Message boards : Number crunching : Minirosetta 1.98
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Sid Celery Send message Joined: 11 Feb 08 Posts: 2106 Credit: 40,933,658 RAC: 18,058 |
Over the last week I've had no errors at all. That's the second week running. Well done again guys. Boinc 6.6.38 Processor: 4 AuthenticAMD AMD Phenom(tm) 9850 Quad-Core Processor [AMD64 Family 16 Model 2 Stepping 3] OS: Microsoft Windows Vista: Home Premium x64 Edition, Service Pack 2, (06.00.6002.00) Memory: 8.00 GB physical, 17.52 GB virtual |
Evan Send message Joined: 23 Dec 05 Posts: 268 Credit: 402,585 RAC: 0 |
Over the last week I've had no errors at all. That's the second week running. Well done again guys. Yes, seconded! My last error report was an exception to the norm. |
der_Day Send message Joined: 17 Apr 08 Posts: 1 Credit: 3,000,504 RAC: 6,442 |
I've a lot of problems since friday. Most of my WUs broke after a few seconds, some produced an error message: Unhandled Exception Detected... - Unhandled Exception Record - Reason: Access Violation (0xc0000005) at address 0x7C9201B3 write attempt to address 0x00BD97B2 See mega_lr8_seq_score12_rlbd_2hbo_IGNORE_THE_REST_DECOY_15198_2497 or mega_lr10_seq_score12_rlbd_1vkk_IGNORE_THE_REST_DECOY_15197_2829_0 Sometimes my wingmen can finish the WU, sometimes they fail too. What I've to do?? |
Evan Send message Joined: 23 Dec 05 Posts: 268 Credit: 402,585 RAC: 0 |
Yes, seconded! My last error report was an exception to the norm. Oh dear, I talked too soon! symm_lr8_seq_score12_ss_1.7_rlbd_1ttz_IGNORE_THE_REST_DECOY_14923_2951 ERROR: !core::conformation::symmetry::is_symmetric( pose ) ERROR:: Exit from: ....srccoreoptimizationAtomTreeMinimizer.cc line: 55 BOINC:: Error reading and gzipping output datafile: default.out called boinc_finish |
Sid Celery Send message Joined: 11 Feb 08 Posts: 2106 Credit: 40,933,658 RAC: 18,058 |
Oh dear, I talked too soon! As did I... symm_lr8_seq_score12_ss_1.7_rlbd_1h75_IGNORE_THE_REST_DECOY_14923_3191_1 |
Nosferatu* Send message Joined: 27 Nov 05 Posts: 1 Credit: 1,004,857 RAC: 0 |
Don't know quite where to post this but since the change to 1.98 all workunits result in Computation error. 5.98 is running just fine as are all other projects in boinc. |
zibou Send message Joined: 9 Sep 09 Posts: 2 Credit: 672,998 RAC: 0 |
I have two different behaviour with the 1.98: - On Windows XP, units fail after 5 minutes, calculation error. - On Windows 2000, units run for 9 hours (my patience was over, normally 3), the percentage completed is still at 0%, and the time remaining does not move from the initial value. It does not let other projects with any time to run. Restarting Boinc manager resets the clock to zero, and it starts all over again with the same behaviour. I had to suspend the project until further fix. |
spiceyux Send message Joined: 9 Nov 05 Posts: 1 Credit: 10,155,875 RAC: 1,209 |
Don't know quite where to post this but since the change to 1.98 all workunits result in Computation error. 5.98 is running just fine as are all other projects in boinc. Just seconding this, I'm having the same behavior. Please advise if there is anything that I can report to help diagnose. |
borg Send message Joined: 4 Dec 07 Posts: 3 Credit: 142,556 RAC: 0 |
21.10.2009 9:14:49 rosetta@home Task lr8_A_seq_score12_shake_ss1.7_rlbd_1c8c_IGNORE_THE_REST_DECOY_14949_3992_0 exited with zero status but no 'finished' file 21.10.2009 9:14:49 rosetta@home If this happens repeatedly you may need to reset the project. This was happening repeatedly. Finally I aborted the task. |
