Posts by ypsilon

1) Message boards : Number crunching : Problems and Technical Issues with Rosetta@home (Message 87867)
Posted 9 Dec 2017 by Profile ypsilon
Post:
I have had several of these as well. They take much longer and eventually get a comp error.
Apparently there's an emergency stop built in, 4 hours after target time.


Some of them might stop after 8 Hours, but at least on my mac there are some tasks which run longer. On may Linux machines occurred many tasks which run longer also. There I have a script to catch them. Here is a log from the last few days:

Do 30. Nov 11:00:01 CET 2017 UfA2QuiJ_fold_and_dock_SAVE_ALL_OUT_523940_1806_0 aborted
Do 30. Nov 12:50:01 CET 2017 T1wKatx0_fold_and_dock_SAVE_ALL_OUT_523844_1809_0 aborted
Do 30. Nov 22:25:01 CET 2017 ExWr3Dh9_fold_and_dock_SAVE_ALL_OUT_523951_1809_0 aborted
Fr 1. Dez 02:35:01 CET 2017 5mGIFocw_fold_and_dock_SAVE_ALL_OUT_523953_1809_0 aborted
Fr 1. Dez 13:40:01 CET 2017 KMdj0rL5_fold_and_dock_SAVE_ALL_OUT_523842_1812_0 aborted
Fr 1. Dez 17:10:02 CET 2017 5f6I1vYG_fold_and_dock_SAVE_ALL_OUT_523837_1812_0 aborted
Sa 2. Dez 18:15:01 CET 2017 vusPMBXW_fold_and_dock_SAVE_ALL_OUT_523826_1834_0 aborted
So 3. Dez 08:00:01 CET 2017 T0zUfk05_fold_and_dock_SAVE_ALL_OUT_523962_1847_0 aborted
Mo 4. Dez 11:20:01 CET 2017 qe4GEPtL_fold_and_dock_SAVE_ALL_OUT_523846_1868_0 aborted
Mo 4. Dez 23:40:01 CET 2017 EXDyYP7D_fold_and_dock_SAVE_ALL_OUT_523819_1869_1 aborted
Di 5. Dez 06:15:01 CET 2017 8res_cis_hydrophobic_nmethyl_8res_c.1.8_0001_SAVE_ALL_OUT_537824_736_0 aborted
Di 5. Dez 10:50:01 CET 2017 8res_cis_hydrophobic_nmethyl_8res_c.14.5_0001_SAVE_ALL_OUT_537819_597_0 aborted
Mi 6. Dez 02:55:01 CET 2017 WCeQrXeO_fold_and_dock_SAVE_ALL_OUT_523901_1733_1 aborted
Mi 6. Dez 08:55:02 CET 2017 XVaB0DRA_fold_and_dock_SAVE_ALL_OUT_523891_1979_0 aborted
Mi 6. Dez 13:35:01 CET 2017 A1seaa4W_fold_and_dock_SAVE_ALL_OUT_523928_1990_0 aborted
Do 7. Dez 02:30:01 CET 2017 jote4wq3_fold_and_dock_SAVE_ALL_OUT_524006_2016_0 aborted
Do 7. Dez 19:05:01 CET 2017 BiqOzAZk_fold_and_dock_SAVE_ALL_OUT_523813_2055_0 aborted
Do 7. Dez 23:00:01 CET 2017 WybJiODL_fold_and_dock_SAVE_ALL_OUT_523892_2058_0 aborted
Fr 8. Dez 03:05:01 CET 2017 XVaB0DRA_fold_and_dock_SAVE_ALL_OUT_523891_2058_0 aborted
Fr 8. Dez 07:40:01 CET 2017 9res_cis_hydrophobic_nmethyl_c.651.1_0001_SAVE_ALL_OUT_538287_42_0 aborted
Sa 9. Dez 08:10:01 CET 2017 9res_cis_hydrophobic_nmethyl_c.996.1_0001_SAVE_ALL_OUT_538294_560_0 aborted
2) Message boards : Number crunching : Problems and Technical Issues with Rosetta@home (Message 87861)
Posted 8 Dec 2017 by Profile ypsilon
Post:
I noticed the same on my Mac (10.11.6). I also noticed that the kernel task takes about 50% with this type of task and that the task runs much longer than my 4h runtime.

Here ist an example task. I aborted it after a runtime of 15:39:40
Fr 8 Dez 14:36:21 2017 | Rosetta@home | task G176481_GEO_3_1-90_TEST_v02_t000__krypton_SAVE_ALL_OUT_03_09_538050_167_1 aborted by user

this is not the only one. I noticed it a several times the last days.






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