Problems and Technical Issues with Rosetta@home

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Profile Greg_BE
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Message 107035 - Posted: 2 Oct 2022, 16:05:04 UTC - in response to Message 107030.  
Last modified: 2 Oct 2022, 16:19:13 UTC

That's odd.
I have 8 physical 16 virtual
BOINC is told to use 95% i.e. 15 cores in order to leave one free for GPU and general purpose things.
We have had this discussion in the past already.

I have FAH running, but GPU only.

NOW Boinc has allocated 4 new slots for working on these new tasks.

First time is when I started to compose, 5 minutes later the second values are showing.

Original #1 task 39.8% 4 hrs clock time and 1:38 CPU
#2 47.9 +/- 1:13/35 Went up to 48 now
#3 47.5 +/- 57/27 Dropped to 48
#4 51.5 +/- 54/27 Went up to 52.2
#5 50.9 +/- 28/14 Dropped to 48

Only using 32% of all physical memory
Task manager shows 4.2 tasks only using only 2-5% CPU% out of BOINC managers 66-70% of the total cpu percentage.
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Message 107036 - Posted: 2 Oct 2022, 16:19:20 UTC - in response to Message 107035.  
Last modified: 2 Oct 2022, 16:20:24 UTC

To drop to 50% is very odd indeed. So you have 15 of Rosetta 4.2 tasks running at once, yes? And the 16th thread helps the GPU with Folding? Folding hasn't stolen the CPU had it? Folding often does whatever it likes and ignores what you say. I do similar things and get almost 100% usage in Rosetta. Use the task manager to find out how much % of your CPU each program is getting. With 16 threads, you should be getting about 6% usage for each Rosetta task.
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Message 107037 - Posted: 2 Oct 2022, 16:22:15 UTC

6.25
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Message 107038 - Posted: 2 Oct 2022, 16:42:38 UTC - in response to Message 107037.  

6.25
I said about 6 because the OS etc etc steals a bit.
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Message 107039 - Posted: 2 Oct 2022, 17:29:28 UTC - in response to Message 107036.  
Last modified: 2 Oct 2022, 17:32:11 UTC

To drop to 50% is very odd indeed. So you have 15 of Rosetta 4.2 tasks running at once, yes? And the 16th thread helps the GPU with Folding? Folding hasn't stolen the CPU had it? Folding often does whatever it likes and ignores what you say. I do similar things and get almost 100% usage in Rosetta. Use the task manager to find out how much % of your CPU each program is getting. With 16 threads, you should be getting about 6% usage for each Rosetta task.



Well I had a deep clean round with Wisecare and cleaned up the system and reboot.
The CPU format is 15 cores for BOINC and 1 Core everything esle (GPU support, web browsing, youtube if I am on it), etc.

BOINC is now running 1 GPU Grid, 1 Milkyway (1 CPU core for both) and 14 cores of 4.2 for a total of 15 cores BOINC

Percentages have evened out now on the new work but with the exception of the one I'm 5hrs clock time running and only 2hrs+ of CPU and only 46% CPU. Progress is only 38%
STDERR on these tasks does not offer any information.

2nd task runs at 51% CPU running 2:13/1:08 and 17.7 done
3rd task is 52% 1:58/1:02 and 15.4
4 and 5 show similar behavior

All the rest show normal behavior 30 clock and 20 cpu with 62-65%
I have one running at 94%!

I'm about ready to kill that 5hr one because all the other tasks will finish before that even gets close to finishing. Rosetta@home 4.20 Rosetta 10mer_af_hallucinated_163_6_best_SAVE_ALL_OUT_2918052_367_0 05:15:14 (02:32:10) 48.2 41.242 04:42:02 10/5/2022 1:45:59 PM Running 273.99 MB 249.61 MB DESKTOP-LFM92VN [14] 00:00:12



This comes from Boinc Tasks
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Message 107040 - Posted: 2 Oct 2022, 17:34:33 UTC - in response to Message 107039.  

Do you run python workunits for gpugrid? Python workunits use several cpu cores to run python machine learning environment, so conflict with cpu workunits.
For gpugrid you can tail wrapper_run.out file.
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Message 107041 - Posted: 2 Oct 2022, 17:46:18 UTC - in response to Message 107039.  

There's something terribly wrong with your system if you're getting 16 things getting half a core each when you have 16 cores.
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Message 107042 - Posted: 2 Oct 2022, 19:26:38 UTC - in response to Message 107040.  
Last modified: 2 Oct 2022, 19:31:29 UTC

Do you run python workunits for gpugrid? Python workunits use several cpu cores to run python machine learning environment, so conflict with cpu workunits.
For gpugrid you can tail wrapper_run.out file.



Well that's interesting...in task manager there is 1 python that uses about 29.x% max and goes down to 16%
And slew...I can't count..maybe 30 processes but only 0.1% each. So that grabs what...31% or something?

I had a look while suspending GPU. While it takes them out of the system resources, BOINC does not change anything with RAH%.

