Posts by SGAI-CSIC

1) Questions and Answers : Unix/Linux : All tasks in scheduler state uninitialized (Message 94662)
Posted 17 Apr 2020 by Profile SGAI-CSIC
Post:
Ok, thanks, I will try :-)
2) Questions and Answers : Unix/Linux : All tasks in scheduler state uninitialized (Message 94595)
Posted 16 Apr 2020 by Profile SGAI-CSIC
Post:
Thanks to all for the help, now all it's running.

Ok, I see what you say, some task demand for memory that others, for example:



Some task demand ~ 20 % of mem (1.2 GB) others less ~ 12% ( 700 MB). I understand then that in order to executing the task
boinc makes sure have enough expected memory for the sum of all tasks and if it is not fulfilled the tasks do not initialize?
3) Questions and Answers : Unix/Linux : All tasks in scheduler state uninitialized (Message 94565)
Posted 15 Apr 2020 by Profile SGAI-CSIC
Post:
That's right Mod.Sense, it seems a problem between the balance of CPU and memory, I have increased a little the RAM memory (6GB) and the task are running. I will continue to observe it ...
4) Questions and Answers : Unix/Linux : All tasks in scheduler state uninitialized (Message 94544)
Posted 15 Apr 2020 by Profile SGAI-CSIC
Post:
I think the problem it's the boinc-client in CentOS, I have created another vm with Debian installation and the task are running:

======= Tasks ========
1) -----------
   name: bhfe_s01_SAVE_ALL_OUT_IGNORE_THE_REST_1iy1rc1g_913393_2_0
   WU name: bhfe_s01_SAVE_ALL_OUT_IGNORE_THE_REST_1iy1rc1g_913393_2
   project URL: http://boinc.bakerlab.org/rosetta/
   report deadline: Sat Apr 18 16:15:23 2020
   ready to report: no
   got server ack: no
   final CPU time: 0.000000
   state: downloaded
   scheduler state: scheduled
   exit_status: 0
   signal: 0
   suspended via GUI: no
   active_task_state: EXECUTING
   app version num: 415
   checkpoint CPU time: 0.000000
   current CPU time: 21.956000
   fraction done: 0.000187
   swap size: 469 MB
   working set size: 215 MB
   estimated CPU time remaining: 21512.713905
2) -----------
   name: Junior_HalfRoid_design4_COVID-19_SAVE_ALL_OUT_IGNORE_THE_REST_6kl5yf9y_913404_1_0
   WU name: Junior_HalfRoid_design4_COVID-19_SAVE_ALL_OUT_IGNORE_THE_REST_6kl5yf9y_913404_1
   project URL: http://boinc.bakerlab.org/rosetta/
   report deadline: Sat Apr 18 16:15:34 2020
   ready to report: no
   got server ack: no
   final CPU time: 0.000000
   state: downloaded
   scheduler state: scheduled
   exit_status: 0
   signal: 0
   suspended via GUI: no
   active_task_state: EXECUTING
   app version num: 415
   checkpoint CPU time: 0.000000
   current CPU time: 14.716000
   fraction done: 0.000110
   swap size: 364 MB
   working set size: 116 MB
   estimated CPU time remaining: 21514.369500
5) Questions and Answers : Unix/Linux : All tasks in scheduler state uninitialized (Message 94536)
Posted 15 Apr 2020 by Profile SGAI-CSIC
Post:
Thank you for your help, I try to stop boinc daemon a restart again and I see these messages in the log, perhaps it's a bug of the boinc-client on CentOS?


