Problems and Technical Issues with Rosetta@home

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Profile [VENETO] boboviz

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Message 109496 - Posted: 30 Jul 2024, 9:50:28 UTC - in response to Message 109495.  

I think it was somewhere around June 2017
Does that match those software versions?

Roughly.
Ubuntu Server 16.04 was released on 21 April 2016.


A long time ago in a galaxy far, far away....
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Chooka
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Message 109498 - Posted: 30 Jul 2024, 18:54:00 UTC

Just switch to WCG while you wait. (or any other BOINC project)
Problem solved :)

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Jean-David Beyer

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Message 109499 - Posted: 30 Jul 2024, 20:24:35 UTC - in response to Message 109498.  

Just switch to WCG while you wait. (or any other BOINC project)
Problem solved :)


Denis has no work.
CPDN has no work for Linux machines.
WCG has work from time to time only for MCM1, but not the other four projects they pretend to support.
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kotenok2000
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Message 109500 - Posted: 30 Jul 2024, 21:37:22 UTC

GPUGrid doesn't have work for Windows.
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Chooka
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Message 109502 - Posted: 31 Jul 2024, 18:56:38 UTC - in response to Message 109499.  

And I see one of our favourites, Universe@Home has also been down for a long time.

Guess it's MCM then which is what I'm onto now.

What about LHC if space is your thing? I don't run Linux so a VM is the hassle for me there.

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Profile Gary Wyckoff
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Message 109503 - Posted: 31 Jul 2024, 23:52:52 UTC - in response to Message 109502.  

I run LHC using VirtualBox - the free version.
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Profile Gary Wyckoff
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Message 109504 - Posted: 31 Jul 2024, 23:52:54 UTC - in response to Message 109502.  

I run LHC using VirtualBox - the free version.
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CLIFF HANGER

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Message 109506 - Posted: 1 Aug 2024, 18:28:59 UTC

Haven't received any work units for two or three weeks now , what's up with that?
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Message 109508 - Posted: 1 Aug 2024, 21:46:22 UTC - in response to Message 109506.  

Haven't received any work units for two or three weeks now , what's up with that?


Rosetta is no longer consistent with work. They use their AI for most stuff now. So it's hit and miss here.
You can find other tasks related to bio science if you look.
DENIS@home is about a very technical model that has to do with heart function.
SiDock is a drug exploration project. They are working on something for Ebola now.
GPU Grid is a medical project as well.


Outside of BOINC you can try folding at home. They get work from universities who take models from Baker Lab, not necessarily stuff we have worked on.

I think the rest keep it in house for doing their research.

What's left here is astronomy, physics and high level math as you are already attached to a few of them.
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Profile Grant (SSSF)

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Message 109509 - Posted: 1 Aug 2024, 22:22:00 UTC - in response to Message 109506.  
Last modified: 1 Aug 2024, 22:30:13 UTC

Haven't received any work units for two or three weeks now , what's up with that?
18/07 was the last day of work being available. Late on the 23/07 several servers crashed/went MIA & they remain that way to this day (Although i have notice the amount of spam posts here is picking up.).
This is after one particular server was crashing pretty much weekly for hours (sometimes days) at a time before being brought back up.

There's been no signs of life at Ralph since 10/07. Still waiting on an updated application & data to test.
Grant
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CLIFF HANGER

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Message 109510 - Posted: 1 Aug 2024, 23:52:40 UTC - in response to Message 109509.  

Thanks for the info....
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hadron

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Message 109511 - Posted: 2 Aug 2024, 11:19:17 UTC - in response to Message 109506.  

Haven't received any work units for two or three weeks now , what's up with that?

You haven't found the Boinc log file, or what?
If you would read that file, you would find this:

Fri 02 Aug 2024 04:53:12 AM | Rosetta@home | Scheduler request completed: got 0 new tasks
Fri 02 Aug 2024 04:53:12 AM | Rosetta@home | Project is temporarily shut down for maintenance

It will be back when it's back.
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gameelkhan

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Message 109513 - Posted: 2 Aug 2024, 12:14:41 UTC

Haven't received any work units for two or three weeks now , what's up with that?

