Posts by Tomcat雄猫

1) Message boards : Number crunching : How to prevent tasks from getting stuck in the stash (Message 99670)
Posted 13 Nov 2020 by Tomcat雄猫
Post:
That is not what I'm witnessing, for some reason. In my case, Rosetta@home has a resource share of 200 instead of the default. I have a couple of Rosetta@home tasks (those were the only tasks in my cache, mind you) with a deadline 3 days away waiting to be started. Instead of running these tasks after completing a couple of other ones, BOINC downloaded new tasks that had a deadline a week away and ran those instead.

Rosetta@home has a higher resource share, so those tasks should be prioritized.
The Rosetta@home tasks came first, so they should've been run first.
The Rosetta@home tasks had a shorter deadline and had a longer estimated runtime, which should also cause them to be prioritized.
My cache size is set to 0.1 days + 0 days, which should mean there shouldn't be many tasks being cached.

Despite all that, BOINC decided to continually download new tasks from a different project and ignore the Rosetta tasks in my cache.
2) Message boards : Number crunching : How to prevent tasks from getting stuck in the stash (Message 99662)
Posted 13 Nov 2020 by Tomcat雄猫
Post:
I've noticed that my BOINC installation, for some reason, seems to prioritize downloading new tasks and running those instead of finishing the tasks in the stash. This happens even when the newly downloaded tasks are further away from the deadline and take a lot less time to complete. This may result in the old tasks not being run or started until it's too late. I've set my BOINC manager to store at least 0.1 days of tasks and store up to an additional 0 days of work.

Is this normal? And if it is, is there are a way to force BOINC to prioritise tasks that have either been in storage for some time or are closer to their deadlines without user supervision?
3) Message boards : Number crunching : Problems and Technical Issues with Rosetta@home (Message 99599)
Posted 7 Nov 2020 by Tomcat雄猫
Post:
This can happen when there are network issues

Welcome to my daily life. That and power issues.
That explains it, I'll just not bother. It's only two tasks.
Thanks.
4) Message boards : Number crunching : Problems and Technical Issues with Rosetta@home (Message 99596)
Posted 7 Nov 2020 by Tomcat雄猫
Post:
Phantom tasks?
These two tasks are supposedly "In progress", but I cannot find them in Boinc Manager. Updating the project does nothing.
drhicks1_derroids_torricks_fd2_SAVE_ALL_OUT_IGNORE_THE_REST_4za6sf5o_1021338_3_0
rb_11_04_43158_42385__t000__1_C1_SAVE_ALL_OUT_IGNORE_THE_REST_1021346_50_0
These aren't even in the BOINC project folder.
5) Message boards : Number crunching : Rosetta 4.1+ and 4.2+ (Message 98932)
Posted 9 Sep 2020 by Tomcat雄猫
Post:
Weirdness going on with epcam_breaker_graft tasks and pdl1_graft tasks. Ryzen 5 3600.
epcam_breaker_graft_v1_SAVE_ALL_OUT_IGNORE_THE_REST_5qk5oi3n_1009505_1_0
epcam_breaker_graft_v1_SAVE_ALL_OUT_IGNORE_THE_REST_6bm5er4p_1009415_1_0
<core_client_version>7.16.7</core_client_version>
<![CDATA[
<stderr_txt>
aftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
 ------------------------ Begin developer's backtrace ------------------------- 
BACKTRACE:
 ------------------------- End developer's backtrace -------------------------- 


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
 ------------------------ Begin developer's backtrace ------------------------- 
BACKTRACE:
 ------------------------- End developer's backtrace -------------------------- 


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.

Over and over...

pdl1_graft_v1_SAVE_ALL_OUT_IGNORE_THE_REST_0qr5ng7d_1009519_1_0
pdl1_graft_v1_SAVE_ALL_OUT_IGNORE_THE_REST_3lp5qn2q_1009342_1_0
Same issue, just:
<core_client_version>7.16.7</core_client_version>
<![CDATA[
<stderr_txt>
ftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
 ------------------------ Begin developer's backtrace ------------------------- 
BACKTRACE:
 ------------------------- End developer's backtrace -------------------------- 


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
 ------------------------ Begin developer's backtrace ------------------------- 
BACKTRACE:
 ------------------------- End developer's backtrace -------------------------- 


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.