# systemctl stop boinc-client 
# systemctl start boinc-client
# boinccmd --get_messages

1:  15-Apr-2020 14:33:14 (low) [] cc_config.xml not found - using defaults
2: 15-Apr-2020 14:33:14 (low) [] Starting BOINC client version 7.16.1 for x86_64-pc-linux-gnu
3: 15-Apr-2020 14:33:14 (low) [] log flags: file_xfer, sched_ops, task
4: 15-Apr-2020 14:33:14 (low) [] Libraries: libcurl/7.29.0 NSS/3.44 zlib/1.2.7 libidn/1.28 libssh2/1.8.0
5: 15-Apr-2020 14:33:14 (low) [] Data directory: /var/lib/boinc
6: 15-Apr-2020 14:33:14 (low) [] No usable GPUs found
7: 15-Apr-2020 14:33:14 (low) [] [libc detection] gathered: 2.17, GNU libc
8: 15-Apr-2020 14:33:14 (low) [] Host name: rosetta3
9: 15-Apr-2020 14:33:14 (low) [] Processor: 4 GenuineIntel QEMU Virtual CPU version 2.5+ [Family 6 Model 13 Stepping 3]
10: 15-Apr-2020 14:33:14 (low) [] Processor features: fpu de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pse36 clflush mmx fxsr sse sse2 syscall nx lm rep_good nopl xtopology eagerfpu pni cx16 x2apic hypervisor lahf_lm
11: 15-Apr-2020 14:33:14 (low) [] OS: Linux CentOS Linux: CentOS Linux 7 (Core) [3.10.0-1062.18.1.el7.x86_64|libc 2.17 (GNU libc)]
12: 15-Apr-2020 14:33:14 (low) [] Memory: 3.70 GB physical, 1.20 GB virtual
13: 15-Apr-2020 14:33:14 (low) [] Disk: 10.22 GB total, 7.85 GB free
14: 15-Apr-2020 14:33:14 (low) [] Local time is UTC +2 hours
15: 15-Apr-2020 14:33:14 (low) [Rosetta@home] General prefs: from Rosetta@home (last modified 15-Apr-2020 09:58:03)
16: 15-Apr-2020 14:33:14 (low) [Rosetta@home] Computer location: work
17: 15-Apr-2020 14:33:14 (low) [] General prefs: using separate prefs for work
18: 15-Apr-2020 14:33:14 (low) [] Preferences:
19: 15-Apr-2020 14:33:14 (low) [] max memory usage when active: 1894.49 MB
20: 15-Apr-2020 14:33:14 (low) [] max memory usage when idle: 3410.09 MB
21: 15-Apr-2020 14:33:14 (low) [] max disk usage: 7.56 GB
22: 15-Apr-2020 14:33:14 (low) [] (to change preferences, visit a project web site or select Preferences in the Manager)
23: 15-Apr-2020 14:33:14 (low) [] Setting up project and slot directories
24: 15-Apr-2020 14:33:14 (low) [] Checking active tasks
25: 15-Apr-2020 14:33:14 (low) [Rosetta@home] URL http://boinc.bakerlab.org/rosetta/; Computer ID 4062012; resource share 100
26: 15-Apr-2020 14:33:14 (low) [] Setting up GUI RPC socket
27: 15-Apr-2020 14:33:14 (low) [] Checking presence of 23 project files
6) Questions and Answers : Unix/Linux : All tasks in scheduler state uninitialized (Message 94530)
Posted 15 Apr 2020 by Profile SGAI-CSIC
Post:
It's very strange, all my hosts are in the same system and boinc configuration, and now only one it's working on tasks. All the hosts are in the venue "work", and these are my preferences:

Computing preferences:






Rosetta@home preferences



what can be wrong?
7) Questions and Answers : Unix/Linux : All tasks in scheduler state uninitialized (Message 94457)
Posted 14 Apr 2020 by Profile SGAI-CSIC
Post:
It's the same ... Now I have changed the URL in all hosts ... but with the same situation. I don't understand anything ...

