > >, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 7259885 18 rosetta_4.20_x86_64-apple-darwin 0x0000000104751013 boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1> > >, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 2811235 19 rosetta_4.20_x86_64-apple-darwin 0x000000010475238b boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1> > >, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 2816219 20 rosetta_4.20_x86_64-apple-darwin 0x00000001047548ad boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1> > >, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 2825725 21 rosetta_4.20_x86_64-apple-darwin 0x000000010477b65f boost::detail::function::void_function_obj_invoker1<boost::_bi::bind_t<void, boost::_mfi::mf1<void, protocols::forge::build::BuildInstruction, core::conformation::signals::LengthEvent const&>, boost::_bi::list2<boost::_bi::value<protocols::forge::build::BuildInstruction*>, boost::arg<1> > >, void, core::conformation::signals::LengthEvent>::invoke(boost::detail::function::function_buffer&, core::conformation::signals::LengthEvent) + 2984879 22 rosetta_4.20_x86_64-apple-darwin 0x00000001039caea2 protocols::multistage_rosetta_scripts::cluster::complex_type_name_for_cluster_metric(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&) + 3828914 23 rosetta_4.20_x86_64-apple-darwin 0x00000001039d7226 protocols::multistage_rosetta_scripts::cluster::complex_type_name_for_cluster_metric(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&) + 3878966 24 rosetta_4.20_x86_64-apple-darwin 0x00000001039d9a5f protocols::multistage_rosetta_scripts::cluster::complex_type_name_for_cluster_metric(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&) + 3889263 25 rosetta_4.20_x86_64-apple-darwin 0x0000000102f70128 rosetta_4.20_x86_64-apple-darwin + 24872 26 dyld 0x000000020938551e start + 462 27 ??? 0x0000000000000008 0x0 + 8 ------------------------- End developer's backtrace -------------------------- </stderr_txt> ]]>
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