Over and over.
Everything else runs absolutely fine.

I don't know the location of the "ROSETTA_CRASH.log" mentioned.
6) Message boards : Number crunching : Rosetta 4.1+ and 4.2+ (Message 98721)
Posted 29 Aug 2020 by Tomcat雄猫
Post:
Update, the sortilin tasks still have issues.
sortilin_site1_graft_design_v1_12_SAVE_ALL_OUT_IGNORE_THE_REST_9na6ea4v_1007526_2_0
sortilin_site2_graft_design_v1_4_SAVE_ALL_OUT_IGNORE_THE_REST_9sn5rb8s_1007532_2_0

[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
 ------------------------ Begin developer's backtrace ------------------------- 
BACKTRACE:
 ------------------------- End developer's backtrace -------------------------- 


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.


And so on and so forth.
7) Message boards : Number crunching : Rosetta 4.1+ and 4.2+ (Message 98720)
Posted 29 Aug 2020 by Tomcat雄猫
Post:
Update, the sortilin tasks still have issues.
sortilin_site1_graft_design_v1_12_SAVE_ALL_OUT_IGNORE_THE_REST_9na6ea4v_1007526_2_0
sortilin_site2_graft_design_v1_4_SAVE_ALL_OUT_IGNORE_THE_REST_9sn5rb8s_1007532_2_0

[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
 ------------------------ Begin developer's backtrace ------------------------- 
BACKTRACE:
 ------------------------- End developer's backtrace -------------------------- 


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DE
TAILS.

And so on and so forth.
8) Message boards : Number crunching : Rosetta 4.1+ and 4.2+ (Message 98714)
Posted 28 Aug 2020 by Tomcat雄猫
Post:
This one in interesting.
sortilin_site2_graft_design_v1_9_SAVE_ALL_OUT_IGNORE_THE_REST_9qb8kr2z_1007558_2_0
Just checked my Valids i got the same thing for all of those Work Units- Ran for the Target CPU time, Valid, but heaps of recurring errors in the Stderr output.

Looks like not a single Decoy has been produced by any of those Work Units.

I tried restarting one of those after it got stuck 3 times. Like you, nothing but errors in the stderr file. Gave up on it and aborted it. Of course it was replaced by a dna_binder task that immediately errored out. Running around 60% chance of any Rosetta task completely successfully on my host it seems.


Just got another sortilin_site2_graft_design_v1 tasks, I'll run them to completion (which is 36 hours for me) and see if the same thing happens again.
I also got a pair of dna_binder_round2_SAVE_ALL_OUT_IGNORE_THE_REST tasks that seem to be running fine.
Lots of wonky tasks this week.
9) Message boards : Number crunching : Rosetta 4.1+ and 4.2+ (Message 98700)
Posted 27 Aug 2020 by Tomcat雄猫
Post:
This one in interesting.
sortilin_site2_graft_design_v1_9_SAVE_ALL_OUT_IGNORE_THE_REST_9qb8kr2z_1007558_2_0
[code]<core_client_version>7.16.7</core_client_version>
<![CDATA[
<stderr_txt>
aftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



[ ERROR ]: Caught exception:


File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537
For this scaffold there are not suitable scaffold grafts within your constrains
------------------------ Begin developer's backtrace -------------------------
BACKTRACE:
------------------------- End developer's backtrace --------------------------


