Posts by Dzordzik

1) Message boards : Number crunching : Rosetta 4.0+ (Message 90949)
Posted 26 Jul 2019 by Dzordzik
Post:
Hi, I'm new on this forum but want to ask developers why I get in last few days so much errors. Most of them is on 4.08 under Linux, this is my host to check, most of WU's have this error but only about 10% of all WS is invalid. Before few days only few, under 1% was invalid.

<core_client_version>7.9.3</core_client_version>
<![CDATA[
<message>
process exited with code 1 (0x1, -255)</message>
<stderr_txt>
command: ../../projects/boinc.bakerlab.org_rosetta/rosetta_4.08_x86_64-pc-linux-gnu @luosc_3His_18res-3_symm_c.200.10_0001_HDZ_3_442_0011_0001.flags -nstruct 10000 -cpu_run_time 28800 -watchdog -boinc:max_nstruct 600 -checkpoint_interval 120 -mute all -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2078213

ERROR: Error in simple_cycpep_predict app! The imported native pose has a different number of residues than the sequence provided.
ERROR:: Exit from: src/protocols/cyclic_peptide_predict/SimpleCycpepPredictApplication.cc line: 1700
BACKTRACE:
[0x5a57db6]
[0xaea70f]
[0xaea9c0]
[0xaff25b]
[0x412a94]
[0x5ff3ccc]
[0x6108e7]
BOINC:: Error reading and gzipping output datafile: default.out
19:55:39 (4350): called boinc_finish(1)

</stderr_txt>
]]>

What is wrong? My host or some error in app or in this WU's? Thank you for help, Dzordzik.






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