Problems and Technical Issues with Rosetta@home

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KaguraMea

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Message 112049 - Posted: 6 Feb 2025, 14:52:15 UTC
Last modified: 6 Feb 2025, 14:59:32 UTC

Having multiple Computation Error a few seconds into running Rosetta Beta application (6 in 33 tasks just downloaded). BOINC log indicates "Output file xxx for task yyy absent". System kernel log showed no filesystem error and likes.
Probably these tasks are just buggy?
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Dr Who Fan
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Message 112053 - Posted: 6 Feb 2025, 22:41:23 UTC - in response to Message 112049.  

Since you're computer are hidden, I'm going to say it's more than likely the buggy Rosetta tasks that have been discussed in the forum below.
Nothing you can do
Problems and Technical Issues with Rosetta@home.
Go to the last few most recent posting (about 1 week back until the current day) )in the topic.

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Jean-David Beyer

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Message 112054 - Posted: 7 Feb 2025, 0:08:54 UTC - in response to Message 112049.  

Most of mine seem to work on my Linux machine. Those that error out look like this:

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<message>
process exited with code 1 (0x1, -255)</message>
<stderr_txt>
command: ../../projects/boinc.bakerlab.org_rosetta/rosetta_beta_6.06_x86_64-pc-linux-gnu @10aa_1_a_hal_10aa_ce9818_d66_0001.flags -nstruct 10000 -cpu_run_time 28800 -boinc:max_nstruct 20000 -checkpoint_interval 120 -mute all -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -boinc::cpu_run_timeout 36000 -run::rng mt19937
Using database: database_f5ae1de8e1/database

ERROR: Error in simple_cycpep_predict app!  The imported native pose has a different number of residues than the sequence provided.
ERROR:: Exit from: src/protocols/cyclic_peptide_predict/SimpleCycpepPredictApplication.cc line: 2798
BOINC:: Error reading and gzipping output datafile: default.out
10:16:38 (199863): called boinc_finish(1)

</stderr_txt>
]]>

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Bill Swisher

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Message 112055 - Posted: 7 Feb 2025, 4:38:16 UTC

They seem to be getting quicker on fixing things! Only went away for about a day and a half this week.

<sarcasm> Let's give them a "Well done"? </sarcasm>

But they really need to look into the cron job(s) running on late Tuesday or early Wednesday.
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Sid Celery

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Message 112056 - Posted: 7 Feb 2025, 12:22:05 UTC - in response to Message 112041.  

What day is it today? Third consecutive Wednesday.
Seems something scheduled...

Aaaaandddd, fourth!!

If someone wants lottery numbers, send me a PM :-P

I looked earlier and everything was fine and I thought of saying something here, until I realised it was early in the day and there was still time
I make enough of a fool of myself by accident - no need to do so on purpose as well

It's like clockwork.
boinc-process server falls over on a Wednesday
Revives on a Friday

It's almost biblical. When is Easter this year? The Gods of Rosetta have their Easter every week [/blasphemy]
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Mario W.

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Message 112061 - Posted: 8 Feb 2025, 13:31:07 UTC
Last modified: 8 Feb 2025, 13:31:37 UTC

While starting Rosetta after a While and i want to show the Graphics this Window Pops up?
https://imgur.com/a/zK3pjiL

Im confused, since when i need to buy a License for Rosetta to let it run?

How ever, it seems that i have some new Tasks to run...
(Overall 27 new Tasks, but im still confused about this Message)
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kotenok2000
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Message 112062 - Posted: 8 Feb 2025, 13:36:24 UTC

Graphics should appear in separate window.
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Stevie G

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Message 112064 - Posted: 9 Feb 2025, 15:40:27 UTC - in response to Message 112049.  

Having multiple Computation Error a few seconds into running Rosetta Beta application (6 in 33 tasks just downloaded). BOINC log indicates "Output file xxx for task yyy absent". System kernel log showed no filesystem error and likes.
Probably these tasks are just buggy?


Of the 20 most recent Rosetta Beta tasks on my Windows 11 machine, seven were Errors While Computing.

SGaber
Oldsmar, FL
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Message boards : Number crunching : Problems and Technical Issues with Rosetta@home



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