Posts by Terrible T

1) Message boards : Number crunching : Tells us your thoughts on granting credit for large protein, long-running tasks (Message 95557)
Posted 29 Apr 2020 by Terrible T
Post:
too late ;

tks Kuuke
2) Message boards : Number crunching : Work done - no "pay" for it (Message 95205)
Posted 23 Apr 2020 by Terrible T
Post:
After loosing a good 200.000 sec of wasted computer power over cancelled and error tasks (also cancellled) it indeed would be better to have some more testing prior releasing of work units.
3) Message boards : Number crunching : Minirosetta 3.73-3.78 (Message 94353)
Posted 13 Apr 2020 by Terrible T
Post:
Just had a bunch of mini rosetta fail:

<core_client_version>7.14.2</core_client_version>
<![CDATA[
<message>
app_version download error: couldn't get input files:
<file_xfer_error>
<file_name>database_357d5d93529_n_methyl.zip</file_name>
<error_code>-120 (RSA key check failed for file)</error_code>
<error_message>signature verification failed</error_message>
</file_xfer_error>
</message>
]]>

However also increased nr of cores in use, not certain if it was a bad batch or if using 10 out of 12 cores was too much (I 6800K @3.5 GHz 32Gb.
Anybody had same issue??


Tried too go back to 6 cores, now waiting on Windows update.........
4) Message boards : Number crunching : Rosetta 4.0+ (Message 90629)
Posted 7 Apr 2019 by Terrible T
Post:
Apparently these big proteins need still more memory?

Had now several of this serie failing after 20000secs of computing.
FYI:

WU 960589108

<core_client_version>7.14.2</core_client_version>
<![CDATA[
<message>
(unknown error) - exit code -529697949 (0xe06d7363)</message>
<stderr_txt>
command: projects/boinc.bakerlab.org_rosetta/rosetta_4.07_windows_intelx86.exe @rb_04_03_2468_2618_ab_t000__robetta_FLAGS -in::file::fasta t000_.fasta -psipred_ss2 t000_.spider3_ss2 -kill_hairpins t000_.nobuformat.spider3_ss2 -abinitio::use_filters true -constraints::cst_file t000_.fasta.CB.cst -constraints:cst_weight 5.0 -constraints::cst_fa_file t000_.fasta.MIN.cst -constraints:cst_fa_weight 5.0 -in:file:boinc_wu_zip rb_04_03_2468_2618_ab_t000__robetta.zip -frag3 rb_04_03_2468_2618_ab_t000__robetta.200.3mers.index.gz -fragA rb_04_03_2468_2618_ab_t000__robetta.200.17mers.index.gz -fragB rb_04_03_2468_2618_ab_t000__robetta.200.9mers.index.gz -nstruct 10000 -cpu_run_time 28800 -watchdog -boinc:max_nstruct 600 -checkpoint_interval 120 -mute all -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2189964
Starting watchdog...
Watchdog active.


Unhandled Exception Detected...

- Unhandled Exception Record -
Reason: Out Of Memory (C++ Exception) (0xe06d7363) at address 0x74C345A2

Engaging BOINC Windows Runtime Debugger...






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