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log F
10) Message boards : Number crunching : Rosetta 4.1+ and 4.2+ (Message 98699)
Posted 27 Aug 2020 by Tomcat雄猫
Post:
Same over here.
dna_binder_round2_SAVE_ALL_OUT_IGNORE_THE_REST_7sl2le1r_1008033_1_1
<core_client_version>7.16.7</core_client_version>
<![CDATA[
<stderr_txt>
command: projects/boinc.bakerlab.org_rosetta/rosetta_4.20_windows_x86_64.exe -run:protocol jd2_scripting -parser:protocol single_helix_boinc_v1.xml @flags_TFSCAFFOLD -in:file:silent dna_binder_round2_SAVE_ALL_OUT_IGNORE_THE_REST_7sl2le1r.silent -in:file:silent_struct_type binary -silent_gz -mute all -silent_read_through_errors true -out:file:silent_struct_type binary -out:file:silent default.out -in:file:boinc_wu_zip dna_binder_round2_SAVE_ALL_OUT_IGNORE_THE_REST_7sl2le1r.zip @dna_binder_round2_SAVE_ALL_OUT_IGNORE_THE_REST_7sl2le1r.flags -nstruct 10000 -cpu_run_time 28800 -boinc:max_nstruct 20000 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -boinc::cpu_run_timeout 36000 -run::rng mt19937 -constant_seed -jran 2359514
Using database: database_357d5d93529_n_methylminirosetta_database
======================================================
DONE ::     1 starting structures     1201 cpu seconds
This process generated      1 decoys from       1 attempts
======================================================
BOINC :: WS_max 0
08:13:10 (7360): called boinc_finish(0)

</stderr_txt>
<message>
upload failure: <file_xfer_error>
  <file_name>dna_binder_round2_SAVE_ALL_OUT_IGNORE_THE_REST_7sl2le1r_1008033_1_1_r568820554_0</file_name>
  <error_code>-240 (stat() failed)</error_code>
</file_xfer_error>
</message>
]]>
11) Message boards : Number crunching : Rosetta 4.1+ and 4.2+ (Message 98628)
Posted 23 Aug 2020 by Tomcat雄猫
Post:
Suffered a second-long power outage (I probably should get a UPS due to how frequent these have become) and got this.
rb_08_19_34924_34163_ab_t000__h002_robetta_IGNORE_THE_REST_06_15_1007200_6_1
<core_client_version>7.16.7</core_client_version>
<![CDATA[
<stderr_txt>
command: projects/boinc.bakerlab.org_rosetta/rosetta_4.20_windows_x86_64.exe @rb_08_19_34924_34163_ab_t000__h002_robetta_FLAGS -in::file::fasta t000__h002.fasta -in:file:boinc_wu_zip rb_08_19_34924_34163_ab_t000__h002_robetta.zip -frag3 rb_08_19_34924_34163_ab_t000__h002_robetta.200.3mers.index.gz -fragA rb_08_19_34924_34163_ab_t000__h002_robetta.200.15mers.index.gz -fragB rb_08_19_34924_34163_ab_t000__h002_robetta.200.6mers.index.gz -nstruct 10000 -cpu_run_time 28800 -boinc:max_nstruct 20000 -checkpoint_interval 120 -mute all -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -boinc::cpu_run_timeout 36000 -run::rng mt19937 -constant_seed -jran 1829116
Using database: database_357d5d93529_n_methylminirosetta_database

ERROR: Fullatom mismatch in checkpointer.
ERROR:: Exit from: ......srcprotocolscheckpointCheckPointer.cc line: 380
06:54:58 (11364): called boinc_finish(0)

</stderr_txt>
]]>

It validated as valid instead of error? Is that normal? I also got the same amount of credits for this task as my wing-man despite having half their run-time, somehow.
Now we are back on topic, I hope. Let's not steer the topic towards UPSes.
12) Message boards : Number crunching : Problems and Technical Issues with Rosetta@home (Message 98238)
Posted 20 Jul 2020 by Tomcat雄猫
Post:
Where did you get the data from?
I was just looking at the Measured floating point speed and Measured integer speed values on each Computer Details page, which come from the Whetstone and Dhrystone benchmarks that BOINC runs.