I have force the update in one hosts:

52: 14-Apr-2020 18:14:38 (low) [Rosetta@home] update requested by user
53: 14-Apr-2020 18:14:41 (low) [Rosetta@home] Sending scheduler request: Requested by user.
54: 14-Apr-2020 18:14:41 (low) [Rosetta@home] Requesting new tasks for CPU
55: 14-Apr-2020 18:14:42 (low) [Rosetta@home] Scheduler request completed: got 4 new tasks
56: 14-Apr-2020 18:14:44 (low) [Rosetta@home] Started download of local_docking_20_04_15_28_09.xml
57: 14-Apr-2020 18:14:44 (low) [Rosetta@home] Started download of chainA_chainB_20_04_15_28_09.pdb
58: 14-Apr-2020 18:14:47 (low) [Rosetta@home] Finished download of local_docking_20_04_15_28_09.xml
59: 14-Apr-2020 18:14:47 (low) [Rosetta@home] Finished download of chainA_chainB_20_04_15_28_09.pdb
60: 14-Apr-2020 18:14:47 (low) [Rosetta@home] Started download of Mini_Protein_binds_IL1R_COVID-19_design7_SAVE_ALL_OUT_IGNORE_THE_REST_0ys6zi4m.zip
61: 14-Apr-2020 18:14:47 (low) [Rosetta@home] Started download of Mini_Protein_binds_IL1R_COVID-19_design7_SAVE_ALL_OUT_IGNORE_THE_REST_0ys6zi4m.flags
62: 14-Apr-2020 18:14:49 (low) [Rosetta@home] Finished download of Mini_Protein_binds_IL1R_COVID-19_design7_SAVE_ALL_OUT_IGNORE_THE_REST_0ys6zi4m.flags
63: 14-Apr-2020 18:14:49 (low) [Rosetta@home] Started download of Mini_Protein_binds_IL1R_COVID-19_design7_SAVE_ALL_OUT_IGNORE_THE_REST_0uc4pt5i.zip
64: 14-Apr-2020 18:14:53 (low) [Rosetta@home] Finished download of Mini_Protein_binds_IL1R_COVID-19_design7_SAVE_ALL_OUT_IGNORE_THE_REST_0ys6zi4m.zip
65: 14-Apr-2020 18:14:53 (low) [Rosetta@home] Finished download of Mini_Protein_binds_IL1R_COVID-19_design7_SAVE_ALL_OUT_IGNORE_THE_REST_0uc4pt5i.zip
66: 14-Apr-2020 18:14:53 (low) [Rosetta@home] Started download of Mini_Protein_binds_IL1R_COVID-19_design7_SAVE_ALL_OUT_IGNORE_THE_REST_0uc4pt5i.flags
67: 14-Apr-2020 18:14:53 (low) [Rosetta@home] Started download of Mini_Protein_binds_IL1R_COVID-19_design8_SAVE_ALL_OUT_IGNORE_THE_REST_4zr9fy2g.zip
68: 14-Apr-2020 18:14:55 (low) [Rosetta@home] Finished download of Mini_Protein_binds_IL1R_COVID-19_design7_SAVE_ALL_OUT_IGNORE_THE_REST_0uc4pt5i.flags
69: 14-Apr-2020 18:14:55 (low) [Rosetta@home] Started download of Mini_Protein_binds_IL1R_COVID-19_design8_SAVE_ALL_OUT_IGNORE_THE_REST_4zr9fy2g.flags
70: 14-Apr-2020 18:14:56 (low) [Rosetta@home] Finished download of Mini_Protein_binds_IL1R_COVID-19_design8_SAVE_ALL_OUT_IGNORE_THE_REST_4zr9fy2g.flags
71: 14-Apr-2020 18:14:59 (low) [Rosetta@home] Finished download of Mini_Protein_binds_IL1R_COVID-19_design8_SAVE_ALL_OUT_IGNORE_THE_REST_4zr9fy2g.zip


And all the task are again uninitialized:

======= Tasks ========                                                                                                                                                               
1) -----------                                                                                                                                                                        
   name: Mini_Protein_binds_IL1R_COVID-19_design7_SAVE_ALL_OUT_IGNORE_THE_REST_9nn9gy6g_909112_4_0                                                                                    
   WU name: Mini_Protein_binds_IL1R_COVID-19_design7_SAVE_ALL_OUT_IGNORE_THE_REST_9nn9gy6g_909112_4                                                                                   
   project URL: http://boinc.bakerlab.org/rosetta/                                                                                                                                    
   received: Tue Apr 14 11:50:36 2020                                                                                                                                                 
   report deadline: Fri Apr 17 11:50:36 2020                                                                                                                                          
   ready to report: no                                                                                                                                                                
   state: downloaded                                                                                                                                                                  
   scheduler state: uninitialized                                                                                                                                                     
   active_task_state: UNINITIALIZED                                                                                                                                                   
   app version num: 415                                                                                                                                                               
   resources: 1 CPU                                                                                                                                                                   
   estimated CPU time remaining: 15686.105082                                                                                                                                         
2) -----------                                                                                                                                                                        
   name: Mini_Protein_binds_IL1R_COVID-19_design4_SAVE_ALL_OUT_IGNORE_THE_REST_8rz6dh5f_908717_4_0                                                                                    
   WU name: Mini_Protein_binds_IL1R_COVID-19_design4_SAVE_ALL_OUT_IGNORE_THE_REST_8rz6dh5f_908717_4                                                                                   
   project URL: http://boinc.bakerlab.org/rosetta/                                                                                                                                    
   received: Tue Apr 14 11:50:47 2020                                                                                                                                                 
   report deadline: Fri Apr 17 11:50:47 2020                                                                                                                                          
   ready to report: no                                                                                                                                                                
   state: downloaded                                                                                                                                                                  
   scheduler state: uninitialized                                                                                                                                                     
   active_task_state: UNINITIALIZED                                                                                                                                                   
   app version num: 415                                                                                                                                                               
   resources: 1 CPU                                                                                                                                                                   
   estimated CPU time remaining: 15686.105082                                                                                                                                         
3) -----------                                                         
8) Questions and Answers : Unix/Linux : All tasks in scheduler state uninitialized (Message 94430)
Posted 14 Apr 2020 by Profile SGAI-CSIC
Post:
But only in one hosts, in the others continue in uninitialized state :-(
9) Questions and Answers : Unix/Linux : All tasks in scheduler state uninitialized (Message 94428)
Posted 14 Apr 2020 by Profile SGAI-CSIC
Post:
I have detected a change, in one of the host I see running tasks:

======== Tasks ========
1) -----------
name: Mini_Protein_binds_IL1R_COVID-19_design5_SAVE_ALL_OUT_IGNORE_THE_REST_4qo3dr9i_909067_3_0
WU name: Mini_Protein_binds_IL1R_COVID-19_design5_SAVE_ALL_OUT_IGNORE_THE_REST_4qo3dr9i_909067_3
project URL: http://boinc.bakerlab.org/rosetta/
received: Mon Apr 13 15:56:13 2020
report deadline: Thu Apr 16 15:56:12 2020
ready to report: no
state: downloaded
scheduler state: scheduled
active_task_state: EXECUTING
app version num: 415
resources: 1 CPU
estimated CPU time remaining: 33887.100296
CPU time at last checkpoint: 52676.290000
current CPU time: 52753.410000
fraction done: 0.609875
swap size: 898 MB
working set size: 723 MB
2) -----------
name: Mini_Protein_binds_IL1R_COVID-19_design4_SAVE_ALL_OUT_IGNORE_THE_REST_3gp4jq7y_908587_3_0
WU name: Mini_Protein_binds_IL1R_COVID-19_design4_SAVE_ALL_OUT_IGNORE_THE_REST_3gp4jq7y_908587_3
project URL: http://boinc.bakerlab.org/rosetta/
received: Mon Apr 13 15:56:13 2020
report deadline: Thu Apr 16 15:56:12 2020
ready to report: no
state: downloaded
scheduler state: scheduled
active_task_state: EXECUTING
app version num: 415
resources: 1 CPU
estimated CPU time remaining: 46711.422053
CPU time at last checkpoint: 39847.050000
current CPU time: 39937.950000
fraction done: 0.462027
swap size: 845 MB
10) Questions and Answers : Unix/Linux : All tasks in scheduler state uninitialized (Message 94426)
Posted 14 Apr 2020 by Profile SGAI-CSIC
Post:
Hi, thanks for the answer. I have defined the work venue and assigned to all my hosts.