AM Send message Joined: 15 Jul 06 Posts: 7 Credit: 522,822 RAC: 91 |
This and other mini 1.98 WU's have been resource hogs lately. https://boinc.bakerlab.org/rosetta/result.php?resultid=287892484 |
googloo Send message Joined: 15 Sep 06 Posts: 133 Credit: 22,619,659 RAC: 5,614 |
FYI I aborted this one: https://boinc.bakerlab.org/rosetta/result.php?resultid=289747880 because it had run nearly 30 minutes with 0% completed. FWIW, my wingman had a Compute Error; see https://boinc.bakerlab.org/rosetta/workunit.php?wuid=264327534 |
bradipopitt Send message Joined: 4 Mar 06 Posts: 1 Credit: 1,096,654 RAC: 0 |
Hej there, I cannot run the new version anymore. I always get such an error: <core_client_version>6.6.38</core_client_version> <![CDATA[ <message> - exit code -1073741819 (0xc0000005) </message> <stderr_txt> [2009-10-23 9:33: 1:] :: BOINC:: Initializing ... ok. [2009-10-23 9:33: 1:] :: BOINC :: boinc_init() BOINC:: Setting up shared resources ... ok. BOINC:: Setting up semaphores ... ok. BOINC:: Updating status ... ok. BOINC:: Registering timer callback... ok. BOINC:: Worker initialized successfully. Registering options.. Unhandled Exception Detected... - Unhandled Exception Record - Reason: Access Violation (0xc0000005) at address 0x7C9101B3 write attempt to address 0x00BD0DA2 Engaging BOINC Windows Runtime Debugger... Unhandled Exception Detected... - Unhandled Exception Record - Reason: Access Violation (0xc0000005) at address 0x7C9101B3 write attempt to address 0x0045E5AE Engaging BOINC Windows Runtime Debugger... </stderr_txt> ]]> Do you have any idea to overcome it? For the moment I just run Rosetta beta. good weekend |
Speedy Send message Joined: 25 Sep 05 Posts: 163 Credit: 808,098 RAC: 0 |
https://boinc.bakerlab.org/rosetta/result.php?resultid=289275155 Gave a compute error after running for roughly 1hr 06min 3812.641 seconds. This is a lr8 task task ID 289275155 Have a crunching good day!! |
Cesium_133* Send message Joined: 1 Dec 08 Posts: 28 Credit: 225,332 RAC: 0 |
I'll join the chorus on error-halted WU's (I assume this is the place to give notice about such things) : symm_lr8_seq_score12_ss_1.7_rlbd_1npu_IGNORE_THE_REST_DECOY_14923_2726_0 Computation error after 1m 13s... If this isn't the venue to report such glitches, though it seems to be, please let me know :) Incidentally, what % of WU's are found to be corrupted/abortive/unfinishable, and can they be rehabilitated for purposes of this project? :) The inquiring layman's mind wishes to know... :) The lovely lady you see isn't I, but Hayley Westenra, a classical crossover singer from Christchurch, NZ. There is no known voice as hers. Check her out- she's seraphic. |
macko Send message Joined: 25 Jun 09 Posts: 32 Credit: 153,495 RAC: 0 |
Second chance for this one also proved a failure: Hi Similar error with this: https://boinc.bakerlab.org/rosetta/workunit.php?wuid=263361396 Exception: failure to read decoy F_00023_0001585_0 from silent-file lr8_1lou.out CPU time 15.23438 And a different one with these: https://boinc.bakerlab.org/rosetta/workunit.php?wuid=263361627 Unhandled Exception Detected... - Unhandled Exception Record - Reason: Access Violation (0xc0000005) at address 0x00436BD8 read attempt to address 0x018BD000 Engaging BOINC Windows Runtime Debugger... https://boinc.bakerlab.org/rosetta/workunit.php?wuid=263361627 Unhandled Exception Detected... - Unhandled Exception Record - Reason: Access Violation (0xc0000005) at address 0x00436BD8 read attempt to address 0x018BD000 Engaging BOINC Windows Runtime Debugger... After these 3 the program runs normal |