Those numbers are anything but accurate.
My hilariously thermally constrained Macbook from 2015 has a measured floating point speed of 5.65GFLOPs (it can go above 6.10GFLOPs sometimes, which is way higher than a well-cooled i9-9900K). That is faster than my Ryzen 3600 and many current gen high-end desktop-grade CPUs from Intel.
There is no way that can be true, integer performance seems to match up to expectations, though.
13) Message boards : Number crunching : Rosetta 4.1+ and 4.2+ (Message 98003)
Posted 11 Jul 2020 by Tomcat雄猫
Post:
Another TFSCAFFOLD0001 errored out on my end, that was expected.
One task ended prematurely due to a power outage for me, although it validated fine and wasn't marked as a computational error.
11527f43_fold_SAVE_ALL_OUT_951790_903_0
<core_client_version>7.16.7</core_client_version>
<![CDATA[
<stderr_txt>
command: projects/boinc.bakerlab.org_rosetta/rosetta_4.20_windows_x86_64.exe -abinitio::fastrelax 1 -ex2aro 1 -frag3 00001.200.3mers.index -in:file:native 00001.pdb -silent_gz 1 -frag9 00001.200.9mers.index -out:file:silent default.out -ex1 1 -abinitio::rsd_wt_loop 0.5 -relax::default_repeats 5 -abinitio::use_filters false -abinitio::increase_cycles 10 -abinitio::rsd_wt_helix 0.5 -beta 1 -abinitio::rg_reweight 0.5 -in:file:boinc_wu_zip 11527f43_data.zip -out:file:silent default.out -silent_gz -mute all -nstruct 10000 -cpu_run_time 28800 -boinc:max_nstruct 20000 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -boinc::cpu_run_timeout 36000 -run::rng mt19937 -constant_seed -jran 3121464
Using database: database_357d5d93529_n_methylminirosetta_database

ERROR: Fullatom mismatch in checkpointer.
ERROR:: Exit from: ......srcprotocolscheckpointCheckPointer.cc line: 380
01:10:25 (15132): called boinc_finish(0)

</stderr_txt>
]]>

Methinks something went wrong with the check-pointing system?
14) Message boards : Number crunching : Rosetta 4.1+ and 4.2+ (Message 97988)
Posted 9 Jul 2020 by Tomcat雄猫
Post:
8 TFSCAFFOLD0001 tasks here on my Ryzen Win10 machine, all upload failures with very short runtimes.

Example:
TFSCAFFOLD0001_1_SAVE_ALL_OUT_IGNORE_THE_REST_3yo4ci7f_953352_14_1
<core_client_version>7.16.7</core_client_version>
<![CDATA[
<stderr_txt>
command: projects/boinc.bakerlab.org_rosetta/rosetta_4.20_windows_x86_64.exe -run:protocol jd2_scripting -parser:protocol marA_boinc_v1.xml @flags_TFSCAFFOLD -in:file:silent TFSCAFFOLD0001_1_SAVE_ALL_OUT_IGNORE_THE_REST_3yo4ci7f.silent -in:file:silent_struct_type binary -silent_gz -mute all -silent_read_through_errors true -out:file:silent_struct_type binary -out:file:silent default.out -in:file:boinc_wu_zip TFSCAFFOLD0001_1_SAVE_ALL_OUT_IGNORE_THE_REST_3yo4ci7f.zip @TFSCAFFOLD0001_1_SAVE_ALL_OUT_IGNORE_THE_REST_3yo4ci7f.flags -nstruct 10000 -cpu_run_time 28800 -boinc:max_nstruct 20000 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -boinc::cpu_run_timeout 36000 -run::rng mt19937 -constant_seed -jran 2479129
Using database: database_357d5d93529_n_methylminirosetta_database
======================================================
DONE ::     1 starting structures     1201 cpu seconds
This process generated      1 decoys from       1 attempts
======================================================
BOINC :: WS_max 0
10:58:15 (5968): called boinc_finish(0)

</stderr_txt>
<message>
upload failure: <file_xfer_error>
  <file_name>TFSCAFFOLD0001_1_SAVE_ALL_OUT_IGNORE_THE_REST_3yo4ci7f_953352_14_1_r428283726_0</file_name>
  <error_code>-240 (stat() failed)</error_code>
</file_xfer_error>
</message>
]]>
15) Message boards : Number crunching : no new tasks? (Message 97677)
Posted 27 Jun 2020 by Tomcat雄猫
Post:
alas - WUs return. We'll have to wait and see how long it lasts.