I have WCG running on GPU, but nothing else besides FAH is running GPU.

So it really doesn't look like python is affecting anything.
I'll run the task out and put that project as no new tasks and see what happens.
Due to energy costs, I can not run this system like I used to. So there will be a delay in getting started again. (10 hrs or more but less than a day)
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Message 107043 - Posted: 2 Oct 2022, 19:42:35 UTC

Is there any CPU time free in task manager? If yes, something very weird is wrong. If no, get rid of whatever is using it up.
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Message 107044 - Posted: 2 Oct 2022, 20:34:34 UTC - in response to Message 107043.  

Is there any CPU time free in task manager? If yes, something very weird is wrong. If no, get rid of whatever is using it up.



I killed some non windows stuff that I don't use that is in the background.
It did not make any difference.
I'll try a "repair" of BOINC and see if that does anything, otherwise tomorrow night (Eu time) I'll start up again and see what happens.
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Message 107045 - Posted: 2 Oct 2022, 20:39:34 UTC

Show us what you see in your task manager. What is the free % CPU usage? What CPU usage does each Rosetta task get? We can't help you if you give no information.
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Message 107046 - Posted: 2 Oct 2022, 22:21:20 UTC - in response to Message 107045.  

Show us what you see in your task manager. What is the free % CPU usage? What CPU usage does each Rosetta task get? We can't help you if you give no information.



Well one thing I need to do is disable that MS Edge at startup. I just read about that.
Other things were from MSI (the MB) and I don't recall what else.
The others were all windows processes.

How do I post a picture here?
That's one thing I have never figured out.

I'll see you guys tomorrow night...one task has reported. 8 hours clock for 6 hours run.
https://boinc.bakerlab.org/rosetta/result.php?resultid=1495336328
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Message 107047 - Posted: 2 Oct 2022, 22:23:56 UTC - in response to Message 107046.  
Last modified: 2 Oct 2022, 22:25:04 UTC

Upload it on imgur and then hotlink with img tag
[img] [/img]
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Message 107050 - Posted: 3 Oct 2022, 16:38:29 UTC - in response to Message 107047.  

Upload it on imgur and then hotlink with img tag
[img] [/img]



Just tried that both with login and nonlogin to imgur.
It just shows a broken picture logo here.
Tried manual typing and the hot buttons.
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Message 107051 - Posted: 3 Oct 2022, 16:41:31 UTC - in response to Message 107050.  
Last modified: 3 Oct 2022, 16:50:01 UTC

You should rmb click on uploaded image and then press copy image url.
What does "C:\programdata\BOINC\slots\gpugrid slot\wrapper_run.out" contain?
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Message 107052 - Posted: 3 Oct 2022, 17:01:01 UTC - in response to Message 107051.  
Last modified: 3 Oct 2022, 17:02:40 UTC

You should rmb click on uploaded image and then press copy image url.
What does "C:\programdata\BOINC\slots\gpugrid slot\wrapper_run.out" contain?



Nothing, because that specific folder does not exist in programdata and a search for wrapper_run.out produces nothing. The search term "wrapper" does not produce anything.
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Message 107053 - Posted: 3 Oct 2022, 17:03:17 UTC - in response to Message 107052.  
Last modified: 3 Oct 2022, 17:03:28 UTC

What do wrapper_run.out and stderr.txt files in gpugrid workunit slot directory contain?
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Message 107055 - Posted: 3 Oct 2022, 17:05:36 UTC



So this is Boinctasks readout
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Message 107057 - Posted: 3 Oct 2022, 17:08:00 UTC
Last modified: 3 Oct 2022, 17:09:43 UTC

You need to click the three dots at the top right of your photo in imgur, then "get share links". Use the one that says "BBCode (Forums)" which is a URL encased in square brackets and img markers. Just paste that in here.
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Message 107058 - Posted: 3 Oct 2022, 17:08:18 UTC - in response to Message 107053.  

What do wrapper_run.out and stderr.txt files in gpugrid workunit slot directory contain?

22:32:24 (13244): wrapper (7.9.26016): starting
22:32:24 (13244): wrapper: running .7za.exe (x pythongpu_windows_x86_64__cuda1131.tar.gz)

7-Zip (A) 9.20 Copyright (c) 1999-2010 Igor Pavlov 2010-11-18

Processing archive: pythongpu_windows_x86_64__cuda1131.tar.gz

Extracting pythongpu_windows_x86_64__cuda1131.tar

Everything is Ok

Size: 5888430080
Compressed: 2863388979
22:33:35 (13244): .7za.exe exited; CPU time 53.765625
22:33:35 (13244): wrapper: running .7za.exe (x pythongpu_windows_x86_64__cuda1131.tar -y)

7-Zip (A) 9.20 Copyright (c) 1999-2010 Igor Pavlov 2010-11-18

Processing archive: pythongpu_windows_x86_64__cuda1131.tar

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