P . P . L . Send message Joined: 20 Aug 06 Posts: 581 Credit: 4,865,274 RAC: 0 |
This one failed many times. https://boinc.bakerlab.org/rosetta/workunit.php?wuid=262741617 Sun 25 Oct 2009 15:25:52 EST|rosetta@home|Output file lr8_score12_run03_rlbd_1ugh_IGNORE_THE_REST_DECOY_14712_835_2_0 for task absent <message> process exited with code 1 (0x1, -255) </message> ERROR: Illegal attempt to score with non-identical atom set between pose and etable ERROR:: Exit from: src/core/scoring/etable/EtableEnergy.cc line: 72 BOINC:: Error reading and gzipping output datafile: default.out called boinc_finish |
Sid Celery Send message Joined: 11 Feb 08 Posts: 2106 Credit: 40,933,658 RAC: 18,058 |
Just one failure this week, but one with some errors I haven't seen reported before: symm_lr8_seq_score12_A_rlbd_1lou_IGNORE_THE_REST_DECOY_14880_3610_0 Outcome Client error Many, many more errors of a similar type before it closes down after 3 seconds Edit: wingman errored out after 11 seconds but with very different errors reported. Best to take a look yourself. Well beyond me. |
Mike Send message Joined: 28 Jun 09 Posts: 1 Credit: 688,633 RAC: 0 |
I found the following error when I returned to my computer this afternoon: Unhandled exception at 0x7c9101b3 in minirosetta_1.98_windows_intelx86.exe: 0xC0000005: Access violation writing location 0x00450eb Actually I got a dialog offering to run the Visual Studio debugger, (BOINC is running on a development machine) and this is what the debugger identified as the error. This has happened twice before, possibly in the same work unit. Addendum - this happens whenever the work unit runs - aborting it Work Unit: symm_lr13_seq_score12_A_rlbd_1bkr_IGNORE_THE_REST_DECOY_15334_130_1 Environment: OS: Windows XP Professional Service Pack 3 Processor: Intel Core2 CPU 6420@ 2.13GHz (2 CPUs) Memory: 3584MB RAM Page File: 2359MB used, 6421MB available 1. Do you want more debugging info if it happens again? 2. Should I abort the work unit? -- Mike -- |
D.J.Lankenau Send message Joined: 26 May 06 Posts: 1 Credit: 614,744 RAC: 0 |
I would like to know if there is a way to avoid units that run under 1.98. Not only am I loosing houres of crunching time for R@H but all other projects are being affected. At present I am manually aborting all 1.98 units but this is a hit and miss operation. The alternative is to suspend R@H until the problem is fixed. Please advise Doug Lankenau |
Cesium_133* Send message Joined: 1 Dec 08 Posts: 28 Credit: 225,332 RAC: 0 |
Not only am I losing houres of crunching time for R@H but all other projects are being affected. Happened to me too a while back... it's why I walked away from Rosetta and went to POEM. Their WU's don't foul up. I gave Rosetta time to fix their issues, and while my experience hasn't been as bad as the last poster, I have had 2-3 comp error aborts. Also, the graphics for 1.98 often won't show when prompted, a symptom of troubles generally in the code. The alternative is to suspend R@H until the problem is fixed. Managers of R@H, take note of that last line. The original poster, joined by myself, just said a mouthful... we value the use of our flops! The lovely lady you see isn't I, but Hayley Westenra, a classical crossover singer from Christchurch, NZ. There is no known voice as hers. Check her out- she's seraphic. |
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Number crunching :
Minirosetta 1.98
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