Well, at least this isn't Climateprediction.net. WUs come and go, but it's usually pretty stable from my experience.
16) Message boards : Number crunching : Rosetta 4.1+ and 4.2+ (Message 97371)
Posted 14 Jun 2020 by Tomcat雄猫
Post:
I wonder what this is? Ran for about half an hour before erroring out.
rb_06_13_29145_28622_ab_t000__robetta_cstwt_5.0_FT_IGNORE_THE_REST_06_05_947971_63_1
<core_client_version>7.16.7</core_client_version>
<![CDATA[
<message>
Incorrect function.
 (0x1) - exit code 1 (0x1)</message>
<stderr_txt>
command: projects/boinc.bakerlab.org_rosetta/rosetta_4.20_windows_x86_64.exe @rb_06_13_29145_28622_ab_t000__robetta_FLAGS -in::file::fasta t000_.fasta -jumps:pairing_file t000_.fasta.bbcontacts.jumps -jumps:random_sheets 9 1 -constraints::cst_file t000_.fasta.CB.cst -constraints:cst_weight 5.0 -constraints::cst_fa_file t000_.fasta.MIN.cst -constraints:cst_fa_weight 5.0 -in:file:boinc_wu_zip rb_06_13_29145_28622_ab_t000__robetta.zip -frag3 rb_06_13_29145_28622_ab_t000__robetta.200.3mers.index.gz -fragA rb_06_13_29145_28622_ab_t000__robetta.200.5mers.index.gz -fragB rb_06_13_29145_28622_ab_t000__robetta.200.6mers.index.gz -nstruct 10000 -cpu_run_time 28800 -boinc:max_nstruct 20000 -checkpoint_interval 120 -mute all -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -boinc::cpu_run_timeout 36000 -run::rng mt19937 -constant_seed -jran 2496535
Using database: database_357d5d93529_n_methylminirosetta_database

[ ERROR ]: Caught exception:


File: C:cygwin64homeboinc4.17Rosettamainsourcesrccore/pack/dunbrack/SingleResidueDunbrackLibrary.hh:306
chi angle must be between -180 and 180: -nan(ind)
 ------------------------ Begin developer's backtrace ------------------------- 
BACKTRACE:
 ------------------------- End developer's backtrace -------------------------- 


AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.



</stderr_txt>
]]>
17) Message boards : Number crunching : Rosetta 4.1+ and 4.2+ (Message 97279)
Posted 8 Jun 2020 by Tomcat雄猫
Post:
Got this error
[url]Junior_HalfRoid_design6_cart_COVID-19_SAVE_ALL_OUT_IGNORE_THE_REST_4pd4vc0f_929576_40_0 url=https://boinc.bakerlab.org/rosetta/result.php?resultid=1199104948[/url]
<core_client_version>7.16.7</core_client_version>
<![CDATA[
<message>
Incorrect function.
 (0x1) - exit code 1 (0x1)</message>
<stderr_txt>
command: projects/boinc.bakerlab.org_rosetta/rosetta_4.20_windows_x86_64.exe -run:protocol jd2_scripting -parser:protocol jhr_boinc_v4_cart.xml @flags -in:file:silent Junior_HalfRoid_design6_cart_COVID-19_SAVE_ALL_OUT_IGNORE_THE_REST_4pd4vc0f.silent -in:file:silent_struct_type binary -silent_gz -mute all -silent_read_through_errors true -out:file:silent_struct_type binary -out:file:silent default.out -in:file:boinc_wu_zip Junior_HalfRoid_design6_cart_COVID-19_SAVE_ALL_OUT_IGNORE_THE_REST_4pd4vc0f.zip @Junior_HalfRoid_design6_cart_COVID-19_SAVE_ALL_OUT_IGNORE_THE_REST_4pd4vc0f.flags -nstruct 10000 -cpu_run_time 28800 -boinc:max_nstruct 20000 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -boinc::cpu_run_timeout 36000 -run::rng mt19937 -constant_seed -jran 1052475
Using database: database_357d5d93529_n_methylminirosetta_database