The tasks were running normally during 3 days approximately. The files cc_config and app_config are not present.
11) Questions and Answers : Unix/Linux : All tasks in scheduler state uninitialized (Message 94345)
Posted 13 Apr 2020 by Profile SGAI-CSIC
Post:
Ok the URL it's with http not https, I have detach:

boinccmd --project https://boinc.bakerlab.org/rosetta/ detach

And again attach to http ...

# boinccmd --project_attach "http://boinc.bakerlab.org/rosetta/" "..."

I try to resume:

# boinccmd --project http://boinc.bakerlab.org/rosetta/ resume

But again all tasks it's uninitialized:

1) -----------
name: 5e2680b18d3ff769ed2d8d58de5013ef_start_1900_20_04_19_27_51_globalDocking_2_SAVE_ALL_OUT_913185_24_0
WU name: 5e2680b18d3ff769ed2d8d58de5013ef_start_1900_20_04_19_27_51_globalDocking_2_SAVE_ALL_OUT_913185_24
project URL: http://boinc.bakerlab.org/rosetta/
received: Mon Apr 13 15:56:02 2020
report deadline: Thu Apr 16 15:56:01 2020
ready to report: no
state: downloading
scheduler state: uninitialized
active_task_state: UNINITIALIZED
app version num: 415
resources: 1 CPU
estimated CPU time remaining: 20759.735125
2) -----------
12) Questions and Answers : Unix/Linux : All tasks in scheduler state uninitialized (Message 94344)
Posted 13 Apr 2020 by Profile SGAI-CSIC
Post:
I'm using this URL in order to attach to Rosetta:

boinccmd --project_attach "https://boinc.bakerlab.org/rosetta/"

What's the correct URL?
13) Questions and Answers : Unix/Linux : All tasks in scheduler state uninitialized (Message 94329)
Posted 13 Apr 2020 by Profile SGAI-CSIC
Post:
I have adjusted the "Use at most 50 % of the CPUs" and in one host reset the project:

boinccmd --project "https://boinc.bakerlab.org/rosetta/" reset

but unlucky the tasks continue uninitialized:

boinccmd --get_tasks

======== Tasks ========
1) -----------
name: hgfp_good_frag_52_fold_SAVE_ALL_OUT_909178_181_0
WU name: hgfp_good_frag_52_fold_SAVE_ALL_OUT_909178_181
project URL: https://boinc.bakerlab.org/rosetta/
received: Mon Apr 13 11:28:38 2020
report deadline: Thu Apr 16 11:28:37 2020
ready to report: no
state: downloaded
scheduler state: uninitialized
active_task_state: UNINITIALIZED
app version num: 378
resources: 1 CPU
estimated CPU time remaining: 27485.364576
2) -----------
[...]

The logs doesn't show nothing strange:

# boinccmd --get_messages

13-Apr-2020 11:28:25 (low) [Rosetta@home] Resetting project
31: 13-Apr-2020 11:28:30 (low) [Rosetta@home] Master file download succeeded
32: 13-Apr-2020 11:28:35 (low) [Rosetta@home] Sending scheduler request: To fetch work.
33: 13-Apr-2020 11:28:35 (low) [Rosetta@home] Requesting new tasks for CPU
34: 13-Apr-2020 11:28:38 (low) [Rosetta@home] Scheduler request completed: got 4 new tasks
35: 13-Apr-2020 11:28:38 (user notification) [Rosetta@home] This project is using an old URL. When convenient, remove the project, then add http://boinc.bakerlab.org/rosetta/
36: 13-Apr-2020 11:28:38 (low) [Rosetta@home] General prefs: from Rosetta@home (last modified 13-Apr-2020 11:13:01)
37: 13-Apr-2020 11:28:38 (low) [Rosetta@home] Host location: none
38: 13-Apr-2020 11:28:38 (low) [Rosetta@home] General prefs: using your defaults
39: 13-Apr-2020 11:28:38 (low) [] Preferences:
40: 13-Apr-2020 11:28:38 (low) [] max memory usage when active: 1894.50 MB
41: 13-Apr-2020 11:28:38 (low) [] max memory usage when idle: 3410.10 MB
42: 13-Apr-2020 11:28:38 (low) [] max disk usage: 7.56 GB
43: 13-Apr-2020 11:28:38 (low) [] Number of usable CPUs has changed from 4 to 2.
44: 13-Apr-2020 11:28:38 (low) [] max CPUs used: 2
45: 13-Apr-2020 11:28:38 (low) [] don't use GPU while active
46: 13-Apr-2020 11:28:38 (low) [] suspend work if non-BOINC CPU load exceeds 75%
47: 13-Apr-2020 11:28:38 (low) [] (to change preferences, visit a project web site or select Preferences in the Manager)
48: 13-Apr-2020 11:28:40 (low) [Rosetta@home] Started download of rosetta_4.15_x86_64-pc-linux-gnu
49: 13-Apr-2020 11:28:40 (low) [Rosetta@home] Started download of rosetta_graphics_4.15_x86_64-pc-linux-gnu
50: 13-Apr-2020 11:30:44 (low) [Rosetta@home] Finished download of rosetta_graphics_4.15_x86_64-pc-linux-gnu
51: 13-Apr-2020 11:30:44 (low) [Rosetta@home] Started download of database_357d5d93529_n_methyl.zip
52: 13-Apr-2020 11:31:01 (low) [Rosetta@home] Finished download of rosetta_4.15_x86_64-pc-linux-gnu
14) Questions and Answers : Unix/Linux : All tasks in scheduler state uninitialized (Message 94244)
Posted 12 Apr 2020 by Profile SGAI-CSIC
Post:
Past days the tasks are running normally and It doesn't run other BOINC projects. I have 5 (clone) system with CentOS and in all the task are in uninitialized state.

ID:4061992
ID: 4062010
ID: 4061905
ID: 4062012
ID: 4061963

I have not limit when BOINC can run. The log boincmd --get-messages it's seems normal:

294: 12-Apr-2020 12:48:47 (user notification) [Rosetta@home] This project is using an old URL. When convenient, remove the project, then add http://boinc.bakerlab.org/rosetta/
295: 12-Apr-2020 12:48:47 (low) [Rosetta@home] General prefs: from Rosetta@home (last modified 12-Apr-2020 11:51:30)
296: 12-Apr-2020 12:48:47 (low) [Rosetta@home] Host location: none
297: 12-Apr-2020 12:48:47 (low) [Rosetta@home] General prefs: using your defaults
298: 12-Apr-2020 12:48:47 (low) [] Preferences:
299: 12-Apr-2020 12:48:47 (low) [] max memory usage when active: 1894.50 MB
300: 12-Apr-2020 12:48:47 (low) [] max memory usage when idle: 3410.10 MB
301: 12-Apr-2020 12:48:47 (low) [] max disk usage: 7.56 GB
302: 12-Apr-2020 12:48:47 (low) [] don't use GPU while active
303: 12-Apr-2020 12:48:47 (low) [] suspend work if non-BOINC CPU load exceeds 75%
304: 12-Apr-2020 12:48:47 (low) [] (to change preferences, visit a project web site or select Preferences in the Manager)
305: 12-Apr-2020 12:48:49 (low) [Rosetta@home] Started download of hgfp_het2_215_data.zip
306: 12-Apr-2020 12:48:49 (low) [Rosetta@home] Started download of hgfp_good_frag_184_data.zip
307: 12-Apr-2020 12:49:00 (low) [Rosetta@home] Finished download of hgfp_het2_215_data.zip
308: 12-Apr-2020 12:49:03 (low) [Rosetta@home] Finished download of hgfp_good_frag_184_data.zip

I have adjust in Rosetta@home preferences Target CPU run time 1 day, It's ok?
15) Questions and Answers : Unix/Linux : All tasks in scheduler state uninitialized (Message 94223)
Posted 12 Apr 2020 by Profile SGAI-CSIC
Post:
Hi, I have observed that all tasks are in scheduler state: uninitialized. It's normal? What does it mean?