You haven't found the Boinc log file, or what?
If you would read that file, you would find this:

Fri 02 Aug 2024 04:53:12 AM | Rosetta@home | Scheduler request completed: got 0 new tasks
Fri 02 Aug 2024 04:53:12 AM | Rosetta@home | Project is temporarily shut down for maintenance

It will be back when it's back.
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Profile Greg_BE
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Message 109515 - Posted: 2 Aug 2024, 18:46:35 UTC - in response to Message 109509.  

I think Ralph is DOA.
As far as spam goes, there is no moderator to speak of here.
When was the last time any one (Dr. B or a staff member) or a staff member posted anything here regarding the project? Seems to me they just put this on the back burner and if there is something that they don't want to run on their fancy system, they send it here.

Server page hasn't changed in 48 hrs:

Upload server boinc.bakerlab.org Running
Scheduler bwsrv1 Not Running

Status of remote daemons is missing

Tasks ready to send 0 <-- has been for weeks
Tasks in progress 163 <-- hasn't changed in 48 hours
Workunits waiting for validation 0
Workunits waiting for assimilation 0
Workunits waiting for file deletion 2
Tasks waiting for file deletion 1
Transitioner backlog (hours) 239.27 <--- What is this device?
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Profile Greg_BE
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Message 109516 - Posted: 2 Aug 2024, 18:50:56 UTC

From Baker Lab Robetta page (this feed Rosetta): June 28, 2024 - We are currently having issues with high memory RoseTTAFold jobs (aa >= 700) and instability in the CM sequence alignment pipeline and are looking into possible causes. Sorry for any inconvenience.
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Profile Greg_BE
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Message 109517 - Posted: 2 Aug 2024, 19:09:14 UTC - in response to Message 109510.  

Thanks for the info....


Forgot about World Community Grid. They went through a rough patch after they moved, where they had massive technical problems and so on. That's probably fixed now. But as fast as each project having work, I think its a bit like here, hit and miss on big batches of work.
I just rejoined. Mapping Cancer Markers project is active.

They had COVID research back then, but not sure if that is still something they do or just haven't bothered removing it. Each "project" is its own thing. WCG is just the host.

It's worth signing on to for now. If they run out of work then the other projects I mentioned will keep your machine busy.

If your into Astrophysics join up with Einstein to comb through data for gravitational waves. They never run out of work. LHC is particle physics. I run ATLAS (high credit) and Theory tasks. ATLAS will take 4 cores for its work.

If you want to make your system work for its power, then you sign up with Moo!Wrapper. That takes 2 CPU and 2 GPU for one task.

All these different projects will keep your system busy while you wait for stuff to show up here.
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kotenok2000
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Message 109518 - Posted: 2 Aug 2024, 19:12:52 UTC - in response to Message 109517.  

It can run even 8 cores if you install CVMFS and runc on your linux machine and enable native tasks in settings.
Unfortunately documentation is all over the place.
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Profile Grant (SSSF)

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Message 109519 - Posted: 2 Aug 2024, 21:54:20 UTC - in response to Message 109515.  

Server page hasn't changed in 48 hrs:
Try a week and a half going on 2 weeks.


Transitioner backlog (hours) 239.27 <--- What is this device?
It cleans things up.
Once completed Tasks are returned and Validated, the transitioner moves the Validated results from the master database to the main science database.
Grant
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Profile Grant (SSSF)

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Message 109520 - Posted: 2 Aug 2024, 21:59:45 UTC - in response to Message 109516.  

From Baker Lab Robetta page (this feed Rosetta): June 28, 2024 - We are currently having issues with high memory RoseTTAFold jobs (aa >= 700) and instability in the CM sequence alignment pipeline and are looking into possible causes. Sorry for any inconvenience.
That was back in June & there were 2 large releases of work after that date.
And it was about a week after the second of those releases of work that everything went down in a screaming heap.
Grant
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Jean-David Beyer

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Message 109521 - Posted: 3 Aug 2024, 3:39:40 UTC - in response to Message 109502.  

And I see one of our favourites, Universe@Home has also been down for a long time.

I dropped MilkyWay and Universe. I forget which was which. Both of them awarded way too much credit for the small amount of work done. And that was embarrassing. But that is not why I dropped them.

One of them does only GPU work now, and I refuse to run Boinc on my GPU. I think the sponsor of the other died, or something like that, and they no longer send out work.
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Message boards : Number crunching : Problems and Technical Issues with Rosetta@home



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