ERROR: [ERROR] Unable to open constraints file: 731194738833825cfcfe8f26a04b26f3_n1_c0_1_0001.MSAcst
ERROR:: Exit from: ......srccorescoringconstraintsConstraintIO.cc line: 457
BOINC:: Error reading and gzipping output datafile: default.out
18:29:4
4 (18508): called boinc_finish(1)

</stderr_txt>
]]>[/quote][/code]
18) Message boards : Number crunching : Peer certificate cannot be authenticated with given CA certificates (Message 96984)
Posted 31 May 2020 by Tomcat雄猫
Post:
Presumably this will rectify after midnight in each user's timezone? In Android 9 (Pie) the following DID NOT WORK:

1) Settings >> General >> Lock screen & security >> Advanced / Encryption & credentials >> Trusted credentials
2) Select AddTrust AB (AddTrust External CA Root)
3) Note that this cert expires 30 May 2020
4) Press DISABLE
5) Restart device
6) Restart BOINC

At least for me this does not rectify the uploads hanging. There is a RESET option when selecting the Rosetta@home project in the Android app, but I'm reluctant to select this as I could lose the work I'm attempting to upload. Setting the time/date to tomorrow (E.g. selecting timezone for Sydney) also did not resolve.


I'm on Android 8.0 and it didn't work for me. In the end, I was forced to abort all tasks and let some others timeout. This is not good. Fortunately, I have a really small cache.
I even tried disabling all the AddTrust AB certificates. No dice. I can't even re-add Rosetta after removing it (that probably means RESET won't work). I think one needs to remove those expired credentials outright to fix this (I don't think you can remove single credentials from Android).

Welp, I guess that's two Android devices down for me. One because of issues with BOINC and Android 9.0, plus the fact that I don't charge that device enough to meet the deadlines. One because of this certificate expiring.

I hope this gets resolved before we get a massive wave of tasks timing out.


It only affects some projects, my Androids are doing other project work instead. I only know of LHC, Rosetta, and Numberfields needing the certificate.


I'm running WCG on my two phones now. I am concerned about the impact on this project though.
19) Message boards : Number crunching : Peer certificate cannot be authenticated with given CA certificates (Message 96955)
Posted 31 May 2020 by Tomcat雄猫
Post:
run command prompt as administrator

Easier said than done: you have to go Windows key+R then Ctrl+Shift+Enter together

cd "/Program Files/BOINC" (using backslashes, which I can't seem to make display OK)
copy ca-bundle.crt ca-bundle.crt.bak

This didn't work as I get access denied.

WTF - why isn't the Rosetta admin fixing this snafu?


I think this is an issue with BOINC, not Rosetta. LHC@home is also affected, as well as NumberFields@Home.
My Mac is doing fine so far, which is rather interesting.
20) Message boards : Number crunching : Peer certificate cannot be authenticated with given CA certificates (Message 96952)
Posted 31 May 2020 by Tomcat雄猫
Post:
Presumably this will rectify after midnight in each user's timezone? In Android 9 (Pie) the following DID NOT WORK:

1) Settings >> General >> Lock screen & security >> Advanced / Encryption & credentials >> Trusted credentials
2) Select AddTrust AB (AddTrust External CA Root)
3) Note that this cert expires 30 May 2020
4) Press DISABLE
5) Restart device
6) Restart BOINC

At least for me this does not rectify the uploads hanging. There is a RESET option when selecting the Rosetta@home project in the Android app, but I'm reluctant to select this as I could lose the work I'm attempting to upload. Setting the time/date to tomorrow (E.g. selecting timezone for Sydney) also did not resolve.


I'm on Android 8.0 and it didn't work for me. In the end, I was forced to abort all tasks and let some others timeout. This is not good. Fortunately, I have a really small cache.
I even tried disabling all the AddTrust AB certificates. No dice. I can't even re-add Rosetta after removing it (that probably means RESET won't work). I think one needs to remove those expired credentials outright to fix this (I don't think you can remove single credentials from Android).

Welp, I guess that's two Android devices down for me. One because of issues with BOINC and Android 9.0, plus the fact that I don't charge that device enough to meet the deadlines. One because of this certificate expiring.

I hope this gets resolved before we get a massive wave of tasks timing out.


Next 20



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