1) -----------
name: hgfp_dimer_5x_254_fold_SAVE_ALL_OUT_906972_605_0
WU name: hgfp_dimer_5x_254_fold_SAVE_ALL_OUT_906972_605
project URL: https://boinc.bakerlab.org/rosetta/
received: Fri Apr 10 17:07:41 2020
report deadline: Mon Apr 13 17:07:41 2020
ready to report: no
state: downloaded
scheduler state: uninitialized
active_task_state: UNINITIALIZED
app version num: 378
resources: 1 CPU
estimated CPU time remaining: 22168.405735
2) -----------
name: 7v1nm_gg_c274_7mer_gb_00510_SAVE_ALL_OUT_907410_372_0
WU name: 7v1nm_gg_c274_7mer_gb_00510_SAVE_ALL_OUT_907410_372
project URL: https://boinc.bakerlab.org/rosetta/
received: Fri Apr 10 17:07:41 2020
report deadline: Mon Apr 13 17:07:41 2020
ready to report: no
state: downloaded
scheduler state: uninitialized
active_task_state: UNINITIALIZED
app version num: 412
resources: 1 CPU
estimated CPU time remaining: 81737.392995
3) -----------
name: hgfp_dimer_3x_317_fold_SAVE_ALL_OUT_906914_611_0
WU name: hgfp_dimer_3x_317_fold_SAVE_ALL_OUT_906914_611
project URL: https://boinc.bakerlab.org/rosetta/
received: Fri Apr 10 17:23:20 2020
report deadline: Mon Apr 13 17:23:20 2020
ready to report: no
state: downloaded
scheduler state: uninitialized
active_task_state: UNINITIALIZED
app version num: 378
resources: 1 CPU
16) Questions and Answers : Unix/Linux : Multiple tasks in multicore vm (Message 93666)
Posted 6 Apr 2020 by Profile SGAI-CSIC
Post:
Hi, I have found the problem, it's the lack of space on disk (I have noted that I have very little disk only for the system). Now I have increase the disk space and I have more tasks running.
17) Questions and Answers : Unix/Linux : Multiple tasks in multicore vm (Message 93638)
Posted 6 Apr 2020 by Profile SGAI-CSIC
Post:
In principle 90%:

<ram_max_used_idle_pct>90.000000</ram_max_used_idle_pct>
18) Questions and Answers : Unix/Linux : Multiple tasks in multicore vm (Message 93624)
Posted 6 Apr 2020 by Profile SGAI-CSIC
Post:
I have increased memory of vm to 8GB, so if COVID tasks are tagged as requiring 2GB of memory per active thread, in theory It can run two or three more tasks, but not, it continue to run only one task.
19) Questions and Answers : Unix/Linux : Multiple tasks in multicore vm (Message 93491)
Posted 5 Apr 2020 by Profile SGAI-CSIC
Post:
Hi, I have installed boinccmd in a Centos 7 VM (kvm). The vm has 8 vcpu and 4 GB of memory. I have noted that boinc only run one task in one vcpu:

1) -----------
name: 1fm5fz4k_jhr_design1_COVID-19_SAVE_ALL_OUT_903459_1_1
WU name: 1fm5fz4k_jhr_design1_COVID-19_SAVE_ALL_OUT_903459_1
project URL: https://boinc.bakerlab.org/rosetta/
received: Sun Apr 5 00:56:22 2020
report deadline: Mon Apr 13 00:56:21 2020
ready to report: no
state: downloaded
scheduler state: scheduled
active_task_state: EXECUTING
app version num: 412
resources: 1 CPU
estimated CPU time remaining: 21517.972794



With the other 7 vcpu idle. How to force to boinc to download more task to run in the other vpcu?






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