Posts by sergioclr

1) Message boards : Number crunching : Error while computing (Ubuntu 18.04 LTS, Boinc version 7.9.3) (Message 89548)
Posted 13 Sep 2018 by sergioclr
Post:
For the time being 2 tasks have been successfully processed and validated after including the Environment parameter as
per my last thread update.

Tasks:
fadh_9_11_db_gre_1xlattparam_1_rpce1_atpacstincr-run_0_0_X_h17_l3_h16_l3-start_0006__9.9_10_fixedLoop_0003_design_m8_fragments_abinitio_SAVE_ALL_OUT_687026_180_0
foldit_2005364_0001_fold_and_dock_SAVE_ALL_OUT_686932_487_1


Question: did someone, with the same problem (Error while computing), apply the same solution?

i appreciate any answers or comments.

Tks, Sergio.
2) Message boards : Number crunching : Error while computing (Ubuntu 18.04 LTS, Boinc version 7.9.3) (Message 89541)
Posted 12 Sep 2018 by sergioclr
Post:
Thank you for your prompt answer.

I edited /lib/systemd/system/boinc-client.service to include the Environment parameter.

[Unit]
Description=Berkeley Open Infrastructure Network Computing Client
Documentation=man:boinc(1)
After=network-online.target

[Service]
Environment=LC_ALL=C
ProtectHome=true
Type=simple
Nice=10
User=boinc
WorkingDirectory=/var/lib/boinc
ExecStart=/usr/bin/boinc
ExecStop=/usr/bin/boinccmd --quit
ExecReload=/usr/bin/boinccmd --read_cc_config
ExecStopPost=/bin/rm -f lockfile
IOSchedulingClass=idle
.
.

I stopped Boinc client, rebooted the computer and requested
2 new tasks to verify if the problem (Error while computing)
still exists after the tasks are finished.

Status: waiting for the tasks to finish execution.
3) Message boards : Number crunching : Error while computing (Ubuntu 18.04 LTS, Boinc version 7.9.3) (Message 89539)
Posted 12 Sep 2018 by sergioclr
Post:
"Error while computing" on 4 tasks. Please help. Thanks in advance.

Computer
Intel(R) Core(TM)2 Duo CPU E8500 @ 3.16GHz [Family 6 Model 23 Stepping 10]
AMD AMD TURKS (DRM 2.50.0 / 4.15.0-33-generic, LLVM 6.0.0) (2048MB) OpenCL: 1.1
Ubuntu 18.04.1 LTS [4.15.0-33-generic|libc 2.27 (Ubuntu GLIBC 2.27-3ubuntu1)]
BOINC version 7.9.3

Tasks that failed (all of them)
PF16401.4_nojmps_aivan_SAVE_ALL_OUT_03_09_686649_6570_1
Stderr output

<core_client_version>7.9.3</core_client_version>
<![CDATA[
<message>
process exited with code 193 (0xc1, -63)</message>
<stderr_txt>
command: ../../projects/boinc.bakerlab.org_rosetta/rosetta_4.07_x86_64-pc-linux-gnu @PF16401.4.nojmps.flags -in:file:boinc_wu_zip PF16401.4.nojmps.zip -nstruct 10000 -cpu_run_time 28800 -watchdog -boinc:max_nstruct 600 -checkpoint_interval 120 -mute all -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 1171180
rosetta_4.07_x86_64-pc-linux-gnu: loadlocale.c:129: _nl_intern_locale_data: Assertion `cnt < (sizeof (_nl_value_type_LC_TIME) / sizeof (_nl_value_type_LC_TIME[0]))' failed.
SIGABRT: abort called
Stack trace (17 frames):
[0x5efead0]
[0x5ffe380]
[0x607e517]
[0x60083a8]
[0x6002794]
[0x60027ee]
[0x6000f73]
[0x6001996]
[0x60007df]
[0x600020e]
[0x5f1d10e]
[0x5f1d73e]
[0x5f1707a]
[0x5f17202]
[0x412631]
[0x5fff8cc]
[0x610b97]

Exiting...

</stderr_txt>
]]>

PF14092.5_jmps_aivan_SAVE_ALL_OUT_03_09_686650_38888_0

Stderr output
<core_client_version>7.9.3</core_client_version>
<![CDATA[
<message>
process exited with code 193 (0xc1, -63)</message>
<stderr_txt>
command: ../../projects/boinc.bakerlab.org_rosetta/rosetta_4.07_x86_64-pc-linux-gnu @PF14092.5.jmps.flags -in:file:boinc_wu_zip PF14092.5.jmps.zip -nstruct 10000 -cpu_run_time 28800 -watchdog -boinc:max_nstruct 600 -checkpoint_interval 120 -mute all -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 3961113
rosetta_4.07_x86_64-pc-linux-gnu: loadlocale.c:129: _nl_intern_locale_data: Assertion `cnt < (sizeof (_nl_value_type_LC_TIME) / sizeof (_nl_value_type_LC_TIME[0]))' failed.
SIGABRT: abort called
Stack trace (17 frames):
[0x5efead0]
[0x5ffe380]
[0x607e517]
[0x60083a8]
[0x6002794]
[0x60027ee]
[0x6000f73]
[0x6001996]
[0x60007df]
[0x600020e]
[0x5f1d10e]
[0x5f1d73e]
[0x5f1707a]
[0x5f17202]
[0x412631]
[0x5fff8cc]
[0x610b97]

Exiting...

</stderr_txt>
]]>

PF11937.7_jmps_aivan_SAVE_ALL_OUT_03_09_686692_2863_0
Stderr output

<core_client_version>7.9.3</core_client_version>
<![CDATA[
<message>
couldn't start app: Input file minirosetta_database_1a38360_n_methyl.zip missing or invalid: RSA key check failed for file</message>
]]>

PF06834.10_jmps_aivan_SAVE_ALL_OUT_03_09_686470_11068_0

Stderr output
<core_client_version>7.9.3</core_client_version>
<![CDATA[
<message>
app_version download error: couldn't get input files:
<file_xfer_error>
<file_name>minirosetta_database_1a38360_n_methyl.zip</file_name>
<error_code>-120 (RSA key check failed for file)</error_code>
<error_message>signature verification failed</error_message>Tasks that failed (all of them)
</file_xfer_error>
</message>
]]>






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